RNA–Protein interactions for RNA: ENST00000529310.5

PCDHA6-203, Transcript of protocadherin alpha 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA6, Length 5,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-203ENST00000529310 MT1EP04732 61 aa4.96□□□□□ -1.62
PCDHA6-203ENST00000529310 RNF213Q63HN8 5207 aa4.89□□□□□ -1.63
PCDHA6-203ENST00000529310 PRM1P04553 51 aa4.87□□□□□ -1.63
PCDHA6-203ENST00000529310 MT3P25713 68 aa4.85□□□□□ -1.63
PCDHA6-203ENST00000529310 FAT4Q6V0I7 4981 aa4.85□□□□□ -1.63
PCDHA6-203ENST00000529310 MT1MQ8N339 61 aa4.82□□□□□ -1.64
PCDHA6-203ENST00000529310 HMCN2Q8NDA2 5059 aa4.8□□□□□ -1.64
PCDHA6-203ENST00000529310 UBR4Q5T4S7 5183 aa4.79□□□□□ -1.64
PCDHA6-203ENST00000529310 FSIP2Q5CZC0 6907 aa4.78□□□□□ -1.64
PCDHA6-203ENST00000529310 LOC100996750A0A140TA64 210 aa4.76□□□□□ -1.65
PCDHA6-203ENST00000529310 MT4P47944 62 aa4.75□□□□□ -1.65
PCDHA6-203ENST00000529310 SYNE1Q8NF91 8797 aaKnown RBP4.73□□□□□ -1.65
PCDHA6-203ENST00000529310 KRTAP4-3Q9BYR4 195 aa4.68□□□□□ -1.66
PCDHA6-203ENST00000529310 LCE1BQ5T7P3 118 aa4.66□□□□□ -1.66
PCDHA6-203ENST00000529310 KRTAP9-7A8MTY7 169 aa4.65□□□□□ -1.66
PCDHA6-203ENST00000529310 MUC2Q02817 5179 aa4.63□□□□□ -1.67
PCDHA6-203ENST00000529310 KRTAP20-1Q3LI63 56 aa4.63□□□□□ -1.67
PCDHA6-203ENST00000529310 LCE1DQ5T752 114 aa4.62□□□□□ -1.67
PCDHA6-203ENST00000529310 KRTAP6-3Q3LI67 103 aa4.61□□□□□ -1.67
PCDHA6-203ENST00000529310 KRTAP19-7Q3SYF9 63 aa4.56□□□□□ -1.68
PCDHA6-203ENST00000529310 MT1AP04731 61 aa4.53□□□□□ -1.68
PCDHA6-203ENST00000529310 LCE1AQ5T7P2 110 aa4.53□□□□□ -1.68
PCDHA6-203ENST00000529310 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.5□□□□□ -1.69
PCDHA6-203ENST00000529310 KRTAP2-3P0C7H8 128 aa4.5□□□□□ -1.69
PCDHA6-203ENST00000529310 KRTAP2-4Q9BYR9 128 aa4.5□□□□□ -1.69
PCDHA6-203ENST00000529310 KRTAP2-1Q9BYU5 128 aa4.5□□□□□ -1.69
PCDHA6-203ENST00000529310 KRTAP4-9Q9BYQ8 210 aa4.48□□□□□ -1.69
PCDHA6-203ENST00000529310 SYNE2Q8WXH0 6885 aaKnown RBP4.42□□□□□ -1.7
PCDHA6-203ENST00000529310 LCE5AQ5TCM9 118 aa4.33□□□□□ -1.72
PCDHA6-203ENST00000529310 KRTAP2-2Q9BYT5 123 aa4.32□□□□□ -1.72
PCDHA6-203ENST00000529310 LCE4AQ5TA78 99 aa4.3□□□□□ -1.72
PCDHA6-203ENST00000529310 OBSCNQ5VST9 7968 aa4.27□□□□□ -1.73
PCDHA6-203ENST00000529310 KRTAP6-2Q3LI66 62 aa4.25□□□□□ -1.73
PCDHA6-203ENST00000529310 KRTAP6-1Q3LI64 71 aa4.22□□□□□ -1.73
PCDHA6-203ENST00000529310 KRTAP9-6A8MVA2 160 aa4.2□□□□□ -1.74
PCDHA6-203ENST00000529310 KRTAP9-4Q9BYQ2 154 aa4.16□□□□□ -1.74
PCDHA6-203ENST00000529310 USH2AO75445 5202 aa4.14□□□□□ -1.75
PCDHA6-203ENST00000529310 KRTAP5-9P26371 169 aa3.99□□□□□ -1.77
