RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 LOC100996750A0A140TA64 210 aa2.7□□□□□ -1.98
CSDE1-214ENST00000530886 KRTAP4-6Q9BYQ5 205 aa2.7□□□□□ -1.98
CSDE1-214ENST00000530886 KRTAP12-4P60329 112 aa2.68□□□□□ -1.98
CSDE1-214ENST00000530886 KRTAP4-8A0A0G2JLE6 195 aa2.67□□□□□ -1.98
CSDE1-214ENST00000530886 KRTAP4-8Q9BYQ9 185 aa2.67□□□□□ -1.98
CSDE1-214ENST00000530886 MT1LQ93083 61 aa2.62□□□□□ -1.99
CSDE1-214ENST00000530886 MT1EP04732 61 aa2.59□□□□□ -1.99
CSDE1-214ENST00000530886 NEBP20929 6669 aa2.57□□□□□ -2
CSDE1-214ENST00000530886 KRTAP2-2Q9BYT5 123 aa2.54□□□□□ -2
CSDE1-214ENST00000530886 KRTAP6-3Q3LI67 103 aa2.5□□□□□ -2.01
CSDE1-214ENST00000530886 MT1AP04731 61 aa2.49□□□□□ -2.01
CSDE1-214ENST00000530886 KRTAP4-3Q9BYR4 195 aa2.45□□□□□ -2.02
CSDE1-214ENST00000530886 KRTAP20-1Q3LI63 56 aa2.44□□□□□ -2.02
CSDE1-214ENST00000530886 KRTAP5-5Q701N2 237 aaPredicted RBP2.43□□□□□ -2.02
CSDE1-214ENST00000530886 PRM1P04553 51 aa2.42□□□□□ -2.02
CSDE1-214ENST00000530886 FCGBPQ9Y6R7 5405 aaPredicted RBP2.42□□□□□ -2.02
CSDE1-214ENST00000530886 MT1GP13640 62 aa2.4□□□□□ -2.03
CSDE1-214ENST00000530886 LCE1AQ5T7P2 110 aa2.39□□□□□ -2.03
CSDE1-214ENST00000530886 MUC12Q9UKN1 5478 aa2.38□□□□□ -2.03
CSDE1-214ENST00000530886 LCE3EQ5T5B0 92 aa2.38□□□□□ -2.03
CSDE1-214ENST00000530886 MT1MQ8N339 61 aa2.37□□□□□ -2.03
CSDE1-214ENST00000530886 LCE3DQ9BYE3 92 aa2.35□□□□□ -2.03
CSDE1-214ENST00000530886 GPR98Q8WXG9 6306 aa2.35□□□□□ -2.03
CSDE1-214ENST00000530886 KRTAP4-9Q9BYQ8 210 aa2.34□□□□□ -2.04
CSDE1-214ENST00000530886 LCE3BQ5TA77 95 aa2.3□□□□□ -2.04
CSDE1-214ENST00000530886 KRTAP19-3Q7Z4W3 81 aa2.3□□□□□ -2.04
CSDE1-214ENST00000530886 MUC5BQ9HC84 5762 aaPredicted RBP2.28□□□□□ -2.04
CSDE1-214ENST00000530886 MACF1Q9UPN3 7388 aaKnown RBP2.28□□□□□ -2.05
CSDE1-214ENST00000530886 FSIP2Q5CZC0 6907 aa2.27□□□□□ -2.05
CSDE1-214ENST00000530886 SYNE2Q8WXH0 6885 aaKnown RBP2.26□□□□□ -2.05
CSDE1-214ENST00000530886 LCE5AQ5TCM9 118 aa2.26□□□□□ -2.05
CSDE1-214ENST00000530886 KRTAP19-6Q3LI70 58 aa2.25□□□□□ -2.05
CSDE1-214ENST00000530886 KRTAP5-7Q6L8G8 165 aa2.24□□□□□ -2.05
CSDE1-214ENST00000530886 KRTAP6-1Q3LI64 71 aa2.23□□□□□ -2.05
CSDE1-214ENST00000530886 KRTAP6-2Q3LI66 62 aa2.23□□□□□ -2.05
CSDE1-214ENST00000530886 SPRR2FQ96RM1 72 aa2.23□□□□□ -2.05
CSDE1-214ENST00000530886 DSTQ03001 7570 aaKnown RBP2.23□□□□□ -2.05
CSDE1-214ENST00000530886 KRTAP5-9P26371 169 aa2.21□□□□□ -2.06
