RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 MUC2Q02817 5179 aa2.73□□□□□ -1.97
CTNND1-230ENST00000532245 MT1EP04732 61 aa2.68□□□□□ -1.98
CTNND1-230ENST00000532245 KRTAP4-7Q9BYR0 210 aa2.68□□□□□ -1.98
CTNND1-230ENST00000532245 KRTAP9-7A8MTY7 169 aa2.68□□□□□ -1.98
CTNND1-230ENST00000532245 MT1LQ93083 61 aa2.67□□□□□ -1.98
CTNND1-230ENST00000532245 MT4P47944 62 aa2.64□□□□□ -1.99
CTNND1-230ENST00000532245 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.6□□□□□ -1.99
CTNND1-230ENST00000532245 MT1MQ8N339 61 aa2.6□□□□□ -1.99
CTNND1-230ENST00000532245 SYNE2Q8WXH0 6885 aaKnown RBP2.6□□□□□ -1.99
CTNND1-230ENST00000532245 KRTAP20-1Q3LI63 56 aa2.58□□□□□ -2
CTNND1-230ENST00000532245 KRTAP4-3Q9BYR4 195 aa2.58□□□□□ -2
CTNND1-230ENST00000532245 KRTAP6-3Q3LI67 103 aa2.56□□□□□ -2
CTNND1-230ENST00000532245 LOC100996750A0A140TA64 210 aa2.54□□□□□ -2
CTNND1-230ENST00000532245 KRTAP19-7Q3SYF9 63 aa2.51□□□□□ -2.01
CTNND1-230ENST00000532245 LCE3DQ9BYE3 92 aa2.47□□□□□ -2.01
CTNND1-230ENST00000532245 KRTAP2-3P0C7H8 128 aa2.46□□□□□ -2.01
CTNND1-230ENST00000532245 KRTAP2-4Q9BYR9 128 aa2.46□□□□□ -2.01
CTNND1-230ENST00000532245 USH2AO75445 5202 aa2.43□□□□□ -2.02
CTNND1-230ENST00000532245 MT3P25713 68 aa2.43□□□□□ -2.02
CTNND1-230ENST00000532245 LCE1AQ5T7P2 110 aa2.42□□□□□ -2.02
CTNND1-230ENST00000532245 SPRR5A0A1B0GTR4 108 aa2.42□□□□□ -2.02
CTNND1-230ENST00000532245 KRTAP4-9Q9BYQ8 210 aa2.41□□□□□ -2.02
CTNND1-230ENST00000532245 SYNE1Q8NF91 8797 aaKnown RBP2.4□□□□□ -2.02
CTNND1-230ENST00000532245 LCE3EQ5T5B0 92 aa2.39□□□□□ -2.03
CTNND1-230ENST00000532245 KRTAP2-2Q9BYT5 123 aa2.38□□□□□ -2.03
CTNND1-230ENST00000532245 KRTAP2-1Q9BYU5 128 aa2.38□□□□□ -2.03
CTNND1-230ENST00000532245 LCE1DQ5T752 114 aa2.36□□□□□ -2.03
CTNND1-230ENST00000532245 LCE5AQ5TCM9 118 aa2.35□□□□□ -2.03
CTNND1-230ENST00000532245 MACF1Q9UPN3 7388 aaKnown RBP2.35□□□□□ -2.03
CTNND1-230ENST00000532245 MT1AP04731 61 aa2.35□□□□□ -2.03
CTNND1-230ENST00000532245 LCE1BQ5T7P3 118 aa2.35□□□□□ -2.03
CTNND1-230ENST00000532245 LCE4AQ5TA78 99 aa2.3□□□□□ -2.04
CTNND1-230ENST00000532245 KMT2DO14686 5537 aa2.29□□□□□ -2.04
CTNND1-230ENST00000532245 FCGBPQ9Y6R7 5405 aaPredicted RBP2.29□□□□□ -2.04
CTNND1-230ENST00000532245 KRTAP6-1Q3LI64 71 aa2.26□□□□□ -2.05
CTNND1-230ENST00000532245 SSPOA2VEC9 5147 aa2.26□□□□□ -2.05
CTNND1-230ENST00000532245 KRTAP6-2Q3LI66 62 aa2.24□□□□□ -2.05
CTNND1-230ENST00000532245 NEBP20929 6669 aa2.24□□□□□ -2.05
CTNND1-230ENST00000532245 DSTQ03001 7570 aaKnown RBP2.23□□□□□ -2.05
