RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, human

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA1-222	ENST00000532504	KRTAP4-7	Q9BYR0	210 aa		5.34	□□□□□ -1.55
PPFIA1-222	ENST00000532504	MT1E	P04732	61 aa		5.34	□□□□□ -1.55
PPFIA1-222	ENST00000532504	LCE3B	Q5TA77	95 aa		5.32	□□□□□ -1.56
PPFIA1-222	ENST00000532504	MT1L	Q93083	61 aa		5.3	□□□□□ -1.56
PPFIA1-222	ENST00000532504	KRTAP12-4	P60329	112 aa		5.3	□□□□□ -1.56
PPFIA1-222	ENST00000532504	KRTAP9-7	A8MTY7	169 aa		5.23	□□□□□ -1.57
PPFIA1-222	ENST00000532504	SYNE2	Q8WXH0	6885 aa	Known RBP	5.2	□□□□□ -1.58
PPFIA1-222	ENST00000532504	MT1M	Q8N339	61 aa		5.16	□□□□□ -1.58
PPFIA1-222	ENST00000532504	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	5.13	□□□□□ -1.59
PPFIA1-222	ENST00000532504	KRTAP4-3	Q9BYR4	195 aa		5.13	□□□□□ -1.59
PPFIA1-222	ENST00000532504	MT4	P47944	62 aa		5.11	□□□□□ -1.59
PPFIA1-222	ENST00000532504	USH2A	O75445	5202 aa		5.09	□□□□□ -1.6
PPFIA1-222	ENST00000532504	KRTAP19-7	Q3SYF9	63 aa		5.07	□□□□□ -1.6
PPFIA1-222	ENST00000532504	SYNE1	Q8NF91	8797 aa	Known RBP	5.06	□□□□□ -1.6
PPFIA1-222	ENST00000532504	KRTAP6-3	Q3LI67	103 aa		5.03	□□□□□ -1.6
PPFIA1-222	ENST00000532504	LOC100996750	A0A140TA64	210 aa		5.03	□□□□□ -1.6
PPFIA1-222	ENST00000532504	KRTAP20-1	Q3LI63	56 aa		4.97	□□□□□ -1.61
PPFIA1-222	ENST00000532504	SPRR5	A0A1B0GTR4	108 aa		4.88	□□□□□ -1.63
PPFIA1-222	ENST00000532504	MACF1	Q9UPN3	7388 aa	Known RBP	4.82	□□□□□ -1.64
PPFIA1-222	ENST00000532504	LCE3D	Q9BYE3	92 aa		4.82	□□□□□ -1.64
PPFIA1-222	ENST00000532504	LCE1A	Q5T7P2	110 aa		4.82	□□□□□ -1.64
PPFIA1-222	ENST00000532504	KRTAP2-3	P0C7H8	128 aa		4.79	□□□□□ -1.64
PPFIA1-222	ENST00000532504	KRTAP2-4	Q9BYR9	128 aa		4.79	□□□□□ -1.64
PPFIA1-222	ENST00000532504	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	4.77	□□□□□ -1.65
PPFIA1-222	ENST00000532504	KMT2D	O14686	5537 aa		4.76	□□□□□ -1.65
PPFIA1-222	ENST00000532504	SSPO	A2VEC9	5147 aa		4.76	□□□□□ -1.65
PPFIA1-222	ENST00000532504	MT3	P25713	68 aa		4.75	□□□□□ -1.65
PPFIA1-222	ENST00000532504	LCE5A	Q5TCM9	118 aa		4.71	□□□□□ -1.66
PPFIA1-222	ENST00000532504	KRTAP4-9	Q9BYQ8	210 aa		4.7	□□□□□ -1.66
PPFIA1-222	ENST00000532504	LCE3E	Q5T5B0	92 aa		4.68	□□□□□ -1.66
PPFIA1-222	ENST00000532504	DST	Q03001	7570 aa	Known RBP	4.68	□□□□□ -1.66
PPFIA1-222	ENST00000532504	KRTAP2-2	Q9BYT5	123 aa		4.65	□□□□□ -1.66
PPFIA1-222	ENST00000532504	KRTAP2-1	Q9BYU5	128 aa		4.65	□□□□□ -1.66
PPFIA1-222	ENST00000532504	MT1A	P04731	61 aa		4.65	□□□□□ -1.67
PPFIA1-222	ENST00000532504	LCE1D	Q5T752	114 aa		4.58	□□□□□ -1.68
PPFIA1-222	ENST00000532504	OBSCN	Q5VST9	7968 aa		4.56	□□□□□ -1.68
PPFIA1-222	ENST00000532504	LCE1B	Q5T7P3	118 aa		4.54	□□□□□ -1.68
PPFIA1-222	ENST00000532504	MUC12	Q9UKN1	5478 aa		4.54	□□□□□ -1.68
PPFIA1-222	ENST00000532504	KRTAP6-1	Q3LI64	71 aa		4.5	□□□□□ -1.69
