RNA–Protein interactions for RNA: ENST00000531616.1

ARHGEF12-211, Transcript of Rho guanine nucleotide exchange factor 12, humanhuman

TSL 3

Gene ARHGEF12, Length 3,108 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF12-211ENST00000531616 RNF213Q63HN8 5207 aa2.95□□□□□ -1.94
ARHGEF12-211ENST00000531616 SPRR2GQ9BYE4 73 aa2.93□□□□□ -1.94
ARHGEF12-211ENST00000531616 MT1HP80294 61 aa2.92□□□□□ -1.94
ARHGEF12-211ENST00000531616 KRTAP19-8Q3LI54 63 aa2.86□□□□□ -1.95
ARHGEF12-211ENST00000531616 FAT4Q6V0I7 4981 aa2.84□□□□□ -1.95
ARHGEF12-211ENST00000531616 MT2AP02795 61 aa2.82□□□□□ -1.96
ARHGEF12-211ENST00000531616 MUC2Q02817 5179 aa2.82□□□□□ -1.96
ARHGEF12-211ENST00000531616 UBR4Q5T4S7 5183 aa2.8□□□□□ -1.96
ARHGEF12-211ENST00000531616 MT1FP04733 61 aa2.79□□□□□ -1.96
ARHGEF12-211ENST00000531616 TNP1P09430 55 aa2.77□□□□□ -1.97
ARHGEF12-211ENST00000531616 HMCN1Q96RW7 5635 aa2.76□□□□□ -1.97
ARHGEF12-211ENST00000531616 KRTAP19-6Q3LI70 58 aa2.75□□□□□ -1.97
ARHGEF12-211ENST00000531616 MT1BP07438 61 aa2.73□□□□□ -1.97
ARHGEF12-211ENST00000531616 M0R2T5 61 aa2.72□□□□□ -1.97
ARHGEF12-211ENST00000531616 MT1XP80297 61 aa2.68□□□□□ -1.98
ARHGEF12-211ENST00000531616 MUC19Q7Z5P9 8384 aa2.68□□□□□ -1.98
ARHGEF12-211ENST00000531616 KRTAP8-1Q8IUC2 63 aa2.66□□□□□ -1.98
ARHGEF12-211ENST00000531616 CRCT1Q9UGL9 99 aa2.64□□□□□ -1.99
ARHGEF12-211ENST00000531616 LCE3AQ5TA76 89 aa2.62□□□□□ -1.99
ARHGEF12-211ENST00000531616 KRTAP5-9P26371 169 aa2.61□□□□□ -1.99
ARHGEF12-211ENST00000531616 SSPOA2VEC9 5147 aa2.58□□□□□ -2
ARHGEF12-211ENST00000531616 USH2AO75445 5202 aa2.57□□□□□ -2
ARHGEF12-211ENST00000531616 KRTAP9-6A8MVA2 160 aa2.49□□□□□ -2.01
ARHGEF12-211ENST00000531616 SYNE1Q8NF91 8797 aaKnown RBP2.45□□□□□ -2.02
ARHGEF12-211ENST00000531616 KRTAP19-5Q3LI72 72 aa2.43□□□□□ -2.02
ARHGEF12-211ENST00000531616 KRTAP19-7Q3SYF9 63 aa2.39□□□□□ -2.03
ARHGEF12-211ENST00000531616 LCE1CQ5T751 118 aa2.35□□□□□ -2.03
ARHGEF12-211ENST00000531616 LCE1BQ5T7P3 118 aa2.35□□□□□ -2.03
ARHGEF12-211ENST00000531616 MT1EP04732 61 aa2.34□□□□□ -2.04
ARHGEF12-211ENST00000531616 MT1LQ93083 61 aa2.32□□□□□ -2.04
ARHGEF12-211ENST00000531616 OBSCNQ5VST9 7968 aa2.3□□□□□ -2.04
ARHGEF12-211ENST00000531616 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.28□□□□□ -2.04
ARHGEF12-211ENST00000531616 KRTAP2-3P0C7H8 128 aa2.27□□□□□ -2.05
ARHGEF12-211ENST00000531616 KRTAP2-4Q9BYR9 128 aa2.27□□□□□ -2.05
ARHGEF12-211ENST00000531616 KRTAP2-1Q9BYU5 128 aa2.27□□□□□ -2.05
ARHGEF12-211ENST00000531616 KRTAP5-11Q6L8G4 156 aa2.26□□□□□ -2.05
ARHGEF12-211ENST00000531616 FCGBPQ9Y6R7 5405 aaPredicted RBP2.25□□□□□ -2.05
ARHGEF12-211ENST00000531616 MT1GP13640 62 aa2.21□□□□□ -2.06