CTNND1-230ENST00000532245 KRTAP5-9P26371 169 aa2.22□□□□□ -2.05
CTNND1-230ENST00000532245 OBSCNQ5VST9 7968 aa2.21□□□□□ -2.06
CTNND1-230ENST00000532245 KRTAP9-6A8MVA2 160 aa2.2□□□□□ -2.06
CTNND1-230ENST00000532245 KRTAP9-4Q9BYQ2 154 aa2.2□□□□□ -2.06
CTNND1-230ENST00000532245 MUC12Q9UKN1 5478 aa2.15□□□□□ -2.07
CTNND1-230ENST00000532245 PRM1P04553 51 aa2.14□□□□□ -2.07
CTNND1-230ENST00000532245 KRTAP4-6Q9BYQ5 205 aa2.07□□□□□ -2.08
CTNND1-230ENST00000532245 MDN1Q9NU22 5596 aa2.06□□□□□ -2.08
CTNND1-230ENST00000532245 LCE1CQ5T751 118 aa2□□□□□ -2.09
CTNND1-230ENST00000532245 LCE1EQ5T753 118 aa2□□□□□ -2.09
CTNND1-230ENST00000532245 LCE1FQ5T754 118 aa2□□□□□ -2.09
CTNND1-230ENST00000532245 KRTAP9-9Q9BYP9 154 aa2□□□□□ -2.09
CTNND1-230ENST00000532245 KRTAP20-2Q3LI61 65 aa1.99□□□□□ -2.09
CTNND1-230ENST00000532245 GPR98Q8WXG9 6306 aa1.88□□□□□ -2.11
CTNND1-230ENST00000532245 KRTAP5-4Q6L8H1 288 aa1.87□□□□□ -2.11
CTNND1-230ENST00000532245 KRTAP4-12Q9BQ66 201 aa1.84□□□□□ -2.11
CTNND1-230ENST00000532245 KRTAP4-11Q9BYQ6 195 aa1.81□□□□□ -2.12
CTNND1-230ENST00000532245 KRTAP5-5Q701N2 237 aaPredicted RBP1.77□□□□□ -2.13
CTNND1-230ENST00000532245 KRTAP4-2Q9BYR5 136 aa1.75□□□□□ -2.13
CTNND1-230ENST00000532245 KRTAP5-3Q6L8H2 238 aa1.74□□□□□ -2.13
CTNND1-230ENST00000532245 KRTAP4-4Q9BYR3 166 aa1.68□□□□□ -2.14
CTNND1-230ENST00000532245 MUC19Q7Z5P9 8384 aa1.66□□□□□ -2.14
CTNND1-230ENST00000532245 MUC5ACP98088 5654 aa1.65□□□□□ -2.15
CTNND1-230ENST00000532245 HMCN1Q96RW7 5635 aa1.63□□□□□ -2.15
CTNND1-230ENST00000532245 KRTAP5-8O75690 187 aa1.59□□□□□ -2.16
CTNND1-230ENST00000532245 AHNAK2Q8IVF2 5795 aa1.56□□□□□ -2.16
CTNND1-230ENST00000532245 KRTAP5-2Q701N4 177 aa1.49□□□□□ -2.17
CTNND1-230ENST00000532245 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.37□□□□□ -2.19
CTNND1-230ENST00000532245 KRTAP5-10Q6L8G5 202 aa1.37□□□□□ -2.19
CTNND1-230ENST00000532245 PHGR1C9JFL3 82 aa1.35□□□□□ -2.19
CTNND1-230ENST00000532245 KRTAP5-1Q6L8H4 278 aa1.35□□□□□ -2.19
CTNND1-230ENST00000532245 AHNAKQ09666 5890 aaKnown RBP1.34□□□□□ -2.2
CTNND1-230ENST00000532245 MUC5BQ9HC84 5762 aaPredicted RBP1.31□□□□□ -2.2
CTNND1-230ENST00000532245 KRTAP5-7Q6L8G8 165 aa1.29□□□□□ -2.2
CTNND1-230ENST00000532245 KRTAP5-11Q6L8G4 156 aa1.27□□□□□ -2.21
CTNND1-230ENST00000532245 KRTAP21-2Q3LI59 83 aa1.2□□□□□ -2.22
CTNND1-230ENST00000532245 KRTAP21-1Q3LI58 79 aa0.95□□□□□ -2.26
CTNND1-230ENST00000532245 MUC16Q8WXI7 14507 aa0.79□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 9.9 ms