RNA–Protein interactions for RNA: ENST00000531971.1

DDX6-204, Transcript of DEAD-box helicase 6, humanhuman

TSL 3

Gene DDX6, Length 4,373 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX6-204ENST00000531971 LCE4AQ5TA78 99 aa2.64□□□□□ -1.99
DDX6-204ENST00000531971 SYNE1Q8NF91 8797 aaKnown RBP2.63□□□□□ -1.99
DDX6-204ENST00000531971 KRTAP4-8A0A0G2JLE6 195 aa2.63□□□□□ -1.99
DDX6-204ENST00000531971 KRTAP4-8Q9BYQ9 185 aa2.63□□□□□ -1.99
DDX6-204ENST00000531971 KRTAP9-7A8MTY7 169 aa2.62□□□□□ -1.99
DDX6-204ENST00000531971 MT1GP13640 62 aa2.61□□□□□ -1.99
DDX6-204ENST00000531971 MT1EP04732 61 aa2.6□□□□□ -1.99
DDX6-204ENST00000531971 SPRR2EP22531 72 aa2.57□□□□□ -2
DDX6-204ENST00000531971 SPRR2BP35325 72 aa2.57□□□□□ -2
DDX6-204ENST00000531971 SPRR2AP35326 72 aa2.57□□□□□ -2
DDX6-204ENST00000531971 LCE1FQ5T754 118 aa2.56□□□□□ -2
DDX6-204ENST00000531971 KRTAP19-3Q7Z4W3 81 aa2.56□□□□□ -2
DDX6-204ENST00000531971 MT1LQ93083 61 aa2.56□□□□□ -2
DDX6-204ENST00000531971 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.56□□□□□ -2
DDX6-204ENST00000531971 KRTAP19-7Q3SYF9 63 aa2.54□□□□□ -2
DDX6-204ENST00000531971 LCE1AQ5T7P2 110 aa2.51□□□□□ -2.01
DDX6-204ENST00000531971 OBSCNQ5VST9 7968 aa2.5□□□□□ -2.01
DDX6-204ENST00000531971 DSTQ03001 7570 aaKnown RBP2.5□□□□□ -2.01
DDX6-204ENST00000531971 MACF1Q9UPN3 7388 aaKnown RBP2.5□□□□□ -2.01
DDX6-204ENST00000531971 SPRR2DP22532 72 aa2.49□□□□□ -2.01
DDX6-204ENST00000531971 KRTAP9-9Q9BYP9 154 aa2.49□□□□□ -2.01
DDX6-204ENST00000531971 SYNE2Q8WXH0 6885 aaKnown RBP2.48□□□□□ -2.01
DDX6-204ENST00000531971 MT1MQ8N339 61 aa2.47□□□□□ -2.01
DDX6-204ENST00000531971 KRTAP2-2Q9BYT5 123 aa2.45□□□□□ -2.02
DDX6-204ENST00000531971 KRTAP2-3P0C7H8 128 aa2.44□□□□□ -2.02
DDX6-204ENST00000531971 KRTAP2-4Q9BYR9 128 aa2.44□□□□□ -2.02
DDX6-204ENST00000531971 KRTAP2-1Q9BYU5 128 aa2.44□□□□□ -2.02
DDX6-204ENST00000531971 KMT2DO14686 5537 aa2.41□□□□□ -2.02
DDX6-204ENST00000531971 KRTAP20-1Q3LI63 56 aa2.39□□□□□ -2.03
DDX6-204ENST00000531971 LCE3EQ5T5B0 92 aa2.37□□□□□ -2.03
DDX6-204ENST00000531971 KRTAP4-7Q9BYR0 210 aa2.36□□□□□ -2.03
DDX6-204ENST00000531971 KRTAP12-4P60329 112 aa2.35□□□□□ -2.03
DDX6-204ENST00000531971 KRTAP9-6A8MVA2 160 aa2.35□□□□□ -2.03
DDX6-204ENST00000531971 FCGBPQ9Y6R7 5405 aaPredicted RBP2.34□□□□□ -2.03
DDX6-204ENST00000531971 LCE1EQ5T753 118 aa2.33□□□□□ -2.04
DDX6-204ENST00000531971 LCE3BQ5TA77 95 aa2.32□□□□□ -2.04
DDX6-204ENST00000531971 NEBP20929 6669 aa2.31□□□□□ -2.04
DDX6-204ENST00000531971 KRTAP4-3Q9BYR4 195 aa2.28□□□□□ -2.04