CSDE1-214ENST00000530886 SYNE1Q8NF91 8797 aaKnown RBP2.18□□□□□ -2.06
CSDE1-214ENST00000530886 AHNAK2Q8IVF2 5795 aa2.18□□□□□ -2.06
CSDE1-214ENST00000530886 LCE1EQ5T753 118 aa2.18□□□□□ -2.06
CSDE1-214ENST00000530886 AHNAKQ09666 5890 aaKnown RBP2.16□□□□□ -2.06
CSDE1-214ENST00000530886 KRTAP5-10Q6L8G5 202 aa2.16□□□□□ -2.06
CSDE1-214ENST00000530886 KRTAP4-12Q9BQ66 201 aa2.15□□□□□ -2.07
CSDE1-214ENST00000530886 LCE1DQ5T752 114 aa2.12□□□□□ -2.07
CSDE1-214ENST00000530886 SPRR2AP35326 72 aa2.1□□□□□ -2.07
CSDE1-214ENST00000530886 KRTAP9-9Q9BYP9 154 aa2.08□□□□□ -2.08
CSDE1-214ENST00000530886 KRTAP9-4Q9BYQ2 154 aa2.08□□□□□ -2.08
CSDE1-214ENST00000530886 MDN1Q9NU22 5596 aa2.05□□□□□ -2.08
CSDE1-214ENST00000530886 SPRR2EP22531 72 aa2.03□□□□□ -2.08
CSDE1-214ENST00000530886 SPRR2BP35325 72 aa2.01□□□□□ -2.09
CSDE1-214ENST00000530886 KRTAP4-2Q9BYR5 136 aa2.01□□□□□ -2.09
CSDE1-214ENST00000530886 LCE4AQ5TA78 99 aa1.99□□□□□ -2.09
CSDE1-214ENST00000530886 OBSCNQ5VST9 7968 aa1.99□□□□□ -2.09
CSDE1-214ENST00000530886 SPRR2DP22532 72 aa1.96□□□□□ -2.1
CSDE1-214ENST00000530886 LCE1FQ5T754 118 aa1.95□□□□□ -2.1
CSDE1-214ENST00000530886 HMCN1Q96RW7 5635 aa1.94□□□□□ -2.1
CSDE1-214ENST00000530886 KRTAP5-3Q6L8H2 238 aa1.94□□□□□ -2.1
CSDE1-214ENST00000530886 MT3P25713 68 aa1.93□□□□□ -2.1
CSDE1-214ENST00000530886 MUC5ACP98088 5654 aa1.88□□□□□ -2.11
CSDE1-214ENST00000530886 KRTAP4-11Q9BYQ6 195 aa1.87□□□□□ -2.11
CSDE1-214ENST00000530886 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.84□□□□□ -2.11
CSDE1-214ENST00000530886 MUC19Q7Z5P9 8384 aa1.75□□□□□ -2.13
CSDE1-214ENST00000530886 KRTAP5-4Q6L8H1 288 aa1.75□□□□□ -2.13
CSDE1-214ENST00000530886 KRTAP5-2Q701N4 177 aa1.72□□□□□ -2.13
CSDE1-214ENST00000530886 KRTAP5-1Q6L8H4 278 aa1.71□□□□□ -2.14
CSDE1-214ENST00000530886 KRTAP21-1Q3LI58 79 aa1.66□□□□□ -2.14
CSDE1-214ENST00000530886 KRTAP20-2Q3LI61 65 aa1.55□□□□□ -2.16
CSDE1-214ENST00000530886 KRTAP5-8O75690 187 aa1.51□□□□□ -2.17
CSDE1-214ENST00000530886 KRTAP21-2Q3LI59 83 aa1.49□□□□□ -2.17
CSDE1-214ENST00000530886 LCE1CQ5T751 118 aa1.49□□□□□ -2.17
CSDE1-214ENST00000530886 LCE1BQ5T7P3 118 aa1.49□□□□□ -2.17
CSDE1-214ENST00000530886 MT4P47944 62 aa1.4□□□□□ -2.19
CSDE1-214ENST00000530886 KRTAP5-11Q6L8G4 156 aa1.25□□□□□ -2.21
CSDE1-214ENST00000530886 KRTAP4-4Q9BYR3 166 aa1.23□□□□□ -2.21
CSDE1-214ENST00000530886 PHGR1C9JFL3 82 aa1.08□□□□□ -2.24
CSDE1-214ENST00000530886 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 10.8 ms