RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 ABCA13Q86UQ4 5058 aa4.79□□□□□ -1.64
PCDHA4-203ENST00000530339 EPPK1P58107 5090 aaKnown RBP4.78□□□□□ -1.64
PCDHA4-203ENST00000530339 KRTAP9-6A0A140TA67 174 aa4.76□□□□□ -1.65
PCDHA4-203ENST00000530339 MT4P47944 62 aa4.73□□□□□ -1.65
PCDHA4-203ENST00000530339 LOC100996750A0A140TA64 210 aa4.68□□□□□ -1.66
PCDHA4-203ENST00000530339 PRM1P04553 51 aa4.68□□□□□ -1.66
PCDHA4-203ENST00000530339 KRTAP2-3P0C7H8 128 aa4.66□□□□□ -1.66
PCDHA4-203ENST00000530339 KRTAP19-7Q3SYF9 63 aa4.66□□□□□ -1.66
PCDHA4-203ENST00000530339 KRTAP2-4Q9BYR9 128 aa4.66□□□□□ -1.66
PCDHA4-203ENST00000530339 KRTAP2-1Q9BYU5 128 aa4.66□□□□□ -1.66
PCDHA4-203ENST00000530339 UBR4Q5T4S7 5183 aa4.66□□□□□ -1.66
PCDHA4-203ENST00000530339 KRTAP4-3Q9BYR4 195 aa4.62□□□□□ -1.67
PCDHA4-203ENST00000530339 HMCN2Q8NDA2 5059 aa4.62□□□□□ -1.67
PCDHA4-203ENST00000530339 LCE2AQ5TA79 106 aaPredicted RBP4.6□□□□□ -1.67
PCDHA4-203ENST00000530339 KRTAP20-1Q3LI63 56 aa4.59□□□□□ -1.68
PCDHA4-203ENST00000530339 FAT4Q6V0I7 4981 aa4.57□□□□□ -1.68
PCDHA4-203ENST00000530339 RNF213Q63HN8 5207 aa4.57□□□□□ -1.68
PCDHA4-203ENST00000530339 MT1AP04731 61 aa4.57□□□□□ -1.68
PCDHA4-203ENST00000530339 LCE1BQ5T7P3 118 aa4.52□□□□□ -1.69
PCDHA4-203ENST00000530339 LCE1DQ5T752 114 aa4.51□□□□□ -1.69
PCDHA4-203ENST00000530339 KRTAP9-7A8MTY7 169 aa4.48□□□□□ -1.69
PCDHA4-203ENST00000530339 LCE1AQ5T7P2 110 aa4.46□□□□□ -1.7
PCDHA4-203ENST00000530339 KRTAP6-3Q3LI67 103 aa4.45□□□□□ -1.7
PCDHA4-203ENST00000530339 KRTAP9-6A8MVA2 160 aa4.44□□□□□ -1.7
PCDHA4-203ENST00000530339 KRTAP4-9Q9BYQ8 210 aa4.4□□□□□ -1.7
PCDHA4-203ENST00000530339 FSIP2Q5CZC0 6907 aa4.36□□□□□ -1.71
PCDHA4-203ENST00000530339 MUC2Q02817 5179 aa4.31□□□□□ -1.72
PCDHA4-203ENST00000530339 LCE5AQ5TCM9 118 aa4.31□□□□□ -1.72
PCDHA4-203ENST00000530339 OBSCNQ5VST9 7968 aa4.31□□□□□ -1.72
PCDHA4-203ENST00000530339 LCE4AQ5TA78 99 aa4.3□□□□□ -1.72
PCDHA4-203ENST00000530339 KRTAP2-2Q9BYT5 123 aa4.25□□□□□ -1.73
PCDHA4-203ENST00000530339 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.23□□□□□ -1.73
PCDHA4-203ENST00000530339 SYNE2Q8WXH0 6885 aaKnown RBP4.22□□□□□ -1.73
PCDHA4-203ENST00000530339 KRTAP6-1Q3LI64 71 aa4.2□□□□□ -1.74
PCDHA4-203ENST00000530339 KRTAP9-4Q9BYQ2 154 aa4.18□□□□□ -1.74
PCDHA4-203ENST00000530339 KRTAP6-2Q3LI66 62 aa4.16□□□□□ -1.74
PCDHA4-203ENST00000530339 FCGBPQ9Y6R7 5405 aaPredicted RBP4.05□□□□□ -1.76
PCDHA4-203ENST00000530339 USH2AO75445 5202 aa3.99□□□□□ -1.77
PCDHA4-203ENST00000530339 LCE1CQ5T751 118 aa3.95□□□□□ -1.78
