RNA–Protein interactions for RNA: ENST00000531131.1

NXF1-208, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2 BASIC

Gene NXF1, Length 1,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-208ENST00000531131 A6NED7 52 aa4.21□□□□□ -1.74
NXF1-208ENST00000531131 KRTAP19-5Q3LI72 72 aa4.2□□□□□ -1.74
NXF1-208ENST00000531131 LCE3AQ5TA76 89 aa4.18□□□□□ -1.74
NXF1-208ENST00000531131 LCE5AQ5TCM9 118 aa4.17□□□□□ -1.74
NXF1-208ENST00000531131 KRTAP19-3Q7Z4W3 81 aa4.17□□□□□ -1.74
NXF1-208ENST00000531131 KRTAP25-1Q3LHN0 102 aa4.16□□□□□ -1.74
NXF1-208ENST00000531131 LCE3BQ5TA77 95 aa4.16□□□□□ -1.74
NXF1-208ENST00000531131 DSTQ03001 7570 aaKnown RBP4.16□□□□□ -1.74
NXF1-208ENST00000531131 MT1GP13640 62 aa4.12□□□□□ -1.75
NXF1-208ENST00000531131 PP632Q6XCG6 107 aa4.1□□□□□ -1.75
NXF1-208ENST00000531131 MT1LQ93083 61 aa4.07□□□□□ -1.76
NXF1-208ENST00000531131 CDC42SE1Q9NRR8 79 aa4.06□□□□□ -1.76
NXF1-208ENST00000531131 KRTAP12-3P60328 96 aa4.05□□□□□ -1.76
NXF1-208ENST00000531131 KRTAP23-1A1A580 65 aa4.04□□□□□ -1.76
NXF1-208ENST00000531131 MT1MQ8N339 61 aa4.01□□□□□ -1.77
NXF1-208ENST00000531131 KRTAP4-9Q9BYQ8 210 aa4.01□□□□□ -1.77
NXF1-208ENST00000531131 HMCN1Q96RW7 5635 aa3.99□□□□□ -1.77
NXF1-208ENST00000531131 ROMO1P60602 79 aa3.98□□□□□ -1.77
NXF1-208ENST00000531131 AHNAK2Q8IVF2 5795 aa3.97□□□□□ -1.77
NXF1-208ENST00000531131 KRTAP19-4Q3LI73 84 aa3.93□□□□□ -1.78
NXF1-208ENST00000531131 LCE1DQ5T752 114 aa3.88□□□□□ -1.79
NXF1-208ENST00000531131 KRTAP4-3Q9BYR4 195 aa3.87□□□□□ -1.79
NXF1-208ENST00000531131 KRTAP5-10Q6L8G5 202 aa3.86□□□□□ -1.79
NXF1-208ENST00000531131 KRTAP15-1Q3LI76 137 aa3.85□□□□□ -1.79
NXF1-208ENST00000531131 KRTAP4-7Q9BYR0 210 aa3.83□□□□□ -1.8
NXF1-208ENST00000531131 LCE4AQ5TA78 99 aa3.81□□□□□ -1.8
NXF1-208ENST00000531131 BRK1Q8WUW1 75 aa3.77□□□□□ -1.81
NXF1-208ENST00000531131 LCE3CQ5T5A8 94 aa3.75□□□□□ -1.81
NXF1-208ENST00000531131 KRTAP5-4Q6L8H1 288 aa3.75□□□□□ -1.81
NXF1-208ENST00000531131 KRTAP4-12Q9BQ66 201 aa3.75□□□□□ -1.81
NXF1-208ENST00000531131 MT4P47944 62 aa3.74□□□□□ -1.81
NXF1-208ENST00000531131 KRTAP5-7Q6L8G8 165 aa3.74□□□□□ -1.81
NXF1-208ENST00000531131 A0A0A0MQY5 61 aa3.73□□□□□ -1.81
NXF1-208ENST00000531131 KRTAP9-9Q9BYP9 154 aa3.7□□□□□ -1.82
NXF1-208ENST00000531131 KRTAP9-4Q9BYQ2 154 aa3.7□□□□□ -1.82
NXF1-208ENST00000531131 KRTAP5-5Q701N2 237 aaPredicted RBP3.67□□□□□ -1.82
NXF1-208ENST00000531131 KRTAP5-3Q6L8H2 238 aa3.64□□□□□ -1.83
NXF1-208ENST00000531131 SPRR5A0A1B0GTR4 108 aa3.6□□□□□ -1.83
