RNA–Protein interactions for RNA: ENST00000532771.5

SYVN1-214, Transcript of synoviolin 1, humanhuman

TSL 3

Gene SYVN1, Length 709 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-214ENST00000532771 A0A1B0GU69 56 aa3.44□□□□□ -1.86
SYVN1-214ENST00000532771 PP632Q6XCG6 107 aa3.43□□□□□ -1.86
SYVN1-214ENST00000532771 A0A0A0MQY5 61 aa3.41□□□□□ -1.86
SYVN1-214ENST00000532771 A8MU10 97 aa3.4□□□□□ -1.87
SYVN1-214ENST00000532771 DSTQ03001 7570 aaKnown RBP3.39□□□□□ -1.87
SYVN1-214ENST00000532771 MT1MQ8N339 61 aa3.39□□□□□ -1.87
SYVN1-214ENST00000532771 MT1LQ93083 61 aa3.39□□□□□ -1.87
SYVN1-214ENST00000532771 TNP1P09430 55 aa3.36□□□□□ -1.87
SYVN1-214ENST00000532771 LCE3AQ5TA76 89 aa3.36□□□□□ -1.87
SYVN1-214ENST00000532771 ANAPC13Q9BS18 74 aa3.36□□□□□ -1.87
SYVN1-214ENST00000532771 C10orf95Q9H7T3 257 aa3.36□□□□□ -1.87
SYVN1-214ENST00000532771 GPR98Q8WXG9 6306 aa3.32□□□□□ -1.88
SYVN1-214ENST00000532771 MT4P47944 62 aa3.31□□□□□ -1.88
SYVN1-214ENST00000532771 PRR15LQ9BU68 103 aa3.31□□□□□ -1.88
SYVN1-214ENST00000532771 CCDC179H3BU77 68 aa3.3□□□□□ -1.88
SYVN1-214ENST00000532771 KRTAP4-3Q9BYR4 195 aa3.3□□□□□ -1.88
SYVN1-214ENST00000532771 ATP5EP56381 51 aaPredicted RBP3.29□□□□□ -1.88
SYVN1-214ENST00000532771 KRTAP5-4Q6L8H1 288 aa3.28□□□□□ -1.88
SYVN1-214ENST00000532771 LINC01558Q9Y6Z2 57 aa3.27□□□□□ -1.89
SYVN1-214ENST00000532771 KRTAP12-3P60328 96 aa3.24□□□□□ -1.89
SYVN1-214ENST00000532771 UQCR11O14957 56 aa3.21□□□□□ -1.9
SYVN1-214ENST00000532771 HMCN1Q96RW7 5635 aa3.2□□□□□ -1.9
SYVN1-214ENST00000532771 TMEM258P61165 79 aa3.18□□□□□ -1.9
SYVN1-214ENST00000532771 KRTAP5-10Q6L8G5 202 aa3.16□□□□□ -1.9
SYVN1-214ENST00000532771 KRTAP25-1Q3LHN0 102 aa3.14□□□□□ -1.91
SYVN1-214ENST00000532771 MIR22HGQ0VDD5 57 aa3.13□□□□□ -1.91
SYVN1-214ENST00000532771 KRTAP5-5Q701N2 237 aaPredicted RBP3.13□□□□□ -1.91
SYVN1-214ENST00000532771 KRTAP20-2Q3LI61 65 aa3.1□□□□□ -1.91
SYVN1-214ENST00000532771 AHNAK2Q8IVF2 5795 aa3.1□□□□□ -1.91
SYVN1-214ENST00000532771 SPRR5A0A1B0GTR4 108 aa3.08□□□□□ -1.92
SYVN1-214ENST00000532771 K7ERS5 55 aa3.08□□□□□ -1.92
SYVN1-214ENST00000532771 KRTAP5-3Q6L8H2 238 aa3.07□□□□□ -1.92
SYVN1-214ENST00000532771 KRTAP12-4P60329 112 aa3.05□□□□□ -1.92
SYVN1-214ENST00000532771 KRTAP5-7Q6L8G8 165 aa3.05□□□□□ -1.92
SYVN1-214ENST00000532771 V9GYY9 64 aa3.03□□□□□ -1.92
SYVN1-214ENST00000532771 PSPHP1O15172 72 aa3.02□□□□□ -1.93
SYVN1-214ENST00000532771 Q1T7F1 81 aa3□□□□□ -1.93
SYVN1-214ENST00000532771 LCE3CQ5T5A8 94 aa2.98□□□□□ -1.93
