RNA–Protein interactions for RNA: ENST00000532781.1

ARID1A-208, Transcript of AT-rich interaction domain 1A, humanhuman

TSL 1 (best)

Gene ARID1A, Length 2,583 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1A-208ENST00000532781 LCE3CQ5T5A8 94 aa4.98□□□□□ -1.61
ARID1A-208ENST00000532781 MT1LQ93083 61 aa4.94□□□□□ -1.62
ARID1A-208ENST00000532781 KRTAP9-6A8MVA2 160 aa4.89□□□□□ -1.63
ARID1A-208ENST00000532781 KRTAP4-3Q9BYR4 195 aa4.86□□□□□ -1.63
ARID1A-208ENST00000532781 DSTQ03001 7570 aaKnown RBP4.85□□□□□ -1.63
ARID1A-208ENST00000532781 CRCT1Q9UGL9 99 aa4.83□□□□□ -1.64
ARID1A-208ENST00000532781 SPRR2FQ96RM1 72 aa4.82□□□□□ -1.64
ARID1A-208ENST00000532781 MDN1Q9NU22 5596 aa4.82□□□□□ -1.64
ARID1A-208ENST00000532781 LOC100996750A0A140TA64 210 aa4.74□□□□□ -1.65
ARID1A-208ENST00000532781 KRTAP19-3Q7Z4W3 81 aa4.73□□□□□ -1.65
ARID1A-208ENST00000532781 MT1MQ8N339 61 aa4.7□□□□□ -1.66
ARID1A-208ENST00000532781 MT1GP13640 62 aa4.66□□□□□ -1.66
ARID1A-208ENST00000532781 LCE5AQ5TCM9 118 aa4.62□□□□□ -1.67
ARID1A-208ENST00000532781 KRTAP5-9P26371 169 aa4.52□□□□□ -1.69
ARID1A-208ENST00000532781 LCE1AQ5T7P2 110 aa4.52□□□□□ -1.69
ARID1A-208ENST00000532781 KRTAP19-4Q3LI73 84 aa4.52□□□□□ -1.69
ARID1A-208ENST00000532781 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.48□□□□□ -1.69
ARID1A-208ENST00000532781 SPRR2EP22531 72 aa4.48□□□□□ -1.69
ARID1A-208ENST00000532781 SPRR2BP35325 72 aa4.48□□□□□ -1.69
ARID1A-208ENST00000532781 SPRR2AP35326 72 aa4.48□□□□□ -1.69
ARID1A-208ENST00000532781 KRTAP9-6A0A140TA67 174 aa4.47□□□□□ -1.69
ARID1A-208ENST00000532781 KRTAP2-3P0C7H8 128 aa4.42□□□□□ -1.7
ARID1A-208ENST00000532781 KRTAP2-4Q9BYR9 128 aa4.42□□□□□ -1.7
ARID1A-208ENST00000532781 KRTAP2-1Q9BYU5 128 aa4.42□□□□□ -1.7
ARID1A-208ENST00000532781 SYNE1Q8NF91 8797 aaKnown RBP4.37□□□□□ -1.71
ARID1A-208ENST00000532781 KRTAP6-3Q3LI67 103 aa4.3□□□□□ -1.72
ARID1A-208ENST00000532781 SPRR2DP22532 72 aa4.28□□□□□ -1.72
ARID1A-208ENST00000532781 KRTAP6-1Q3LI64 71 aa4.24□□□□□ -1.73
ARID1A-208ENST00000532781 LCE3BQ5TA77 95 aa4.23□□□□□ -1.73
ARID1A-208ENST00000532781 KRTAP5-5Q701N2 237 aaPredicted RBP4.17□□□□□ -1.74
ARID1A-208ENST00000532781 KRTAP9-7A8MTY7 169 aa4.15□□□□□ -1.75
ARID1A-208ENST00000532781 KRTAP4-9Q9BYQ8 210 aa4.15□□□□□ -1.75
ARID1A-208ENST00000532781 NEBP20929 6669 aa4.15□□□□□ -1.75
ARID1A-208ENST00000532781 MT1AP04731 61 aa4.11□□□□□ -1.75
ARID1A-208ENST00000532781 OBSCNQ5VST9 7968 aa4.05□□□□□ -1.76
ARID1A-208ENST00000532781 KRTAP2-2Q9BYT5 123 aa3.99□□□□□ -1.77
ARID1A-208ENST00000532781 KRTAP9-4Q9BYQ2 154 aa3.91□□□□□ -1.78
