RNA–Protein interactions for RNA: ENST00000529263.6

CTSH-208, Transcript of cathepsin H, human

TSL 5

Gene CTSH, Length 770 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSH-208	ENST00000529263	CDC42SE1	Q9NRR8	79 aa		4.28	□□□□□ -1.72
CTSH-208	ENST00000529263	MT1E	P04732	61 aa		4.27	□□□□□ -1.73
CTSH-208	ENST00000529263	LCE3A	Q5TA76	89 aa		4.27	□□□□□ -1.73
CTSH-208	ENST00000529263	KRTAP19-5	Q3LI72	72 aa		4.26	□□□□□ -1.73
CTSH-208	ENST00000529263	KRTAP25-1	Q3LHN0	102 aa		4.25	□□□□□ -1.73
CTSH-208	ENST00000529263	KRTAP4-11	Q9BYQ6	195 aa		4.23	□□□□□ -1.73
CTSH-208	ENST00000529263	KRTAP20-1	Q3LI63	56 aa		4.21	□□□□□ -1.74
CTSH-208	ENST00000529263	KRTAP2-3	P0C7H8	128 aa		4.2	□□□□□ -1.74
CTSH-208	ENST00000529263	KRTAP2-4	Q9BYR9	128 aa		4.2	□□□□□ -1.74
CTSH-208	ENST00000529263	SPRR2D	P22532	72 aa		4.19	□□□□□ -1.74
CTSH-208	ENST00000529263	KRTAP19-3	Q7Z4W3	81 aa		4.19	□□□□□ -1.74
CTSH-208	ENST00000529263	LCE5A	Q5TCM9	118 aa		4.18	□□□□□ -1.74
CTSH-208	ENST00000529263	KRTAP5-3	Q6L8H2	238 aa		4.17	□□□□□ -1.74
CTSH-208	ENST00000529263	ROMO1	P60602	79 aa		4.15	□□□□□ -1.75
CTSH-208	ENST00000529263	KRTAP23-1	A1A580	65 aa		4.14	□□□□□ -1.75
CTSH-208	ENST00000529263	MT1G	P13640	62 aa		4.14	□□□□□ -1.75
CTSH-208	ENST00000529263	KRTAP12-3	P60328	96 aa		4.12	□□□□□ -1.75
CTSH-208	ENST00000529263	MT1L	Q93083	61 aa		4.12	□□□□□ -1.75
CTSH-208	ENST00000529263	KRTAP2-2	Q9BYT5	123 aa		4.08	□□□□□ -1.76
CTSH-208	ENST00000529263	KRTAP2-1	Q9BYU5	128 aa		4.08	□□□□□ -1.76
CTSH-208	ENST00000529263	PP632	Q6XCG6	107 aa		4.06	□□□□□ -1.76
CTSH-208	ENST00000529263	MT1M	Q8N339	61 aa		4.05	□□□□□ -1.76
CTSH-208	ENST00000529263	DST	Q03001	7570 aa	Known RBP	4.05	□□□□□ -1.76
CTSH-208	ENST00000529263	BRK1	Q8WUW1	75 aa		4.03	□□□□□ -1.76
CTSH-208	ENST00000529263	KRTAP19-4	Q3LI73	84 aa		3.96	□□□□□ -1.78
CTSH-208	ENST00000529263	KRTAP15-1	Q3LI76	137 aa		3.94	□□□□□ -1.78
CTSH-208	ENST00000529263	KRTAP4-3	Q9BYR4	195 aa		3.93	□□□□□ -1.78
CTSH-208	ENST00000529263	LCE4A	Q5TA78	99 aa		3.92	□□□□□ -1.78
CTSH-208	ENST00000529263	PMAIP1	Q13794	54 aa		3.82	□□□□□ -1.8
CTSH-208	ENST00000529263	LCE3C	Q5T5A8	94 aa		3.82	□□□□□ -1.8
CTSH-208	ENST00000529263	KRTAP5-4	Q6L8H1	288 aa		3.75	□□□□□ -1.81
CTSH-208	ENST00000529263	PRO0628	Q9UI54	55 aa		3.74	□□□□□ -1.81
CTSH-208	ENST00000529263	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.7	□□□□□ -1.82
CTSH-208	ENST00000529263	HMCN1	Q96RW7	5635 aa		3.65	□□□□□ -1.82
CTSH-208	ENST00000529263	MT4	P47944	62 aa		3.64	□□□□□ -1.83
CTSH-208	ENST00000529263	SYNE1	Q8NF91	8797 aa	Known RBP	3.62	□□□□□ -1.83
CTSH-208	ENST00000529263	PRAC1	Q96KF2	57 aa		3.62	□□□□□ -1.83
CTSH-208	ENST00000529263	KRTAP9-6	A8MVA2	160 aa		3.61	□□□□□ -1.83
