RNA–Protein interactions for RNA: ENST00000530322.5

SF3B2-209, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-209ENST00000530322 MT1GP13640 62 aa6.06□□□□□ -1.44
SF3B2-209ENST00000530322 MT1LQ93083 61 aa6.02□□□□□ -1.45
SF3B2-209ENST00000530322 DSTQ03001 7570 aaKnown RBP6□□□□□ -1.45
SF3B2-209ENST00000530322 K7ERS5 55 aa5.98□□□□□ -1.45
SF3B2-209ENST00000530322 PP632Q6XCG6 107 aa5.98□□□□□ -1.45
SF3B2-209ENST00000530322 MT1MQ8N339 61 aa5.96□□□□□ -1.46
SF3B2-209ENST00000530322 KRTAP25-1Q3LHN0 102 aa5.93□□□□□ -1.46
SF3B2-209ENST00000530322 RPS28P62857 69 aaKnown RBP5.92□□□□□ -1.46
SF3B2-209ENST00000530322 KRTAP12-3P60328 96 aa5.9□□□□□ -1.46
SF3B2-209ENST00000530322 A6NED7 52 aa5.89□□□□□ -1.47
SF3B2-209ENST00000530322 KRTAP4-3Q9BYR4 195 aa5.81□□□□□ -1.48
SF3B2-209ENST00000530322 KRTAP4-9Q9BYQ8 210 aa5.73□□□□□ -1.49
SF3B2-209ENST00000530322 KRTAP4-7Q9BYR0 210 aa5.73□□□□□ -1.49
SF3B2-209ENST00000530322 KRTAP23-1A1A580 65 aa5.72□□□□□ -1.49
SF3B2-209ENST00000530322 CDC42SE1Q9NRR8 79 aa5.7□□□□□ -1.5
SF3B2-209ENST00000530322 LCE4AQ5TA78 99 aa5.67□□□□□ -1.5
SF3B2-209ENST00000530322 LCE1DQ5T752 114 aa5.63□□□□□ -1.51
SF3B2-209ENST00000530322 ROMO1P60602 79 aa5.62□□□□□ -1.51
SF3B2-209ENST00000530322 KRTAP5-4Q6L8H1 288 aa5.61□□□□□ -1.51
SF3B2-209ENST00000530322 KRTAP19-4Q3LI73 84 aa5.58□□□□□ -1.52
SF3B2-209ENST00000530322 MT4P47944 62 aa5.57□□□□□ -1.52
SF3B2-209ENST00000530322 KRTAP15-1Q3LI76 137 aa5.56□□□□□ -1.52
SF3B2-209ENST00000530322 PRO0628Q9UI54 55 aa5.54□□□□□ -1.52
SF3B2-209ENST00000530322 HMCN1Q96RW7 5635 aa5.52□□□□□ -1.53
SF3B2-209ENST00000530322 KRTAP5-5Q701N2 237 aaPredicted RBP5.46□□□□□ -1.54
SF3B2-209ENST00000530322 LCE3CQ5T5A8 94 aa5.45□□□□□ -1.54
SF3B2-209ENST00000530322 KRTAP4-6Q9BYQ5 205 aa5.45□□□□□ -1.54
SF3B2-209ENST00000530322 LOC100996750A0A140TA64 210 aa5.42□□□□□ -1.54
SF3B2-209ENST00000530322 GPR98Q8WXG9 6306 aa5.37□□□□□ -1.55
SF3B2-209ENST00000530322 KRTAP20-2Q3LI61 65 aa5.27□□□□□ -1.57
SF3B2-209ENST00000530322 AHNAK2Q8IVF2 5795 aa5.27□□□□□ -1.57
SF3B2-209ENST00000530322 SPRR5A0A1B0GTR4 108 aa5.26□□□□□ -1.57
SF3B2-209ENST00000530322 PMAIP1Q13794 54 aa5.26□□□□□ -1.57
SF3B2-209ENST00000530322 KRTAP12-4P60329 112 aa5.25□□□□□ -1.57
SF3B2-209ENST00000530322 H3BS24 57 aa5.24□□□□□ -1.57
SF3B2-209ENST00000530322 BRK1Q8WUW1 75 aa5.2□□□□□ -1.58
SF3B2-209ENST00000530322 KRTAP9-6A8MVA2 160 aa5.16□□□□□ -1.58
SF3B2-209ENST00000530322 KRTAP5-10Q6L8G5 202 aa5.16□□□□□ -1.58
SF3B2-209ENST00000530322 SYNE1Q8NF91 8797 aaKnown RBP5.15□□□□□ -1.58
