RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 KRTAP19-5Q3LI72 72 aa5.93□□□□□ -1.46
BRK1-201ENST00000530758 SPRR2DP22532 72 aa5.92□□□□□ -1.46
BRK1-201ENST00000530758 ROMO1P60602 79 aa5.9□□□□□ -1.46
BRK1-201ENST00000530758 KRTAP23-1A1A580 65 aa5.88□□□□□ -1.47
BRK1-201ENST00000530758 KRTAP2-2Q9BYT5 123 aa5.88□□□□□ -1.47
BRK1-201ENST00000530758 KRTAP2-1Q9BYU5 128 aa5.88□□□□□ -1.47
BRK1-201ENST00000530758 BRK1Q8WUW1 75 aa5.82□□□□□ -1.48
BRK1-201ENST00000530758 KRTAP19-3Q7Z4W3 81 aa5.81□□□□□ -1.48
BRK1-201ENST00000530758 LCE5AQ5TCM9 118 aa5.8□□□□□ -1.48
BRK1-201ENST00000530758 LCE3BQ5TA77 95 aa5.78□□□□□ -1.48
BRK1-201ENST00000530758 KRTAP12-3P60328 96 aa5.77□□□□□ -1.49
BRK1-201ENST00000530758 MT1GP13640 62 aa5.74□□□□□ -1.49
BRK1-201ENST00000530758 MT1LQ93083 61 aa5.73□□□□□ -1.49
BRK1-201ENST00000530758 KRTAP4-12Q9BQ66 201 aa5.72□□□□□ -1.49
BRK1-201ENST00000530758 PP632Q6XCG6 107 aa5.69□□□□□ -1.5
BRK1-201ENST00000530758 MT1MQ8N339 61 aa5.62□□□□□ -1.51
BRK1-201ENST00000530758 KRTAP19-4Q3LI73 84 aa5.58□□□□□ -1.52
BRK1-201ENST00000530758 KRTAP9-9Q9BYP9 154 aa5.55□□□□□ -1.52
BRK1-201ENST00000530758 KRTAP9-4Q9BYQ2 154 aa5.55□□□□□ -1.52
BRK1-201ENST00000530758 DSTQ03001 7570 aaKnown RBP5.54□□□□□ -1.52
BRK1-201ENST00000530758 KRTAP15-1Q3LI76 137 aa5.53□□□□□ -1.52
BRK1-201ENST00000530758 PMAIP1Q13794 54 aa5.52□□□□□ -1.53
BRK1-201ENST00000530758 PRO0628Q9UI54 55 aa5.47□□□□□ -1.53
BRK1-201ENST00000530758 A0A0A0MQY5 61 aa5.46□□□□□ -1.54
BRK1-201ENST00000530758 KRTAP4-7Q9BYR0 210 aa5.44□□□□□ -1.54
BRK1-201ENST00000530758 KRTAP4-3Q9BYR4 195 aa5.43□□□□□ -1.54
BRK1-201ENST00000530758 KRTAP4-9Q9BYQ8 210 aa5.41□□□□□ -1.54
BRK1-201ENST00000530758 GPR98Q8WXG9 6306 aa5.39□□□□□ -1.55
BRK1-201ENST00000530758 LCE4AQ5TA78 99 aa5.39□□□□□ -1.55
BRK1-201ENST00000530758 LCE3CQ5T5A8 94 aa5.37□□□□□ -1.55
BRK1-201ENST00000530758 LCE1DQ5T752 114 aa5.29□□□□□ -1.56
BRK1-201ENST00000530758 HMCN1Q96RW7 5635 aa5.25□□□□□ -1.57
BRK1-201ENST00000530758 KRTAP5-4Q6L8H1 288 aa5.21□□□□□ -1.58
BRK1-201ENST00000530758 MT4P47944 62 aa5.19□□□□□ -1.58
BRK1-201ENST00000530758 PRAC1Q96KF2 57 aa5.18□□□□□ -1.58
BRK1-201ENST00000530758 KRTAP5-5Q701N2 237 aaPredicted RBP5.16□□□□□ -1.58
BRK1-201ENST00000530758 KTN1-AS1Q86SY8 53 aa5.12□□□□□ -1.59
BRK1-201ENST00000530758 KRTAP4-2Q9BYR5 136 aa5.12□□□□□ -1.59
BRK1-201ENST00000530758 AHNAK2Q8IVF2 5795 aa5.08□□□□□ -1.6