PCDHA4-203ENST00000530339 LCE1EQ5T753 118 aa3.95□□□□□ -1.78
PCDHA4-203ENST00000530339 LCE1FQ5T754 118 aa3.95□□□□□ -1.78
PCDHA4-203ENST00000530339 DSTQ03001 7570 aaKnown RBP3.85□□□□□ -1.79
PCDHA4-203ENST00000530339 KMT2DO14686 5537 aa3.81□□□□□ -1.8
PCDHA4-203ENST00000530339 KRTAP9-9Q9BYP9 154 aa3.81□□□□□ -1.8
PCDHA4-203ENST00000530339 KRTAP5-9P26371 169 aa3.68□□□□□ -1.82
PCDHA4-203ENST00000530339 MACF1Q9UPN3 7388 aaKnown RBP3.63□□□□□ -1.83
PCDHA4-203ENST00000530339 GPR98Q8WXG9 6306 aa3.6□□□□□ -1.83
PCDHA4-203ENST00000530339 NEBP20929 6669 aa3.59□□□□□ -1.84
PCDHA4-203ENST00000530339 SSPOA2VEC9 5147 aa3.55□□□□□ -1.84
PCDHA4-203ENST00000530339 MUC12Q9UKN1 5478 aa3.55□□□□□ -1.84
PCDHA4-203ENST00000530339 MUC19Q7Z5P9 8384 aa3.44□□□□□ -1.86
PCDHA4-203ENST00000530339 KRTAP4-11Q9BYQ6 195 aa3.43□□□□□ -1.86
PCDHA4-203ENST00000530339 KRTAP20-2Q3LI61 65 aa3.42□□□□□ -1.86
PCDHA4-203ENST00000530339 KRTAP5-5Q701N2 237 aaPredicted RBP3.36□□□□□ -1.87
PCDHA4-203ENST00000530339 KRTAP4-6Q9BYQ5 205 aa3.35□□□□□ -1.87
PCDHA4-203ENST00000530339 MDN1Q9NU22 5596 aa3.28□□□□□ -1.88
PCDHA4-203ENST00000530339 KRTAP5-4Q6L8H1 288 aa3.25□□□□□ -1.89
PCDHA4-203ENST00000530339 KRTAP4-12Q9BQ66 201 aa3.02□□□□□ -1.93
PCDHA4-203ENST00000530339 KRTAP4-2Q9BYR5 136 aa3.02□□□□□ -1.93
PCDHA4-203ENST00000530339 KRTAP4-4Q9BYR3 166 aa3□□□□□ -1.93
PCDHA4-203ENST00000530339 AHNAK2Q8IVF2 5795 aa2.88□□□□□ -1.95
PCDHA4-203ENST00000530339 KRTAP5-3Q6L8H2 238 aa2.86□□□□□ -1.95
PCDHA4-203ENST00000530339 MUC5ACP98088 5654 aa2.84□□□□□ -1.95
PCDHA4-203ENST00000530339 HMCN1Q96RW7 5635 aa2.73□□□□□ -1.97
PCDHA4-203ENST00000530339 KRTAP5-10Q6L8G5 202 aa2.64□□□□□ -1.99
PCDHA4-203ENST00000530339 KRTAP5-2Q701N4 177 aa2.62□□□□□ -1.99
PCDHA4-203ENST00000530339 KRTAP5-8O75690 187 aa2.55□□□□□ -2
PCDHA4-203ENST00000530339 PHGR1C9JFL3 82 aa2.47□□□□□ -2.01
PCDHA4-203ENST00000530339 KRTAP5-11Q6L8G4 156 aa2.36□□□□□ -2.03
PCDHA4-203ENST00000530339 MUC5BQ9HC84 5762 aaPredicted RBP2.32□□□□□ -2.04
PCDHA4-203ENST00000530339 AHNAKQ09666 5890 aaKnown RBP2.27□□□□□ -2.05
PCDHA4-203ENST00000530339 KRTAP5-1Q6L8H4 278 aa2.26□□□□□ -2.05
PCDHA4-203ENST00000530339 KRTAP21-2Q3LI59 83 aa2.21□□□□□ -2.06
PCDHA4-203ENST00000530339 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.19□□□□□ -2.06
PCDHA4-203ENST00000530339 KRTAP21-1Q3LI58 79 aa2.16□□□□□ -2.06
PCDHA4-203ENST00000530339 KRTAP5-7Q6L8G8 165 aa1.96□□□□□ -2.1
PCDHA4-203ENST00000530339 MUC16Q8WXI7 14507 aa1.37□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 98.7 ms