DDX6-204ENST00000531971 LOC100996750A0A140TA64 210 aa2.28□□□□□ -2.05
DDX6-204ENST00000531971 KRTAP4-6Q9BYQ5 205 aa2.28□□□□□ -2.05
DDX6-204ENST00000531971 GPR98Q8WXG9 6306 aa2.27□□□□□ -2.05
DDX6-204ENST00000531971 MT1AP04731 61 aa2.26□□□□□ -2.05
DDX6-204ENST00000531971 MT4P47944 62 aa2.24□□□□□ -2.05
DDX6-204ENST00000531971 KRTAP5-4Q6L8H1 288 aa2.22□□□□□ -2.05
DDX6-204ENST00000531971 LCE3DQ9BYE3 92 aa2.22□□□□□ -2.05
DDX6-204ENST00000531971 MUC19Q7Z5P9 8384 aa2.21□□□□□ -2.06
DDX6-204ENST00000531971 LCE1DQ5T752 114 aa2.2□□□□□ -2.06
DDX6-204ENST00000531971 MDN1Q9NU22 5596 aa2.17□□□□□ -2.06
DDX6-204ENST00000531971 KRTAP5-5Q701N2 237 aaPredicted RBP2.16□□□□□ -2.06
DDX6-204ENST00000531971 KRTAP6-1Q3LI64 71 aa2.11□□□□□ -2.07
DDX6-204ENST00000531971 KRTAP4-9Q9BYQ8 210 aa2.1□□□□□ -2.07
DDX6-204ENST00000531971 MUC12Q9UKN1 5478 aa2.08□□□□□ -2.08
DDX6-204ENST00000531971 KRTAP4-12Q9BQ66 201 aa2.03□□□□□ -2.08
DDX6-204ENST00000531971 KRTAP5-2Q701N4 177 aa2.01□□□□□ -2.09
DDX6-204ENST00000531971 KRTAP6-2Q3LI66 62 aa1.99□□□□□ -2.09
DDX6-204ENST00000531971 PRM1P04553 51 aa1.98□□□□□ -2.09
DDX6-204ENST00000531971 KRTAP5-3Q6L8H2 238 aa1.95□□□□□ -2.1
DDX6-204ENST00000531971 KRTAP20-2Q3LI61 65 aa1.94□□□□□ -2.1
DDX6-204ENST00000531971 LCE1BQ5T7P3 118 aa1.93□□□□□ -2.1
DDX6-204ENST00000531971 KRTAP5-7Q6L8G8 165 aa1.89□□□□□ -2.11
DDX6-204ENST00000531971 KRTAP5-10Q6L8G5 202 aa1.85□□□□□ -2.11
DDX6-204ENST00000531971 AHNAK2Q8IVF2 5795 aa1.85□□□□□ -2.11
DDX6-204ENST00000531971 KRTAP5-8O75690 187 aa1.83□□□□□ -2.12
DDX6-204ENST00000531971 MUC5BQ9HC84 5762 aaPredicted RBP1.81□□□□□ -2.12
DDX6-204ENST00000531971 KRTAP4-11Q9BYQ6 195 aa1.75□□□□□ -2.13
DDX6-204ENST00000531971 KRTAP4-2Q9BYR5 136 aa1.73□□□□□ -2.13
DDX6-204ENST00000531971 HMCN1Q96RW7 5635 aa1.69□□□□□ -2.14
DDX6-204ENST00000531971 LCE1CQ5T751 118 aa1.69□□□□□ -2.14
DDX6-204ENST00000531971 AHNAKQ09666 5890 aaKnown RBP1.68□□□□□ -2.14
DDX6-204ENST00000531971 KRTAP5-1Q6L8H4 278 aa1.67□□□□□ -2.14
DDX6-204ENST00000531971 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.63□□□□□ -2.15
DDX6-204ENST00000531971 MUC5ACP98088 5654 aa1.61□□□□□ -2.15
DDX6-204ENST00000531971 KRTAP5-11Q6L8G4 156 aa1.46□□□□□ -2.18
DDX6-204ENST00000531971 KRTAP4-4Q9BYR3 166 aa1.36□□□□□ -2.19
DDX6-204ENST00000531971 KRTAP21-2Q3LI59 83 aa1.3□□□□□ -2.2
DDX6-204ENST00000531971 KRTAP21-1Q3LI58 79 aa1.29□□□□□ -2.2
DDX6-204ENST00000531971 PHGR1C9JFL3 82 aa1.24□□□□□ -2.21
DDX6-204ENST00000531971 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 92.3 ms