RNA–Protein interactions for RNA: ENST00000529006.6

KDM2A-210, Transcript of lysine demethylase 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM2A, Length 6,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-210ENST00000529006 LCE1DQ5T752 114 aa3.89□□□□□ -1.79
KDM2A-210ENST00000529006 PRM1P04553 51 aa3.88□□□□□ -1.79
KDM2A-210ENST00000529006 KMT2DO14686 5537 aa3.87□□□□□ -1.79
KDM2A-210ENST00000529006 MT1LQ93083 61 aa3.84□□□□□ -1.79
KDM2A-210ENST00000529006 MT3P25713 68 aa3.84□□□□□ -1.8
KDM2A-210ENST00000529006 LOC100996750A0A140TA64 210 aa3.8□□□□□ -1.8
KDM2A-210ENST00000529006 UBR4Q5T4S7 5183 aa3.8□□□□□ -1.8
KDM2A-210ENST00000529006 MT1EP04732 61 aa3.79□□□□□ -1.8
KDM2A-210ENST00000529006 MT1MQ8N339 61 aa3.73□□□□□ -1.81
KDM2A-210ENST00000529006 BIRC6Q9NR09 4857 aa3.73□□□□□ -1.81
KDM2A-210ENST00000529006 LCE5AQ5TCM9 118 aa3.73□□□□□ -1.81
KDM2A-210ENST00000529006 KRTAP4-3Q9BYR4 195 aa3.71□□□□□ -1.81
KDM2A-210ENST00000529006 FSIP2Q5CZC0 6907 aa3.71□□□□□ -1.82
KDM2A-210ENST00000529006 KRTAP9-2Q9BYQ4 174 aa3.7□□□□□ -1.82
KDM2A-210ENST00000529006 USH2AO75445 5202 aa3.68□□□□□ -1.82
KDM2A-210ENST00000529006 KRTAP19-6Q3LI70 58 aa3.62□□□□□ -1.83
KDM2A-210ENST00000529006 KRTAP20-1Q3LI63 56 aa3.59□□□□□ -1.84
KDM2A-210ENST00000529006 KRTAP9-6A8MVA2 160 aa3.58□□□□□ -1.84
KDM2A-210ENST00000529006 KRTAP4-9Q9BYQ8 210 aa3.57□□□□□ -1.84
KDM2A-210ENST00000529006 KRTAP9-6A0A140TA67 174 aa3.54□□□□□ -1.84
KDM2A-210ENST00000529006 LCE1CQ5T751 118 aa3.51□□□□□ -1.85
KDM2A-210ENST00000529006 LCE1EQ5T753 118 aa3.51□□□□□ -1.85
KDM2A-210ENST00000529006 LCE1FQ5T754 118 aa3.51□□□□□ -1.85
KDM2A-210ENST00000529006 LCE1AQ5T7P2 110 aa3.51□□□□□ -1.85
KDM2A-210ENST00000529006 DSTQ03001 7570 aaKnown RBP3.46□□□□□ -1.85
KDM2A-210ENST00000529006 MT1AP04731 61 aa3.46□□□□□ -1.86
KDM2A-210ENST00000529006 FCGBPQ9Y6R7 5405 aaPredicted RBP3.42□□□□□ -1.86
KDM2A-210ENST00000529006 OBSCNQ5VST9 7968 aa3.42□□□□□ -1.86
KDM2A-210ENST00000529006 KRTAP2-3P0C7H8 128 aa3.42□□□□□ -1.86
KDM2A-210ENST00000529006 KRTAP2-4Q9BYR9 128 aa3.42□□□□□ -1.86
KDM2A-210ENST00000529006 KRTAP2-1Q9BYU5 128 aa3.42□□□□□ -1.86
KDM2A-210ENST00000529006 SYNE2Q8WXH0 6885 aaKnown RBP3.39□□□□□ -1.87
KDM2A-210ENST00000529006 SYNE1Q8NF91 8797 aaKnown RBP3.38□□□□□ -1.87
KDM2A-210ENST00000529006 KRTAP19-7Q3SYF9 63 aa3.37□□□□□ -1.87
KDM2A-210ENST00000529006 KRTAP9-7A8MTY7 169 aa3.35□□□□□ -1.87
KDM2A-210ENST00000529006 KRTAP6-2Q3LI66 62 aa3.34□□□□□ -1.87
KDM2A-210ENST00000529006 KRTAP6-1Q3LI64 71 aa3.27□□□□□ -1.89
KDM2A-210ENST00000529006 KRTAP9-4Q9BYQ2 154 aa3.25□□□□□ -1.89