BRK1-201ENST00000530758 KRTAP9-6A8MVA2 160 aa5.06□□□□□ -1.6
BRK1-201ENST00000530758 KRTAP5-10Q6L8G5 202 aa4.94□□□□□ -1.62
BRK1-201ENST00000530758 KRTAP4-11Q9BYQ6 195 aa4.92□□□□□ -1.62
BRK1-201ENST00000530758 SYNE1Q8NF91 8797 aaKnown RBP4.89□□□□□ -1.63
BRK1-201ENST00000530758 MT1AP04731 61 aa4.89□□□□□ -1.63
BRK1-201ENST00000530758 KRTAP20-2Q3LI61 65 aa4.89□□□□□ -1.63
BRK1-201ENST00000530758 SPRR5A0A1B0GTR4 108 aa4.88□□□□□ -1.63
BRK1-201ENST00000530758 KRTAP12-4P60329 112 aa4.88□□□□□ -1.63
BRK1-201ENST00000530758 KRTAP6-1Q3LI64 71 aa4.82□□□□□ -1.64
BRK1-201ENST00000530758 KRTAP5-3Q6L8H2 238 aa4.81□□□□□ -1.64
BRK1-201ENST00000530758 KRTAP5-7Q6L8G8 165 aa4.73□□□□□ -1.65
BRK1-201ENST00000530758 KRTAP5-2Q701N4 177 aa4.61□□□□□ -1.67
BRK1-201ENST00000530758 KRTAP6-2Q3LI66 62 aa4.52□□□□□ -1.69
BRK1-201ENST00000530758 MT3P25713 68 aa4.46□□□□□ -1.7
BRK1-201ENST00000530758 KRTAP5-8O75690 187 aa4.34□□□□□ -1.71
BRK1-201ENST00000530758 LUZP6Q538Z0 58 aa4.33□□□□□ -1.72
BRK1-201ENST00000530758 OBSCNQ5VST9 7968 aa4.2□□□□□ -1.74
BRK1-201ENST00000530758 AHNAKQ09666 5890 aaKnown RBP4.18□□□□□ -1.74
BRK1-201ENST00000530758 MUC5BQ9HC84 5762 aaPredicted RBP4.18□□□□□ -1.74
BRK1-201ENST00000530758 MUC5ACP98088 5654 aa4.16□□□□□ -1.74
BRK1-201ENST00000530758 KRTAP5-1Q6L8H4 278 aa4.1□□□□□ -1.75
BRK1-201ENST00000530758 LCE1EQ5T753 118 aa4.05□□□□□ -1.76
BRK1-201ENST00000530758 LCE3DQ9BYE3 92 aa3.94□□□□□ -1.78
BRK1-201ENST00000530758 NDUFAF8A1L188 74 aa3.89□□□□□ -1.79
BRK1-201ENST00000530758 LCE3EQ5T5B0 92 aa3.77□□□□□ -1.81
BRK1-201ENST00000530758 LCE1CQ5T751 118 aa3.75□□□□□ -1.81
BRK1-201ENST00000530758 LCE1BQ5T7P3 118 aa3.75□□□□□ -1.81
BRK1-201ENST00000530758 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.53□□□□□ -1.84
BRK1-201ENST00000530758 KRTAP5-11Q6L8G4 156 aa3.35□□□□□ -1.87
BRK1-201ENST00000530758 LCE1FQ5T754 118 aa3.33□□□□□ -1.88
BRK1-201ENST00000530758 KRTAP21-2Q3LI59 83 aa3.21□□□□□ -1.9
BRK1-201ENST00000530758 INE1O15225 51 aa3.2□□□□□ -1.9
BRK1-201ENST00000530758 PRM1P04553 51 aa3.01□□□□□ -1.93
BRK1-201ENST00000530758 KRTAP4-4Q9BYR3 166 aa2.92□□□□□ -1.94
BRK1-201ENST00000530758 PHGR1C9JFL3 82 aa2.88□□□□□ -1.95
BRK1-201ENST00000530758 MUC19Q7Z5P9 8384 aa2.59□□□□□ -1.99
BRK1-201ENST00000530758 KRTAP21-1Q3LI58 79 aa2.14□□□□□ -2.07
BRK1-201ENST00000530758 MUC16Q8WXI7 14507 aa1.89□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 70.8 ms