SYVN1-214ENST00000532771 SYNE1Q8NF91 8797 aaKnown RBP2.96□□□□□ -1.94
SYVN1-214ENST00000532771 A6NED7 52 aa2.91□□□□□ -1.94
SYVN1-214ENST00000532771 CDC42SE1Q9NRR8 79 aa2.91□□□□□ -1.94
SYVN1-214ENST00000532771 MT1AP04731 61 aa2.89□□□□□ -1.95
SYVN1-214ENST00000532771 MT3P25713 68 aa2.89□□□□□ -1.95
SYVN1-214ENST00000532771 KRTAP6-1Q3LI64 71 aa2.87□□□□□ -1.95
SYVN1-214ENST00000532771 KRTAP5-2Q701N4 177 aa2.87□□□□□ -1.95
SYVN1-214ENST00000532771 ROMO1P60602 79 aa2.85□□□□□ -1.95
SYVN1-214ENST00000532771 RPS28P62857 69 aaKnown RBP2.84□□□□□ -1.95
SYVN1-214ENST00000532771 PRAC1Q96KF2 57 aa2.83□□□□□ -1.96
SYVN1-214ENST00000532771 KRTAP9-6A8MVA2 160 aa2.81□□□□□ -1.96
SYVN1-214ENST00000532771 KRTAP5-8O75690 187 aa2.75□□□□□ -1.97
SYVN1-214ENST00000532771 KRTAP6-2Q3LI66 62 aa2.75□□□□□ -1.97
SYVN1-214ENST00000532771 NDUFAF8A1L188 74 aa2.74□□□□□ -1.97
SYVN1-214ENST00000532771 KRTAP5-1Q6L8H4 278 aa2.58□□□□□ -2
SYVN1-214ENST00000532771 MUC5ACP98088 5654 aa2.58□□□□□ -2
SYVN1-214ENST00000532771 OBSCNQ5VST9 7968 aa2.57□□□□□ -2
SYVN1-214ENST00000532771 LCE1FQ5T754 118 aa2.56□□□□□ -2
SYVN1-214ENST00000532771 AHNAKQ09666 5890 aaKnown RBP2.55□□□□□ -2
SYVN1-214ENST00000532771 MUC5BQ9HC84 5762 aaPredicted RBP2.53□□□□□ -2
SYVN1-214ENST00000532771 LCE1EQ5T753 118 aa2.49□□□□□ -2.01
SYVN1-214ENST00000532771 BRK1Q8WUW1 75 aa2.4□□□□□ -2.03
SYVN1-214ENST00000532771 KRTAP5-11Q6L8G4 156 aa2.38□□□□□ -2.03
SYVN1-214ENST00000532771 LCE1BQ5T7P3 118 aa2.29□□□□□ -2.04
SYVN1-214ENST00000532771 LCE1CQ5T751 118 aa2.27□□□□□ -2.05
SYVN1-214ENST00000532771 PMAIP1Q13794 54 aa2.25□□□□□ -2.05
SYVN1-214ENST00000532771 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.25□□□□□ -2.05
SYVN1-214ENST00000532771 LCE3EQ5T5B0 92 aa2.19□□□□□ -2.06
SYVN1-214ENST00000532771 PRO0628Q9UI54 55 aa2.15□□□□□ -2.07
SYVN1-214ENST00000532771 LCE3DQ9BYE3 92 aa2.13□□□□□ -2.07
SYVN1-214ENST00000532771 KTN1-AS1Q86SY8 53 aa2.03□□□□□ -2.08
SYVN1-214ENST00000532771 KRTAP21-2Q3LI59 83 aa1.9□□□□□ -2.11
SYVN1-214ENST00000532771 LUZP6Q538Z0 58 aa1.87□□□□□ -2.11
SYVN1-214ENST00000532771 KRTAP4-4Q9BYR3 166 aa1.86□□□□□ -2.11
SYVN1-214ENST00000532771 PHGR1C9JFL3 82 aa1.83□□□□□ -2.12
SYVN1-214ENST00000532771 MUC19Q7Z5P9 8384 aa1.6□□□□□ -2.15
SYVN1-214ENST00000532771 PRM1P04553 51 aa1.45□□□□□ -2.18
SYVN1-214ENST00000532771 KRTAP21-1Q3LI58 79 aa1.4□□□□□ -2.19
SYVN1-214ENST00000532771 INE1O15225 51 aa1.25□□□□□ -2.21
SYVN1-214ENST00000532771 MUC16Q8WXI7 14507 aa1.15□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 14.4 ms