RNA–Protein interactions for RNA: ENST00000529332.5

TM9SF1-208, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5

Gene TM9SF1, Length 2,107 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-208ENST00000529332 KRTAP9-6A8MVA2 160 aa5.59□□□□□ -1.52
TM9SF1-208ENST00000529332 MACF1Q9UPN3 7388 aaKnown RBP5.55□□□□□ -1.52
TM9SF1-208ENST00000529332 KRTAP6-3Q3LI67 103 aa5.53□□□□□ -1.52
TM9SF1-208ENST00000529332 KRTAP4-7Q9BYR0 210 aa5.52□□□□□ -1.53
TM9SF1-208ENST00000529332 MT1EP04732 61 aa5.51□□□□□ -1.53
TM9SF1-208ENST00000529332 MT1LQ93083 61 aa5.45□□□□□ -1.54
TM9SF1-208ENST00000529332 SPRR2FQ96RM1 72 aa5.45□□□□□ -1.54
TM9SF1-208ENST00000529332 KRTAP19-4Q3LI73 84 aa5.41□□□□□ -1.54
TM9SF1-208ENST00000529332 SYNE2Q8WXH0 6885 aaKnown RBP5.41□□□□□ -1.54
TM9SF1-208ENST00000529332 KRTAP5-9P26371 169 aa5.38□□□□□ -1.55
TM9SF1-208ENST00000529332 KRTAP2-3P0C7H8 128 aa5.36□□□□□ -1.55
TM9SF1-208ENST00000529332 KRTAP2-4Q9BYR9 128 aa5.36□□□□□ -1.55
TM9SF1-208ENST00000529332 KRTAP2-1Q9BYU5 128 aa5.36□□□□□ -1.55
TM9SF1-208ENST00000529332 KRTAP19-3Q7Z4W3 81 aa5.32□□□□□ -1.56
TM9SF1-208ENST00000529332 MT1GP13640 62 aa5.28□□□□□ -1.56
TM9SF1-208ENST00000529332 MUC12Q9UKN1 5478 aa5.25□□□□□ -1.57
TM9SF1-208ENST00000529332 LCE5AQ5TCM9 118 aa5.21□□□□□ -1.57
TM9SF1-208ENST00000529332 MT1MQ8N339 61 aa5.2□□□□□ -1.58
TM9SF1-208ENST00000529332 LCE1AQ5T7P2 110 aa5.19□□□□□ -1.58
TM9SF1-208ENST00000529332 SPRR2EP22531 72 aa5.18□□□□□ -1.58
TM9SF1-208ENST00000529332 SPRR2BP35325 72 aa5.18□□□□□ -1.58
TM9SF1-208ENST00000529332 SPRR2AP35326 72 aa5.18□□□□□ -1.58
TM9SF1-208ENST00000529332 KRTAP4-3Q9BYR4 195 aa5.17□□□□□ -1.58
TM9SF1-208ENST00000529332 LOC100996750A0A140TA64 210 aa5.15□□□□□ -1.59
TM9SF1-208ENST00000529332 NEBP20929 6669 aa5.14□□□□□ -1.59
TM9SF1-208ENST00000529332 KRTAP20-1Q3LI63 56 aa5.08□□□□□ -1.6
TM9SF1-208ENST00000529332 MDN1Q9NU22 5596 aa5.08□□□□□ -1.6
TM9SF1-208ENST00000529332 SPRR2DP22532 72 aa5□□□□□ -1.61
TM9SF1-208ENST00000529332 DSTQ03001 7570 aaKnown RBP4.87□□□□□ -1.63
TM9SF1-208ENST00000529332 KRTAP2-2Q9BYT5 123 aa4.83□□□□□ -1.64
TM9SF1-208ENST00000529332 LCE3BQ5TA77 95 aa4.79□□□□□ -1.64
TM9SF1-208ENST00000529332 KRTAP12-4P60329 112 aa4.72□□□□□ -1.65
TM9SF1-208ENST00000529332 KRTAP5-5Q701N2 237 aaPredicted RBP4.67□□□□□ -1.66
TM9SF1-208ENST00000529332 KRTAP6-1Q3LI64 71 aa4.63□□□□□ -1.67
TM9SF1-208ENST00000529332 KRTAP4-9Q9BYQ8 210 aa4.62□□□□□ -1.67
TM9SF1-208ENST00000529332 MT1AP04731 61 aa4.6□□□□□ -1.67
TM9SF1-208ENST00000529332 SYNE1Q8NF91 8797 aaKnown RBP4.52□□□□□ -1.69
TM9SF1-208ENST00000529332 KRTAP5-4Q6L8H1 288 aa4.48□□□□□ -1.69