CTSH-208	ENST00000529263	SPRR5	A0A1B0GTR4	108 aa		3.53	□□□□□ -1.84
CTSH-208	ENST00000529263	KRTAP12-4	P60329	112 aa		3.53	□□□□□ -1.84
CTSH-208	ENST00000529263	GPR98	Q8WXG9	6306 aa		3.52	□□□□□ -1.85
CTSH-208	ENST00000529263	MT1A	P04731	61 aa		3.51	□□□□□ -1.85
CTSH-208	ENST00000529263	KTN1-AS1	Q86SY8	53 aa		3.51	□□□□□ -1.85
CTSH-208	ENST00000529263	KRTAP20-2	Q3LI61	65 aa		3.5	□□□□□ -1.85
CTSH-208	ENST00000529263	KRTAP6-1	Q3LI64	71 aa		3.47	□□□□□ -1.85
CTSH-208	ENST00000529263	AHNAK2	Q8IVF2	5795 aa		3.45	□□□□□ -1.86
CTSH-208	ENST00000529263	KRTAP5-2	Q701N4	177 aa		3.32	□□□□□ -1.88
CTSH-208	ENST00000529263	KRTAP5-10	Q6L8G5	202 aa		3.31	□□□□□ -1.88
CTSH-208	ENST00000529263	SVIP	Q8NHG7	77 aa		3.28	□□□□□ -1.88
CTSH-208	ENST00000529263	KRTAP6-2	Q3LI66	62 aa		3.27	□□□□□ -1.89
CTSH-208	ENST00000529263	MT3	P25713	68 aa		3.21	□□□□□ -1.9
CTSH-208	ENST00000529263	KRTAP5-7	Q6L8G8	165 aa		3.15	□□□□□ -1.91
CTSH-208	ENST00000529263	OBSCN	Q5VST9	7968 aa		3.1	□□□□□ -1.91
CTSH-208	ENST00000529263		H3BS24	57 aa		3.06	□□□□□ -1.92
CTSH-208	ENST00000529263	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.06	□□□□□ -1.92
CTSH-208	ENST00000529263	KRTAP5-8	O75690	187 aa		3.04	□□□□□ -1.92
CTSH-208	ENST00000529263	LUZP6	Q538Z0	58 aa		3.01	□□□□□ -1.93
CTSH-208	ENST00000529263	MUC5AC	P98088	5654 aa		2.97	□□□□□ -1.93
CTSH-208	ENST00000529263	KRTAP5-1	Q6L8H4	278 aa		2.94	□□□□□ -1.94
CTSH-208	ENST00000529263	LCE1E	Q5T753	118 aa		2.91	□□□□□ -1.94
CTSH-208	ENST00000529263	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.84	□□□□□ -1.95
CTSH-208	ENST00000529263	AHNAK	Q09666	5890 aa	Known RBP	2.82	□□□□□ -1.96
CTSH-208	ENST00000529263	KRTAP5-11	Q6L8G4	156 aa		2.8	□□□□□ -1.96
CTSH-208	ENST00000529263	LCE3D	Q9BYE3	92 aa		2.8	□□□□□ -1.96
CTSH-208	ENST00000529263	LCE1C	Q5T751	118 aa		2.69	□□□□□ -1.98
CTSH-208	ENST00000529263	LCE1B	Q5T7P3	118 aa		2.69	□□□□□ -1.98
CTSH-208	ENST00000529263	LCE3E	Q5T5B0	92 aa		2.68	□□□□□ -1.98
CTSH-208	ENST00000529263	NDUFAF8	A1L188	74 aa		2.63	□□□□□ -1.99
CTSH-208	ENST00000529263	KRTAP4-4	Q9BYR3	166 aa		2.51	□□□□□ -2.01
CTSH-208	ENST00000529263	KRTAP21-2	Q3LI59	83 aa		2.3	□□□□□ -2.04
CTSH-208	ENST00000529263	LCE1F	Q5T754	118 aa		2.3	□□□□□ -2.04
CTSH-208	ENST00000529263		A0A0A0MQY5	61 aa		2.19	□□□□□ -2.06
CTSH-208	ENST00000529263	INE1	O15225	51 aa		2.17	□□□□□ -2.06
CTSH-208	ENST00000529263	PRM1	P04553	51 aa		2.12	□□□□□ -2.07
CTSH-208	ENST00000529263	PHGR1	C9JFL3	82 aa		2.07	□□□□□ -2.08
CTSH-208	ENST00000529263	MUC19	Q7Z5P9	8384 aa		1.93	□□□□□ -2.1
CTSH-208	ENST00000529263	KRTAP21-1	Q3LI58	79 aa		1.44	□□□□□ -2.18
CTSH-208	ENST00000529263	MUC16	Q8WXI7	14507 aa		1.33	□□□□□ -2.2

Retrieved 78 of 20,778 RNA–protein pairs in 119.8 ms