PPFIA1-222	ENST00000532504	NEB	P20929	6669 aa		4.48	□□□□□ -1.69
PPFIA1-222	ENST00000532504	KRTAP9-6	A8MVA2	160 aa		4.48	□□□□□ -1.69
PPFIA1-222	ENST00000532504	LCE4A	Q5TA78	99 aa		4.47	□□□□□ -1.69
PPFIA1-222	ENST00000532504	KRTAP5-9	P26371	169 aa		4.44	□□□□□ -1.7
PPFIA1-222	ENST00000532504	KRTAP6-2	Q3LI66	62 aa		4.42	□□□□□ -1.7
PPFIA1-222	ENST00000532504	KRTAP9-4	Q9BYQ2	154 aa		4.34	□□□□□ -1.71
PPFIA1-222	ENST00000532504	MDN1	Q9NU22	5596 aa		4.32	□□□□□ -1.72
PPFIA1-222	ENST00000532504	PRM1	P04553	51 aa		4.18	□□□□□ -1.74
PPFIA1-222	ENST00000532504	KRTAP4-6	Q9BYQ5	205 aa		4.12	□□□□□ -1.75
PPFIA1-222	ENST00000532504	KRTAP20-2	Q3LI61	65 aa		3.95	□□□□□ -1.78
PPFIA1-222	ENST00000532504	GPR98	Q8WXG9	6306 aa		3.89	□□□□□ -1.79
PPFIA1-222	ENST00000532504	KRTAP9-9	Q9BYP9	154 aa		3.83	□□□□□ -1.8
PPFIA1-222	ENST00000532504	LCE1C	Q5T751	118 aa		3.78	□□□□□ -1.8
PPFIA1-222	ENST00000532504	LCE1E	Q5T753	118 aa		3.78	□□□□□ -1.8
PPFIA1-222	ENST00000532504	LCE1F	Q5T754	118 aa		3.78	□□□□□ -1.8
PPFIA1-222	ENST00000532504	KRTAP5-4	Q6L8H1	288 aa		3.7	□□□□□ -1.82
PPFIA1-222	ENST00000532504	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.6	□□□□□ -1.83
PPFIA1-222	ENST00000532504	KRTAP4-11	Q9BYQ6	195 aa		3.58	□□□□□ -1.84
PPFIA1-222	ENST00000532504	MUC19	Q7Z5P9	8384 aa		3.49	□□□□□ -1.85
PPFIA1-222	ENST00000532504	KRTAP5-3	Q6L8H2	238 aa		3.44	□□□□□ -1.86
PPFIA1-222	ENST00000532504	MUC5AC	P98088	5654 aa		3.44	□□□□□ -1.86
PPFIA1-222	ENST00000532504	KRTAP4-12	Q9BQ66	201 aa		3.41	□□□□□ -1.86
PPFIA1-222	ENST00000532504	KRTAP4-2	Q9BYR5	136 aa		3.41	□□□□□ -1.86
PPFIA1-222	ENST00000532504	HMCN1	Q96RW7	5635 aa		3.37	□□□□□ -1.87
PPFIA1-222	ENST00000532504	KRTAP4-4	Q9BYR3	166 aa		3.28	□□□□□ -1.88
PPFIA1-222	ENST00000532504	AHNAK2	Q8IVF2	5795 aa		3.22	□□□□□ -1.89
PPFIA1-222	ENST00000532504	KRTAP5-8	O75690	187 aa		3.15	□□□□□ -1.9
PPFIA1-222	ENST00000532504	KRTAP5-2	Q701N4	177 aa		3.04	□□□□□ -1.92
PPFIA1-222	ENST00000532504	AHNAK	Q09666	5890 aa	Known RBP	2.77	□□□□□ -1.97
PPFIA1-222	ENST00000532504	KRTAP5-1	Q6L8H4	278 aa		2.75	□□□□□ -1.97
PPFIA1-222	ENST00000532504	KRTAP5-10	Q6L8G5	202 aa		2.74	□□□□□ -1.97
PPFIA1-222	ENST00000532504	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.69	□□□□□ -1.98
PPFIA1-222	ENST00000532504	PHGR1	C9JFL3	82 aa		2.58	□□□□□ -2
PPFIA1-222	ENST00000532504	KRTAP5-7	Q6L8G8	165 aa		2.56	□□□□□ -2
PPFIA1-222	ENST00000532504	KRTAP5-11	Q6L8G4	156 aa		2.55	□□□□□ -2
PPFIA1-222	ENST00000532504	KRTAP21-2	Q3LI59	83 aa		2.43	□□□□□ -2.02
PPFIA1-222	ENST00000532504	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.28	□□□□□ -2.04
PPFIA1-222	ENST00000532504	KRTAP21-1	Q3LI58	79 aa		1.74	□□□□□ -2.13
PPFIA1-222	ENST00000532504	MUC16	Q8WXI7	14507 aa		1.55	□□□□□ -2.16

Retrieved 78 of 20,778 RNA–protein pairs in 94.5 ms