SF3B2-209ENST00000530322 MT1AP04731 61 aa5.12□□□□□ -1.59
SF3B2-209ENST00000530322 KRTAP5-3Q6L8H2 238 aa5.12□□□□□ -1.59
SF3B2-209ENST00000530322 KRTAP6-1Q3LI64 71 aa5.09□□□□□ -1.59
SF3B2-209ENST00000530322 A0A0A0MQY5 61 aa5.03□□□□□ -1.6
SF3B2-209ENST00000530322 KTN1-AS1Q86SY8 53 aa4.98□□□□□ -1.61
SF3B2-209ENST00000530322 KRTAP5-7Q6L8G8 165 aa4.94□□□□□ -1.62
SF3B2-209ENST00000530322 KRTAP5-2Q701N4 177 aa4.94□□□□□ -1.62
SF3B2-209ENST00000530322 KRTAP9-4Q9BYQ2 154 aa4.93□□□□□ -1.62
SF3B2-209ENST00000530322 KRTAP6-2Q3LI66 62 aa4.82□□□□□ -1.64
SF3B2-209ENST00000530322 KRTAP4-11Q9BYQ6 195 aa4.77□□□□□ -1.65
SF3B2-209ENST00000530322 PRAC1Q96KF2 57 aa4.7□□□□□ -1.66
SF3B2-209ENST00000530322 MT3P25713 68 aa4.67□□□□□ -1.66
SF3B2-209ENST00000530322 KRTAP5-8O75690 187 aa4.62□□□□□ -1.67
SF3B2-209ENST00000530322 OBSCNQ5VST9 7968 aa4.58□□□□□ -1.68
SF3B2-209ENST00000530322 KRTAP5-1Q6L8H4 278 aa4.4□□□□□ -1.71
SF3B2-209ENST00000530322 KRTAP9-9Q9BYP9 154 aa4.33□□□□□ -1.72
SF3B2-209ENST00000530322 MUC5BQ9HC84 5762 aaPredicted RBP4.28□□□□□ -1.72
SF3B2-209ENST00000530322 MUC5ACP98088 5654 aa4.28□□□□□ -1.72
SF3B2-209ENST00000530322 LCE1EQ5T753 118 aa4.26□□□□□ -1.73
SF3B2-209ENST00000530322 AHNAKQ09666 5890 aaKnown RBP4.24□□□□□ -1.73
SF3B2-209ENST00000530322 LUZP6Q538Z0 58 aa4.2□□□□□ -1.74
SF3B2-209ENST00000530322 KRTAP4-2Q9BYR5 136 aa4.02□□□□□ -1.77
SF3B2-209ENST00000530322 NDUFAF8A1L188 74 aa4.01□□□□□ -1.77
SF3B2-209ENST00000530322 LCE1BQ5T7P3 118 aa3.98□□□□□ -1.77
SF3B2-209ENST00000530322 LCE1CQ5T751 118 aa3.96□□□□□ -1.78
SF3B2-209ENST00000530322 LCE3DQ9BYE3 92 aa3.95□□□□□ -1.78
SF3B2-209ENST00000530322 LCE3EQ5T5B0 92 aa3.74□□□□□ -1.81
SF3B2-209ENST00000530322 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.63□□□□□ -1.83
SF3B2-209ENST00000530322 KRTAP5-11Q6L8G4 156 aa3.58□□□□□ -1.84
SF3B2-209ENST00000530322 KRTAP4-12Q9BQ66 201 aa3.57□□□□□ -1.84
SF3B2-209ENST00000530322 INE1O15225 51 aa3.46□□□□□ -1.86
SF3B2-209ENST00000530322 LCE1FQ5T754 118 aa3.43□□□□□ -1.86
SF3B2-209ENST00000530322 KRTAP21-2Q3LI59 83 aa3.35□□□□□ -1.87
SF3B2-209ENST00000530322 PHGR1C9JFL3 82 aa3.09□□□□□ -1.91
SF3B2-209ENST00000530322 KRTAP4-4Q9BYR3 166 aa3.03□□□□□ -1.92
SF3B2-209ENST00000530322 PRM1P04553 51 aa2.88□□□□□ -1.95
SF3B2-209ENST00000530322 MUC19Q7Z5P9 8384 aa2.78□□□□□ -1.96
SF3B2-209ENST00000530322 KRTAP21-1Q3LI58 79 aa2.26□□□□□ -2.05
SF3B2-209ENST00000530322 MUC16Q8WXI7 14507 aa2.02□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 140.4 ms