RNA–Protein interactions for RNA: ENST00000533368.1

FNTA-211, Transcript of farnesyltransferase, CAAX box, alpha, humanhuman

TSL 2

Gene FNTA, Length 534 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNTA-211ENST00000533368 MACF1Q9UPN3 7388 aaKnown RBP4.38□□□□□ -1.71
FNTA-211ENST00000533368 KRTAP19-5Q3LI72 72 aa4.33□□□□□ -1.72
FNTA-211ENST00000533368 KRTAP12-3P60328 96 aa4.32□□□□□ -1.72
FNTA-211ENST00000533368 KRTAP4-11Q9BYQ6 195 aa4.32□□□□□ -1.72
FNTA-211ENST00000533368 KRTAP19-7Q3SYF9 63 aa4.27□□□□□ -1.73
FNTA-211ENST00000533368 SYNE2Q8WXH0 6885 aaKnown RBP4.25□□□□□ -1.73
FNTA-211ENST00000533368 SPRR2FQ96RM1 72 aa4.25□□□□□ -1.73
FNTA-211ENST00000533368 MT1EP04732 61 aa4.22□□□□□ -1.73
FNTA-211ENST00000533368 KRTAP6-3Q3LI67 103 aa4.22□□□□□ -1.73
FNTA-211ENST00000533368 KRTAP19-4Q3LI73 84 aa4.22□□□□□ -1.73
FNTA-211ENST00000533368 KRTAP5-9P26371 169 aa4.21□□□□□ -1.74
FNTA-211ENST00000533368 KRTAP15-1Q3LI76 137 aa4.2□□□□□ -1.74
FNTA-211ENST00000533368 KRTAP9-7A8MTY7 169 aa4.14□□□□□ -1.75
FNTA-211ENST00000533368 MUC12Q9UKN1 5478 aa4.14□□□□□ -1.75
FNTA-211ENST00000533368 MT1LQ93083 61 aa4.12□□□□□ -1.75
FNTA-211ENST00000533368 KRTAP19-3Q7Z4W3 81 aa4.1□□□□□ -1.75
FNTA-211ENST00000533368 SPRR2EP22531 72 aa4.07□□□□□ -1.76
FNTA-211ENST00000533368 SPRR2BP35325 72 aa4.07□□□□□ -1.76
FNTA-211ENST00000533368 SPRR2AP35326 72 aa4.07□□□□□ -1.76
FNTA-211ENST00000533368 MT1GP13640 62 aa4.06□□□□□ -1.76
FNTA-211ENST00000533368 MDN1Q9NU22 5596 aa4.06□□□□□ -1.76
FNTA-211ENST00000533368 LCE1AQ5T7P2 110 aa4.05□□□□□ -1.76
FNTA-211ENST00000533368 LCE4AQ5TA78 99 aa4.03□□□□□ -1.76
FNTA-211ENST00000533368 LCE3CQ5T5A8 94 aa4.02□□□□□ -1.77
FNTA-211ENST00000533368 LCE5AQ5TCM9 118 aa4.02□□□□□ -1.77
FNTA-211ENST00000533368 MT1MQ8N339 61 aa3.99□□□□□ -1.77
FNTA-211ENST00000533368 NEBP20929 6669 aa3.97□□□□□ -1.77
FNTA-211ENST00000533368 SPRR2DP22532 72 aa3.93□□□□□ -1.78
FNTA-211ENST00000533368 SPRR5A0A1B0GTR4 108 aa3.88□□□□□ -1.79
FNTA-211ENST00000533368 KRTAP4-3Q9BYR4 195 aa3.87□□□□□ -1.79
FNTA-211ENST00000533368 A0A0A0MQY5 61 aa3.83□□□□□ -1.8
FNTA-211ENST00000533368 LUZP6Q538Z0 58 aa3.79□□□□□ -1.8
FNTA-211ENST00000533368 KRTAP9-6A8MVA2 160 aa3.74□□□□□ -1.81
FNTA-211ENST00000533368 KRTAP2-3P0C7H8 128 aa3.72□□□□□ -1.81
FNTA-211ENST00000533368 KRTAP2-4Q9BYR9 128 aa3.72□□□□□ -1.81
FNTA-211ENST00000533368 DSTQ03001 7570 aaKnown RBP3.71□□□□□ -1.82
FNTA-211ENST00000533368 KRTAP20-1Q3LI63 56 aa3.69□□□□□ -1.82
FNTA-211ENST00000533368 KRTAP2-2Q9BYT5 123 aa3.64□□□□□ -1.83
