RNA–Protein interactions for RNA: ENST00000529445.1

SORL1-208, Transcript of sortilin related receptor 1, humanhuman

TSL 2

Gene SORL1, Length 616 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-208ENST00000529445 KRTAP19-3Q7Z4W3 81 aa4.5□□□□□ -1.69
SORL1-208ENST00000529445 SPATA8Q6RVD6 105 aa4.48□□□□□ -1.69
SORL1-208ENST00000529445 A0A1B0GU33 70 aa4.47□□□□□ -1.69
SORL1-208ENST00000529445 SPINT4Q6UDR6 99 aa4.47□□□□□ -1.69
SORL1-208ENST00000529445 KRTAP12-1P59990 96 aa4.43□□□□□ -1.7
SORL1-208ENST00000529445 KRTAP19-5Q3LI72 72 aa4.4□□□□□ -1.71
SORL1-208ENST00000529445 MT1GP13640 62 aa4.38□□□□□ -1.71
SORL1-208ENST00000529445 SMIM26A0A096LP01 95 aa4.37□□□□□ -1.71
SORL1-208ENST00000529445 PP632Q6XCG6 107 aa4.37□□□□□ -1.71
SORL1-208ENST00000529445 A0A1B0GU69 56 aa4.36□□□□□ -1.71
SORL1-208ENST00000529445 HMCN1Q96RW7 5635 aa4.34□□□□□ -1.72
SORL1-208ENST00000529445 RPS28P62857 69 aaKnown RBP4.31□□□□□ -1.72
SORL1-208ENST00000529445 MT1MQ8N339 61 aa4.31□□□□□ -1.72
SORL1-208ENST00000529445 A8MU10 97 aa4.3□□□□□ -1.72
SORL1-208ENST00000529445 MT1LQ93083 61 aa4.29□□□□□ -1.72
SORL1-208ENST00000529445 LINC01558Q9Y6Z2 57 aa4.29□□□□□ -1.72
SORL1-208ENST00000529445 TNP1P09430 55 aa4.28□□□□□ -1.72
SORL1-208ENST00000529445 LCE3AQ5TA76 89 aa4.26□□□□□ -1.73
SORL1-208ENST00000529445 C10orf95Q9H7T3 257 aa4.26□□□□□ -1.73
SORL1-208ENST00000529445 AHNAK2Q8IVF2 5795 aa4.25□□□□□ -1.73
SORL1-208ENST00000529445 MT3P25713 68 aa4.23□□□□□ -1.73
SORL1-208ENST00000529445 MT4P47944 62 aa4.22□□□□□ -1.73
SORL1-208ENST00000529445 Q1T7F1 81 aa4.22□□□□□ -1.73
SORL1-208ENST00000529445 PRR15LQ9BU68 103 aa4.22□□□□□ -1.73
SORL1-208ENST00000529445 V9GYY9 64 aa4.22□□□□□ -1.73
SORL1-208ENST00000529445 NDUFAF8A1L188 74 aa4.21□□□□□ -1.74
SORL1-208ENST00000529445 KRTAP4-3Q9BYR4 195 aa4.19□□□□□ -1.74
SORL1-208ENST00000529445 KRTAP5-4Q6L8H1 288 aa4.16□□□□□ -1.74
SORL1-208ENST00000529445 KRTAP12-3P60328 96 aa4.11□□□□□ -1.75
SORL1-208ENST00000529445 PSPHP1O15172 72 aa4.1□□□□□ -1.75
SORL1-208ENST00000529445 UQCR11O14957 56 aa4.09□□□□□ -1.75
SORL1-208ENST00000529445 KRTAP5-3Q6L8H2 238 aa4.05□□□□□ -1.76
SORL1-208ENST00000529445 KRTAP5-10Q6L8G5 202 aa4.03□□□□□ -1.76
SORL1-208ENST00000529445 MIR22HGQ0VDD5 57 aa4.02□□□□□ -1.77
SORL1-208ENST00000529445 A6NED7 52 aa3.98□□□□□ -1.77
SORL1-208ENST00000529445 KRTAP25-1Q3LHN0 102 aa3.98□□□□□ -1.77
SORL1-208ENST00000529445 KRTAP5-5Q701N2 237 aaPredicted RBP3.96□□□□□ -1.78
SORL1-208ENST00000529445 KRTAP20-2Q3LI61 65 aa3.94□□□□□ -1.78