PCDHA6-203ENST00000529310 DSTQ03001 7570 aaKnown RBP3.97□□□□□ -1.77
PCDHA6-203ENST00000529310 LCE1CQ5T751 118 aa3.97□□□□□ -1.77
PCDHA6-203ENST00000529310 LCE1EQ5T753 118 aa3.97□□□□□ -1.77
PCDHA6-203ENST00000529310 LCE1FQ5T754 118 aa3.97□□□□□ -1.77
PCDHA6-203ENST00000529310 FCGBPQ9Y6R7 5405 aaPredicted RBP3.94□□□□□ -1.78
PCDHA6-203ENST00000529310 MACF1Q9UPN3 7388 aaKnown RBP3.92□□□□□ -1.78
PCDHA6-203ENST00000529310 KMT2DO14686 5537 aa3.88□□□□□ -1.79
PCDHA6-203ENST00000529310 NEBP20929 6669 aa3.84□□□□□ -1.79
PCDHA6-203ENST00000529310 SSPOA2VEC9 5147 aa3.82□□□□□ -1.8
PCDHA6-203ENST00000529310 KRTAP9-9Q9BYP9 154 aa3.8□□□□□ -1.8
PCDHA6-203ENST00000529310 MUC12Q9UKN1 5478 aa3.67□□□□□ -1.82
PCDHA6-203ENST00000529310 KRTAP4-6Q9BYQ5 205 aa3.58□□□□□ -1.84
PCDHA6-203ENST00000529310 KRTAP20-2Q3LI61 65 aa3.57□□□□□ -1.84
PCDHA6-203ENST00000529310 MDN1Q9NU22 5596 aa3.57□□□□□ -1.84
PCDHA6-203ENST00000529310 KRTAP4-11Q9BYQ6 195 aa3.57□□□□□ -1.84
PCDHA6-203ENST00000529310 GPR98Q8WXG9 6306 aa3.5□□□□□ -1.85
PCDHA6-203ENST00000529310 MUC19Q7Z5P9 8384 aa3.5□□□□□ -1.85
PCDHA6-203ENST00000529310 KRTAP5-4Q6L8H1 288 aa3.42□□□□□ -1.86
PCDHA6-203ENST00000529310 KRTAP5-5Q701N2 237 aaPredicted RBP3.26□□□□□ -1.89
PCDHA6-203ENST00000529310 KRTAP4-4Q9BYR3 166 aa3.23□□□□□ -1.89
PCDHA6-203ENST00000529310 KRTAP4-12Q9BQ66 201 aa3.12□□□□□ -1.91
PCDHA6-203ENST00000529310 KRTAP4-2Q9BYR5 136 aa3.12□□□□□ -1.91
PCDHA6-203ENST00000529310 KRTAP5-3Q6L8H2 238 aa3.02□□□□□ -1.93
PCDHA6-203ENST00000529310 AHNAK2Q8IVF2 5795 aa2.89□□□□□ -1.95
PCDHA6-203ENST00000529310 MUC5ACP98088 5654 aa2.86□□□□□ -1.95
PCDHA6-203ENST00000529310 KRTAP5-2Q701N4 177 aa2.8□□□□□ -1.96
PCDHA6-203ENST00000529310 HMCN1Q96RW7 5635 aa2.79□□□□□ -1.96
PCDHA6-203ENST00000529310 KRTAP5-8O75690 187 aa2.73□□□□□ -1.97
PCDHA6-203ENST00000529310 KRTAP5-10Q6L8G5 202 aa2.5□□□□□ -2.01
PCDHA6-203ENST00000529310 PHGR1C9JFL3 82 aa2.48□□□□□ -2.01
PCDHA6-203ENST00000529310 KRTAP5-11Q6L8G4 156 aa2.41□□□□□ -2.02
PCDHA6-203ENST00000529310 MUC5BQ9HC84 5762 aaPredicted RBP2.41□□□□□ -2.02
PCDHA6-203ENST00000529310 KRTAP5-1Q6L8H4 278 aa2.38□□□□□ -2.03
PCDHA6-203ENST00000529310 AHNAKQ09666 5890 aaKnown RBP2.36□□□□□ -2.03
PCDHA6-203ENST00000529310 KRTAP5-7Q6L8G8 165 aa2.26□□□□□ -2.05
PCDHA6-203ENST00000529310 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.26□□□□□ -2.05
PCDHA6-203ENST00000529310 KRTAP21-2Q3LI59 83 aa2.17□□□□□ -2.06
PCDHA6-203ENST00000529310 KRTAP21-1Q3LI58 79 aa2.14□□□□□ -2.07
PCDHA6-203ENST00000529310 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 162.4 ms