FNTA-211ENST00000533368 KRTAP2-1Q9BYU5 128 aa3.64□□□□□ -1.83
FNTA-211ENST00000533368 KRTAP5-5Q701N2 237 aaPredicted RBP3.58□□□□□ -1.84
FNTA-211ENST00000533368 NDUFAF8A1L188 74 aa3.55□□□□□ -1.84
FNTA-211ENST00000533368 MT1AP04731 61 aa3.51□□□□□ -1.85
FNTA-211ENST00000533368 KRTAP5-4Q6L8H1 288 aa3.48□□□□□ -1.85
FNTA-211ENST00000533368 KRTAP6-1Q3LI64 71 aa3.46□□□□□ -1.86
FNTA-211ENST00000533368 KRTAP12-4P60329 112 aa3.43□□□□□ -1.86
FNTA-211ENST00000533368 MT4P47944 62 aa3.4□□□□□ -1.87
FNTA-211ENST00000533368 SYNE1Q8NF91 8797 aaKnown RBP3.36□□□□□ -1.87
FNTA-211ENST00000533368 HMCN1Q96RW7 5635 aa3.3□□□□□ -1.88
FNTA-211ENST00000533368 KRTAP20-2Q3LI61 65 aa3.27□□□□□ -1.89
FNTA-211ENST00000533368 KRTAP6-2Q3LI66 62 aa3.23□□□□□ -1.89
FNTA-211ENST00000533368 MT3P25713 68 aa3.21□□□□□ -1.9
FNTA-211ENST00000533368 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.2□□□□□ -1.9
FNTA-211ENST00000533368 KRTAP5-2Q701N4 177 aa3.14□□□□□ -1.91
FNTA-211ENST00000533368 LCE3DQ9BYE3 92 aa3.01□□□□□ -1.93
FNTA-211ENST00000533368 AHNAK2Q8IVF2 5795 aa3□□□□□ -1.93
FNTA-211ENST00000533368 INE1O15225 51 aa2.96□□□□□ -1.94
FNTA-211ENST00000533368 KRTAP5-11Q6L8G4 156 aa2.93□□□□□ -1.94
FNTA-211ENST00000533368 LCE3EQ5T5B0 92 aa2.92□□□□□ -1.94
FNTA-211ENST00000533368 OBSCNQ5VST9 7968 aa2.88□□□□□ -1.95
FNTA-211ENST00000533368 GPR98Q8WXG9 6306 aa2.85□□□□□ -1.95
FNTA-211ENST00000533368 KRTAP5-10Q6L8G5 202 aa2.84□□□□□ -1.95
FNTA-211ENST00000533368 LCE1EQ5T753 118 aa2.81□□□□□ -1.96
FNTA-211ENST00000533368 KRTAP5-8O75690 187 aa2.74□□□□□ -1.97
FNTA-211ENST00000533368 KRTAP5-1Q6L8H4 278 aa2.72□□□□□ -1.97
FNTA-211ENST00000533368 KRTAP4-4Q9BYR3 166 aa2.67□□□□□ -1.98
FNTA-211ENST00000533368 MUC5ACP98088 5654 aa2.66□□□□□ -1.98
FNTA-211ENST00000533368 KRTAP5-7Q6L8G8 165 aa2.66□□□□□ -1.98
FNTA-211ENST00000533368 LCE1FQ5T754 118 aa2.64□□□□□ -1.99
FNTA-211ENST00000533368 LCE1BQ5T7P3 118 aa2.64□□□□□ -1.99
FNTA-211ENST00000533368 LCE1CQ5T751 118 aa2.61□□□□□ -1.99
FNTA-211ENST00000533368 PRM1P04553 51 aa2.48□□□□□ -2.01
FNTA-211ENST00000533368 MUC5BQ9HC84 5762 aaPredicted RBP2.39□□□□□ -2.03
FNTA-211ENST00000533368 AHNAKQ09666 5890 aaKnown RBP2.33□□□□□ -2.04
FNTA-211ENST00000533368 KRTAP21-2Q3LI59 83 aa2.26□□□□□ -2.05
FNTA-211ENST00000533368 PHGR1C9JFL3 82 aa1.98□□□□□ -2.09
FNTA-211ENST00000533368 MUC19Q7Z5P9 8384 aa1.7□□□□□ -2.14
FNTA-211ENST00000533368 KRTAP21-1Q3LI58 79 aa1.48□□□□□ -2.17
FNTA-211ENST00000533368 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 103.5 ms