TM9SF1-208ENST00000529332 LCE4AQ5TA78 99 aa4.45□□□□□ -1.7
TM9SF1-208ENST00000529332 LCE3DQ9BYE3 92 aa4.42□□□□□ -1.7
TM9SF1-208ENST00000529332 KRTAP9-4Q9BYQ2 154 aa4.37□□□□□ -1.71
TM9SF1-208ENST00000529332 LCE3EQ5T5B0 92 aa4.36□□□□□ -1.71
TM9SF1-208ENST00000529332 MT4P47944 62 aa4.31□□□□□ -1.72
TM9SF1-208ENST00000529332 LCE1DQ5T752 114 aa4.27□□□□□ -1.73
TM9SF1-208ENST00000529332 KRTAP4-6Q9BYQ5 205 aa4.25□□□□□ -1.73
TM9SF1-208ENST00000529332 KRTAP20-2Q3LI61 65 aa4.2□□□□□ -1.74
TM9SF1-208ENST00000529332 KRTAP6-2Q3LI66 62 aa4.19□□□□□ -1.74
TM9SF1-208ENST00000529332 MT3P25713 68 aa4.19□□□□□ -1.74
TM9SF1-208ENST00000529332 PRM1P04553 51 aa4.18□□□□□ -1.74
TM9SF1-208ENST00000529332 HMCN1Q96RW7 5635 aa4.13□□□□□ -1.75
TM9SF1-208ENST00000529332 KRTAP5-2Q701N4 177 aa4.07□□□□□ -1.76
TM9SF1-208ENST00000529332 GPR98Q8WXG9 6306 aa4.06□□□□□ -1.76
TM9SF1-208ENST00000529332 KRTAP5-3Q6L8H2 238 aa4.03□□□□□ -1.76
TM9SF1-208ENST00000529332 OBSCNQ5VST9 7968 aa4.01□□□□□ -1.77
TM9SF1-208ENST00000529332 KRTAP5-10Q6L8G5 202 aa3.92□□□□□ -1.78
TM9SF1-208ENST00000529332 AHNAK2Q8IVF2 5795 aa3.91□□□□□ -1.78
TM9SF1-208ENST00000529332 KRTAP5-7Q6L8G8 165 aa3.8□□□□□ -1.8
TM9SF1-208ENST00000529332 KRTAP4-11Q9BYQ6 195 aa3.65□□□□□ -1.83
TM9SF1-208ENST00000529332 LCE1EQ5T753 118 aa3.64□□□□□ -1.83
TM9SF1-208ENST00000529332 MUC5ACP98088 5654 aa3.52□□□□□ -1.85
TM9SF1-208ENST00000529332 KRTAP5-1Q6L8H4 278 aa3.5□□□□□ -1.85
TM9SF1-208ENST00000529332 KRTAP5-8O75690 187 aa3.5□□□□□ -1.85
TM9SF1-208ENST00000529332 LCE1BQ5T7P3 118 aa3.41□□□□□ -1.86
TM9SF1-208ENST00000529332 LCE1CQ5T751 118 aa3.38□□□□□ -1.87
TM9SF1-208ENST00000529332 KRTAP9-9Q9BYP9 154 aa3.37□□□□□ -1.87
TM9SF1-208ENST00000529332 KRTAP4-2Q9BYR5 136 aa3.37□□□□□ -1.87
TM9SF1-208ENST00000529332 AHNAKQ09666 5890 aaKnown RBP3.17□□□□□ -1.9
TM9SF1-208ENST00000529332 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.16□□□□□ -1.9
TM9SF1-208ENST00000529332 MUC5BQ9HC84 5762 aaPredicted RBP3.16□□□□□ -1.9
TM9SF1-208ENST00000529332 KRTAP21-2Q3LI59 83 aa2.99□□□□□ -1.93
TM9SF1-208ENST00000529332 KRTAP5-11Q6L8G4 156 aa2.99□□□□□ -1.93
TM9SF1-208ENST00000529332 KRTAP4-12Q9BQ66 201 aa2.8□□□□□ -1.96
TM9SF1-208ENST00000529332 KRTAP4-4Q9BYR3 166 aa2.74□□□□□ -1.97
TM9SF1-208ENST00000529332 LCE1FQ5T754 118 aa2.72□□□□□ -1.97
TM9SF1-208ENST00000529332 KRTAP21-1Q3LI58 79 aa2.63□□□□□ -1.99
TM9SF1-208ENST00000529332 PHGR1C9JFL3 82 aa2.56□□□□□ -2
TM9SF1-208ENST00000529332 MUC19Q7Z5P9 8384 aa2.55□□□□□ -2
TM9SF1-208ENST00000529332 MUC16Q8WXI7 14507 aa1.65□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 97 ms