KDM2A-210ENST00000529006 MUC12Q9UKN1 5478 aa3.24□□□□□ -1.89
KDM2A-210ENST00000529006 LCE4AQ5TA78 99 aa3.22□□□□□ -1.89
KDM2A-210ENST00000529006 KRTAP6-3Q3LI67 103 aa3.2□□□□□ -1.9
KDM2A-210ENST00000529006 KRTAP2-2Q9BYT5 123 aa3.15□□□□□ -1.9
KDM2A-210ENST00000529006 SSPOA2VEC9 5147 aa3.13□□□□□ -1.91
KDM2A-210ENST00000529006 LCE2AQ5TA79 106 aaPredicted RBP3.13□□□□□ -1.91
KDM2A-210ENST00000529006 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.12□□□□□ -1.91
KDM2A-210ENST00000529006 KRTAP9-9Q9BYP9 154 aa3.06□□□□□ -1.92
KDM2A-210ENST00000529006 MACF1Q9UPN3 7388 aaKnown RBP2.89□□□□□ -1.95
KDM2A-210ENST00000529006 KRTAP4-11Q9BYQ6 195 aa2.87□□□□□ -1.95
KDM2A-210ENST00000529006 KRTAP20-2Q3LI61 65 aa2.87□□□□□ -1.95
KDM2A-210ENST00000529006 KRTAP5-5Q701N2 237 aaPredicted RBP2.74□□□□□ -1.97
KDM2A-210ENST00000529006 KRTAP4-4Q9BYR3 166 aa2.74□□□□□ -1.97
KDM2A-210ENST00000529006 KRTAP4-6Q9BYQ5 205 aa2.71□□□□□ -1.98
KDM2A-210ENST00000529006 MDN1Q9NU22 5596 aa2.71□□□□□ -1.98
KDM2A-210ENST00000529006 KRTAP4-12Q9BQ66 201 aa2.7□□□□□ -1.98
KDM2A-210ENST00000529006 KRTAP4-2Q9BYR5 136 aa2.7□□□□□ -1.98
KDM2A-210ENST00000529006 MUC19Q7Z5P9 8384 aa2.6□□□□□ -1.99
KDM2A-210ENST00000529006 NEBP20929 6669 aa2.51□□□□□ -2.01
KDM2A-210ENST00000529006 KRTAP5-9P26371 169 aa2.42□□□□□ -2.02
KDM2A-210ENST00000529006 KRTAP5-4Q6L8H1 288 aa2.37□□□□□ -2.03
KDM2A-210ENST00000529006 MUC5ACP98088 5654 aa2.1□□□□□ -2.07
KDM2A-210ENST00000529006 PHGR1C9JFL3 82 aa2.05□□□□□ -2.08
KDM2A-210ENST00000529006 KRTAP5-3Q6L8H2 238 aa2.03□□□□□ -2.08
KDM2A-210ENST00000529006 KRTAP5-10Q6L8G5 202 aa1.96□□□□□ -2.1
KDM2A-210ENST00000529006 HMCN1Q96RW7 5635 aa1.95□□□□□ -2.1
KDM2A-210ENST00000529006 KRTAP5-8O75690 187 aa1.91□□□□□ -2.1
KDM2A-210ENST00000529006 GPR98Q8WXG9 6306 aa1.86□□□□□ -2.11
KDM2A-210ENST00000529006 KRTAP5-2Q701N4 177 aa1.79□□□□□ -2.12
KDM2A-210ENST00000529006 KRTAP21-2Q3LI59 83 aa1.7□□□□□ -2.14
KDM2A-210ENST00000529006 KRTAP5-1Q6L8H4 278 aa1.7□□□□□ -2.14
KDM2A-210ENST00000529006 MUC5BQ9HC84 5762 aaPredicted RBP1.63□□□□□ -2.15
KDM2A-210ENST00000529006 KRTAP21-1Q3LI58 79 aa1.61□□□□□ -2.15
KDM2A-210ENST00000529006 AHNAK2Q8IVF2 5795 aa1.58□□□□□ -2.16
KDM2A-210ENST00000529006 KRTAP5-11Q6L8G4 156 aa1.53□□□□□ -2.17
KDM2A-210ENST00000529006 KRTAP5-7Q6L8G8 165 aa1.38□□□□□ -2.19
KDM2A-210ENST00000529006 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.37□□□□□ -2.19
KDM2A-210ENST00000529006 AHNAKQ09666 5890 aaKnown RBP1.36□□□□□ -2.19
KDM2A-210ENST00000529006 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 83.3 ms