NXF1-208ENST00000531131 PMAIP1Q13794 54 aa3.58□□□□□ -1.84
NXF1-208ENST00000531131 KRTAP12-4P60329 112 aa3.57□□□□□ -1.84
NXF1-208ENST00000531131 KRTAP20-2Q3LI61 65 aa3.51□□□□□ -1.85
NXF1-208ENST00000531131 KRTAP9-6A8MVA2 160 aa3.49□□□□□ -1.85
NXF1-208ENST00000531131 MT1AP04731 61 aa3.48□□□□□ -1.85
NXF1-208ENST00000531131 PRO0628Q9UI54 55 aa3.44□□□□□ -1.86
NXF1-208ENST00000531131 KRTAP6-1Q3LI64 71 aa3.42□□□□□ -1.86
NXF1-208ENST00000531131 SYNE1Q8NF91 8797 aaKnown RBP3.42□□□□□ -1.86
NXF1-208ENST00000531131 KRTAP4-2Q9BYR5 136 aa3.41□□□□□ -1.86
NXF1-208ENST00000531131 AHNAKQ09666 5890 aaKnown RBP3.38□□□□□ -1.87
NXF1-208ENST00000531131 PRAC1Q96KF2 57 aa3.35□□□□□ -1.87
NXF1-208ENST00000531131 MUC5ACP98088 5654 aa3.34□□□□□ -1.87
NXF1-208ENST00000531131 MUC5BQ9HC84 5762 aaPredicted RBP3.32□□□□□ -1.88
NXF1-208ENST00000531131 KRTAP5-2Q701N4 177 aa3.31□□□□□ -1.88
NXF1-208ENST00000531131 KRTAP4-11Q9BYQ6 195 aa3.29□□□□□ -1.88
NXF1-208ENST00000531131 KTN1-AS1Q86SY8 53 aa3.25□□□□□ -1.89
NXF1-208ENST00000531131 KRTAP6-2Q3LI66 62 aa3.24□□□□□ -1.89
NXF1-208ENST00000531131 MT3P25713 68 aa3.19□□□□□ -1.9
NXF1-208ENST00000531131 KRTAP5-8O75690 187 aa3.18□□□□□ -1.9
NXF1-208ENST00000531131 OBSCNQ5VST9 7968 aa3.09□□□□□ -1.92
NXF1-208ENST00000531131 KRTAP5-1Q6L8H4 278 aa2.93□□□□□ -1.94
NXF1-208ENST00000531131 LCE1EQ5T753 118 aa2.91□□□□□ -1.94
NXF1-208ENST00000531131 LUZP6Q538Z0 58 aa2.89□□□□□ -1.95
NXF1-208ENST00000531131 LCE3DQ9BYE3 92 aa2.74□□□□□ -1.97
NXF1-208ENST00000531131 LCE1CQ5T751 118 aa2.69□□□□□ -1.98
NXF1-208ENST00000531131 LCE1BQ5T7P3 118 aa2.69□□□□□ -1.98
NXF1-208ENST00000531131 NDUFAF8A1L188 74 aa2.66□□□□□ -1.98
NXF1-208ENST00000531131 LCE3EQ5T5B0 92 aa2.61□□□□□ -1.99
NXF1-208ENST00000531131 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.47□□□□□ -2.01
NXF1-208ENST00000531131 KRTAP5-11Q6L8G4 156 aa2.42□□□□□ -2.02
NXF1-208ENST00000531131 LCE1FQ5T754 118 aa2.4□□□□□ -2.03
NXF1-208ENST00000531131 KRTAP21-2Q3LI59 83 aa2.26□□□□□ -2.05
NXF1-208ENST00000531131 PHGR1C9JFL3 82 aa2.23□□□□□ -2.05
NXF1-208ENST00000531131 INE1O15225 51 aa2.01□□□□□ -2.09
NXF1-208ENST00000531131 PRM1P04553 51 aa2.01□□□□□ -2.09
NXF1-208ENST00000531131 KRTAP4-4Q9BYR3 166 aa2□□□□□ -2.09
NXF1-208ENST00000531131 MUC19Q7Z5P9 8384 aa1.95□□□□□ -2.1
NXF1-208ENST00000531131 KRTAP21-1Q3LI58 79 aa1.67□□□□□ -2.14
NXF1-208ENST00000531131 MUC16Q8WXI7 14507 aa1.35□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 168 ms