RNA–Protein interactions for RNA: ENST00000532820.5

CAPRIN1-212, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 3,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-212ENST00000532820 SYNE2Q8WXH0 6885 aaKnown RBP4.65□□□□□ -1.67
CAPRIN1-212ENST00000532820 KRTAP9-2Q9BYQ4 174 aa4.64□□□□□ -1.67
CAPRIN1-212ENST00000532820 DSTQ03001 7570 aaKnown RBP4.62□□□□□ -1.67
CAPRIN1-212ENST00000532820 KRTAP4-3Q9BYR4 195 aa4.59□□□□□ -1.67
CAPRIN1-212ENST00000532820 SPRR2FQ96RM1 72 aa4.57□□□□□ -1.68
CAPRIN1-212ENST00000532820 LOC100996750A0A140TA64 210 aa4.5□□□□□ -1.69
CAPRIN1-212ENST00000532820 KRTAP19-3Q7Z4W3 81 aa4.5□□□□□ -1.69
CAPRIN1-212ENST00000532820 CRCT1Q9UGL9 99 aa4.49□□□□□ -1.69
CAPRIN1-212ENST00000532820 MDN1Q9NU22 5596 aa4.48□□□□□ -1.69
CAPRIN1-212ENST00000532820 MT1MQ8N339 61 aa4.46□□□□□ -1.69
CAPRIN1-212ENST00000532820 MT1GP13640 62 aa4.45□□□□□ -1.7
CAPRIN1-212ENST00000532820 KRTAP19-4Q3LI73 84 aa4.41□□□□□ -1.7
CAPRIN1-212ENST00000532820 LCE5AQ5TCM9 118 aa4.37□□□□□ -1.71
CAPRIN1-212ENST00000532820 KRTAP2-3P0C7H8 128 aa4.28□□□□□ -1.72
CAPRIN1-212ENST00000532820 KRTAP2-4Q9BYR9 128 aa4.28□□□□□ -1.72
CAPRIN1-212ENST00000532820 KRTAP2-1Q9BYU5 128 aa4.28□□□□□ -1.72
CAPRIN1-212ENST00000532820 LCE1AQ5T7P2 110 aa4.25□□□□□ -1.73
CAPRIN1-212ENST00000532820 KRTAP5-9P26371 169 aa4.23□□□□□ -1.73
CAPRIN1-212ENST00000532820 SPRR2EP22531 72 aa4.22□□□□□ -1.73
CAPRIN1-212ENST00000532820 SPRR2BP35325 72 aa4.22□□□□□ -1.73
CAPRIN1-212ENST00000532820 SPRR2AP35326 72 aa4.22□□□□□ -1.73
CAPRIN1-212ENST00000532820 SYNE1Q8NF91 8797 aaKnown RBP4.16□□□□□ -1.74
CAPRIN1-212ENST00000532820 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.14□□□□□ -1.75
CAPRIN1-212ENST00000532820 KRTAP9-6A0A140TA67 174 aa4.11□□□□□ -1.75
CAPRIN1-212ENST00000532820 LCE3BQ5TA77 95 aa4.05□□□□□ -1.76
CAPRIN1-212ENST00000532820 SPRR2DP22532 72 aa4.04□□□□□ -1.76
CAPRIN1-212ENST00000532820 KRTAP6-1Q3LI64 71 aa4.03□□□□□ -1.76
CAPRIN1-212ENST00000532820 KRTAP6-3Q3LI67 103 aa4.02□□□□□ -1.77
CAPRIN1-212ENST00000532820 KRTAP4-9Q9BYQ8 210 aa3.96□□□□□ -1.78
CAPRIN1-212ENST00000532820 KRTAP5-5Q701N2 237 aaPredicted RBP3.93□□□□□ -1.78
CAPRIN1-212ENST00000532820 MT1AP04731 61 aa3.93□□□□□ -1.78
CAPRIN1-212ENST00000532820 OBSCNQ5VST9 7968 aa3.9□□□□□ -1.78
CAPRIN1-212ENST00000532820 NEBP20929 6669 aa3.84□□□□□ -1.79
CAPRIN1-212ENST00000532820 KRTAP9-7A8MTY7 169 aa3.83□□□□□ -1.8
CAPRIN1-212ENST00000532820 KRTAP12-4P60329 112 aa3.81□□□□□ -1.8
CAPRIN1-212ENST00000532820 KRTAP9-4Q9BYQ2 154 aa3.73□□□□□ -1.81
CAPRIN1-212ENST00000532820 KRTAP6-2Q3LI66 62 aa3.67□□□□□ -1.82