SORL1-208ENST00000529445 K7ERS5 55 aa3.93□□□□□ -1.78
SORL1-208ENST00000529445 SPRR5A0A1B0GTR4 108 aa3.92□□□□□ -1.78
SORL1-208ENST00000529445 CDC42SE1Q9NRR8 79 aa3.92□□□□□ -1.78
SORL1-208ENST00000529445 LCE1FQ5T754 118 aa3.91□□□□□ -1.78
SORL1-208ENST00000529445 KRTAP12-4P60329 112 aa3.9□□□□□ -1.79
SORL1-208ENST00000529445 KRTAP5-7Q6L8G8 165 aa3.89□□□□□ -1.79
SORL1-208ENST00000529445 SYNE1Q8NF91 8797 aaKnown RBP3.83□□□□□ -1.8
SORL1-208ENST00000529445 PRO0628Q9UI54 55 aa3.83□□□□□ -1.8
SORL1-208ENST00000529445 LCE3CQ5T5A8 94 aa3.77□□□□□ -1.81
SORL1-208ENST00000529445 BRK1Q8WUW1 75 aa3.76□□□□□ -1.81
SORL1-208ENST00000529445 ROMO1P60602 79 aa3.68□□□□□ -1.82
SORL1-208ENST00000529445 MT1AP04731 61 aa3.66□□□□□ -1.82
SORL1-208ENST00000529445 KRTAP5-2Q701N4 177 aa3.64□□□□□ -1.83
SORL1-208ENST00000529445 KRTAP6-1Q3LI64 71 aa3.63□□□□□ -1.83
SORL1-208ENST00000529445 PMAIP1Q13794 54 aa3.57□□□□□ -1.84
SORL1-208ENST00000529445 AHNAKQ09666 5890 aaKnown RBP3.55□□□□□ -1.84
SORL1-208ENST00000529445 KRTAP9-6A8MVA2 160 aa3.53□□□□□ -1.84
SORL1-208ENST00000529445 KTN1-AS1Q86SY8 53 aa3.53□□□□□ -1.84
SORL1-208ENST00000529445 LCE1EQ5T753 118 aa3.51□□□□□ -1.85
SORL1-208ENST00000529445 MUC5BQ9HC84 5762 aaPredicted RBP3.5□□□□□ -1.85
SORL1-208ENST00000529445 MUC5ACP98088 5654 aa3.5□□□□□ -1.85
SORL1-208ENST00000529445 KRTAP5-8O75690 187 aa3.49□□□□□ -1.85
SORL1-208ENST00000529445 KRTAP6-2Q3LI66 62 aa3.49□□□□□ -1.85
SORL1-208ENST00000529445 OBSCNQ5VST9 7968 aa3.49□□□□□ -1.85
SORL1-208ENST00000529445 LCE3EQ5T5B0 92 aa3.32□□□□□ -1.88
SORL1-208ENST00000529445 KRTAP5-11Q6L8G4 156 aa3.32□□□□□ -1.88
SORL1-208ENST00000529445 KRTAP5-1Q6L8H4 278 aa3.27□□□□□ -1.89
SORL1-208ENST00000529445 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.04□□□□□ -1.92
SORL1-208ENST00000529445 LCE1BQ5T7P3 118 aa2.92□□□□□ -1.94
SORL1-208ENST00000529445 LUZP6Q538Z0 58 aa2.89□□□□□ -1.95
SORL1-208ENST00000529445 LCE1CQ5T751 118 aa2.88□□□□□ -1.95
SORL1-208ENST00000529445 LCE3DQ9BYE3 92 aa2.82□□□□□ -1.96
SORL1-208ENST00000529445 KRTAP4-4Q9BYR3 166 aa2.54□□□□□ -2
SORL1-208ENST00000529445 KRTAP21-2Q3LI59 83 aa2.39□□□□□ -2.03
SORL1-208ENST00000529445 PHGR1C9JFL3 82 aa2.36□□□□□ -2.03
SORL1-208ENST00000529445 INE1O15225 51 aa2.35□□□□□ -2.03
SORL1-208ENST00000529445 MUC19Q7Z5P9 8384 aa2.15□□□□□ -2.07
SORL1-208ENST00000529445 PRM1P04553 51 aa1.89□□□□□ -2.11
SORL1-208ENST00000529445 KRTAP21-1Q3LI58 79 aa1.8□□□□□ -2.12
SORL1-208ENST00000529445 MUC16Q8WXI7 14507 aa1.55□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 81.2 ms