ARID1A-208ENST00000532781 KRTAP12-4P60329 112 aa3.89□□□□□ -1.79
ARID1A-208ENST00000532781 KRTAP6-2Q3LI66 62 aa3.86□□□□□ -1.79
ARID1A-208ENST00000532781 MT4P47944 62 aa3.85□□□□□ -1.79
ARID1A-208ENST00000532781 KRTAP4-6Q9BYQ5 205 aa3.84□□□□□ -1.79
ARID1A-208ENST00000532781 KRTAP5-4Q6L8H1 288 aa3.81□□□□□ -1.8
ARID1A-208ENST00000532781 LCE3DQ9BYE3 92 aa3.77□□□□□ -1.81
ARID1A-208ENST00000532781 HMCN1Q96RW7 5635 aa3.74□□□□□ -1.81
ARID1A-208ENST00000532781 MT3P25713 68 aa3.69□□□□□ -1.82
ARID1A-208ENST00000532781 LCE3EQ5T5B0 92 aa3.66□□□□□ -1.82
ARID1A-208ENST00000532781 LCE1DQ5T752 114 aa3.66□□□□□ -1.82
ARID1A-208ENST00000532781 KRTAP20-2Q3LI61 65 aa3.64□□□□□ -1.83
ARID1A-208ENST00000532781 KRTAP20-1Q3LI63 56 aa3.64□□□□□ -1.83
ARID1A-208ENST00000532781 LCE4AQ5TA78 99 aa3.62□□□□□ -1.83
ARID1A-208ENST00000532781 KRTAP5-2Q701N4 177 aa3.5□□□□□ -1.85
ARID1A-208ENST00000532781 KRTAP5-3Q6L8H2 238 aa3.47□□□□□ -1.85
ARID1A-208ENST00000532781 LCE1EQ5T753 118 aa3.45□□□□□ -1.86
ARID1A-208ENST00000532781 PRM1P04553 51 aa3.42□□□□□ -1.86
ARID1A-208ENST00000532781 LCE1FQ5T754 118 aa3.24□□□□□ -1.89
ARID1A-208ENST00000532781 MUC5ACP98088 5654 aa3.21□□□□□ -1.9
ARID1A-208ENST00000532781 LCE1BQ5T7P3 118 aa3.16□□□□□ -1.9
ARID1A-208ENST00000532781 AHNAK2Q8IVF2 5795 aa3.11□□□□□ -1.91
ARID1A-208ENST00000532781 KRTAP4-11Q9BYQ6 195 aa3.1□□□□□ -1.91
ARID1A-208ENST00000532781 KRTAP5-1Q6L8H4 278 aa3.06□□□□□ -1.92
ARID1A-208ENST00000532781 KRTAP4-2Q9BYR5 136 aa3.01□□□□□ -1.93
ARID1A-208ENST00000532781 KRTAP5-8O75690 187 aa2.99□□□□□ -1.93
ARID1A-208ENST00000532781 KRTAP5-10Q6L8G5 202 aa2.96□□□□□ -1.94
ARID1A-208ENST00000532781 LCE1CQ5T751 118 aa2.91□□□□□ -1.94
ARID1A-208ENST00000532781 MUC5BQ9HC84 5762 aaPredicted RBP2.83□□□□□ -1.96
ARID1A-208ENST00000532781 KRTAP5-7Q6L8G8 165 aa2.78□□□□□ -1.96
ARID1A-208ENST00000532781 GPR98Q8WXG9 6306 aa2.77□□□□□ -1.97
ARID1A-208ENST00000532781 KRTAP21-2Q3LI59 83 aa2.72□□□□□ -1.97
ARID1A-208ENST00000532781 KRTAP9-9Q9BYP9 154 aa2.71□□□□□ -1.98
ARID1A-208ENST00000532781 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.69□□□□□ -1.98
ARID1A-208ENST00000532781 KRTAP4-12Q9BQ66 201 aa2.64□□□□□ -1.99
ARID1A-208ENST00000532781 KRTAP4-4Q9BYR3 166 aa2.62□□□□□ -1.99
ARID1A-208ENST00000532781 KRTAP5-11Q6L8G4 156 aa2.54□□□□□ -2
ARID1A-208ENST00000532781 MUC19Q7Z5P9 8384 aa2.44□□□□□ -2.02
ARID1A-208ENST00000532781 KRTAP21-1Q3LI58 79 aa2.29□□□□□ -2.04
ARID1A-208ENST00000532781 AHNAKQ09666 5890 aaKnown RBP2.23□□□□□ -2.05
ARID1A-208ENST00000532781 PHGR1C9JFL3 82 aa2.22□□□□□ -2.05
ARID1A-208ENST00000532781 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 67.5 ms