CAPRIN1-212ENST00000532820 LCE3DQ9BYE3 92 aa3.67□□□□□ -1.82
CAPRIN1-212ENST00000532820 MT4P47944 62 aa3.63□□□□□ -1.83
CAPRIN1-212ENST00000532820 KRTAP4-6Q9BYQ5 205 aa3.6□□□□□ -1.83
CAPRIN1-212ENST00000532820 KRTAP5-4Q6L8H1 288 aa3.58□□□□□ -1.84
CAPRIN1-212ENST00000532820 LCE3EQ5T5B0 92 aa3.57□□□□□ -1.84
CAPRIN1-212ENST00000532820 MT3P25713 68 aa3.56□□□□□ -1.84
CAPRIN1-212ENST00000532820 HMCN1Q96RW7 5635 aa3.48□□□□□ -1.85
CAPRIN1-212ENST00000532820 LCE1EQ5T753 118 aa3.48□□□□□ -1.85
CAPRIN1-212ENST00000532820 MUC19Q7Z5P9 8384 aa3.45□□□□□ -1.86
CAPRIN1-212ENST00000532820 KRTAP2-2Q9BYT5 123 aa3.44□□□□□ -1.86
CAPRIN1-212ENST00000532820 KRTAP20-2Q3LI61 65 aa3.42□□□□□ -1.86
CAPRIN1-212ENST00000532820 PRM1P04553 51 aa3.42□□□□□ -1.86
CAPRIN1-212ENST00000532820 LCE1DQ5T752 114 aa3.42□□□□□ -1.86
CAPRIN1-212ENST00000532820 LCE4AQ5TA78 99 aa3.42□□□□□ -1.86
CAPRIN1-212ENST00000532820 KRTAP20-1Q3LI63 56 aa3.37□□□□□ -1.87
CAPRIN1-212ENST00000532820 KRTAP5-2Q701N4 177 aa3.28□□□□□ -1.88
CAPRIN1-212ENST00000532820 KRTAP5-3Q6L8H2 238 aa3.24□□□□□ -1.89
CAPRIN1-212ENST00000532820 LCE1BQ5T7P3 118 aa3.02□□□□□ -1.93
CAPRIN1-212ENST00000532820 MUC5ACP98088 5654 aa3.02□□□□□ -1.93
CAPRIN1-212ENST00000532820 LCE1FQ5T754 118 aa2.97□□□□□ -1.93
CAPRIN1-212ENST00000532820 KRTAP4-11Q9BYQ6 195 aa2.92□□□□□ -1.94
CAPRIN1-212ENST00000532820 KRTAP5-1Q6L8H4 278 aa2.87□□□□□ -1.95
CAPRIN1-212ENST00000532820 AHNAK2Q8IVF2 5795 aa2.84□□□□□ -1.95
CAPRIN1-212ENST00000532820 KRTAP4-2Q9BYR5 136 aa2.83□□□□□ -1.96
CAPRIN1-212ENST00000532820 KRTAP5-10Q6L8G5 202 aa2.78□□□□□ -1.96
CAPRIN1-212ENST00000532820 KRTAP5-8O75690 187 aa2.78□□□□□ -1.96
CAPRIN1-212ENST00000532820 LCE1CQ5T751 118 aa2.77□□□□□ -1.97
CAPRIN1-212ENST00000532820 MUC5BQ9HC84 5762 aaPredicted RBP2.63□□□□□ -1.99
CAPRIN1-212ENST00000532820 KRTAP5-7Q6L8G8 165 aa2.6□□□□□ -1.99
CAPRIN1-212ENST00000532820 KRTAP21-2Q3LI59 83 aa2.58□□□□□ -2
CAPRIN1-212ENST00000532820 GPR98Q8WXG9 6306 aa2.56□□□□□ -2
CAPRIN1-212ENST00000532820 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.55□□□□□ -2
CAPRIN1-212ENST00000532820 KRTAP4-4Q9BYR3 166 aa2.48□□□□□ -2.01
CAPRIN1-212ENST00000532820 KRTAP4-12Q9BQ66 201 aa2.48□□□□□ -2.01
CAPRIN1-212ENST00000532820 KRTAP9-9Q9BYP9 154 aa2.43□□□□□ -2.02
CAPRIN1-212ENST00000532820 KRTAP5-11Q6L8G4 156 aa2.4□□□□□ -2.03
CAPRIN1-212ENST00000532820 AHNAKQ09666 5890 aaKnown RBP2.12□□□□□ -2.07
CAPRIN1-212ENST00000532820 PHGR1C9JFL3 82 aa2.1□□□□□ -2.07
CAPRIN1-212ENST00000532820 KRTAP21-1Q3LI58 79 aa2.06□□□□□ -2.08
CAPRIN1-212ENST00000532820 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 97 ms