ARHGEF12-211ENST00000531616 KMT2DO14686 5537 aa2.2□□□□□ -2.06
ARHGEF12-211ENST00000531616 KRTAP19-3Q7Z4W3 81 aa2.2□□□□□ -2.06
ARHGEF12-211ENST00000531616 KRTAP20-1Q3LI63 56 aa2.19□□□□□ -2.06
ARHGEF12-211ENST00000531616 KRTAP5-4Q6L8H1 288 aa2.19□□□□□ -2.06
ARHGEF12-211ENST00000531616 MT1MQ8N339 61 aa2.18□□□□□ -2.06
ARHGEF12-211ENST00000531616 NEBP20929 6669 aa2.17□□□□□ -2.06
ARHGEF12-211ENST00000531616 PRM1P04553 51 aa2.14□□□□□ -2.07
ARHGEF12-211ENST00000531616 KRTAP5-5Q701N2 237 aaPredicted RBP2.13□□□□□ -2.07
ARHGEF12-211ENST00000531616 KRTAP4-3Q9BYR4 195 aa2.07□□□□□ -2.08
ARHGEF12-211ENST00000531616 SPRR2FQ96RM1 72 aa2.05□□□□□ -2.08
ARHGEF12-211ENST00000531616 MUC12Q9UKN1 5478 aa2.04□□□□□ -2.08
ARHGEF12-211ENST00000531616 MT1AP04731 61 aa2□□□□□ -2.09
ARHGEF12-211ENST00000531616 KRTAP5-7Q6L8G8 165 aa1.98□□□□□ -2.09
ARHGEF12-211ENST00000531616 MACF1Q9UPN3 7388 aaKnown RBP1.98□□□□□ -2.09
ARHGEF12-211ENST00000531616 KRTAP5-2Q701N4 177 aa1.97□□□□□ -2.09
ARHGEF12-211ENST00000531616 SPRR2EP22531 72 aa1.96□□□□□ -2.1
ARHGEF12-211ENST00000531616 SPRR2BP35325 72 aa1.96□□□□□ -2.1
ARHGEF12-211ENST00000531616 SPRR2AP35326 72 aa1.96□□□□□ -2.1
ARHGEF12-211ENST00000531616 SPRR2DP22532 72 aa1.95□□□□□ -2.1
ARHGEF12-211ENST00000531616 KRTAP5-1Q6L8H4 278 aa1.93□□□□□ -2.1
ARHGEF12-211ENST00000531616 FSIP2Q5CZC0 6907 aa1.93□□□□□ -2.1
ARHGEF12-211ENST00000531616 MUC5BQ9HC84 5762 aaPredicted RBP1.92□□□□□ -2.1
ARHGEF12-211ENST00000531616 KRTAP6-1Q3LI64 71 aa1.92□□□□□ -2.1
ARHGEF12-211ENST00000531616 KRTAP5-10Q6L8G5 202 aa1.9□□□□□ -2.11
ARHGEF12-211ENST00000531616 KRTAP5-8O75690 187 aa1.86□□□□□ -2.11
ARHGEF12-211ENST00000531616 SYNE2Q8WXH0 6885 aaKnown RBP1.85□□□□□ -2.11
ARHGEF12-211ENST00000531616 MDN1Q9NU22 5596 aa1.84□□□□□ -2.11
ARHGEF12-211ENST00000531616 KRTAP4-4Q9BYR3 166 aa1.84□□□□□ -2.12
ARHGEF12-211ENST00000531616 KRTAP20-2Q3LI61 65 aa1.77□□□□□ -2.13
ARHGEF12-211ENST00000531616 DSTQ03001 7570 aaKnown RBP1.73□□□□□ -2.13
ARHGEF12-211ENST00000531616 GPR98Q8WXG9 6306 aa1.73□□□□□ -2.13
ARHGEF12-211ENST00000531616 KRTAP6-2Q3LI66 62 aa1.72□□□□□ -2.13
ARHGEF12-211ENST00000531616 AHNAKQ09666 5890 aaKnown RBP1.68□□□□□ -2.14
ARHGEF12-211ENST00000531616 AHNAK2Q8IVF2 5795 aa1.67□□□□□ -2.14
ARHGEF12-211ENST00000531616 MT4P47944 62 aa1.53□□□□□ -2.16
ARHGEF12-211ENST00000531616 KRTAP21-1Q3LI58 79 aa1.45□□□□□ -2.18
ARHGEF12-211ENST00000531616 MUC5ACP98088 5654 aa1.4□□□□□ -2.18
ARHGEF12-211ENST00000531616 KRTAP21-2Q3LI59 83 aa1.3□□□□□ -2.2
ARHGEF12-211ENST00000531616 PHGR1C9JFL3 82 aa1.15□□□□□ -2.23
ARHGEF12-211ENST00000531616 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 97.5 ms