RNA–Protein interactions for RNA: ENST00000528906.5

PSMD13-208, Transcript of proteasome 26S subunit, non-ATPase 13, human

TSL 5

Gene PSMD13, Length 858 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD13-208	ENST00000528906	LCE3A	Q5TA76	89 aa		5	□□□□□ -1.61
PSMD13-208	ENST00000528906	KRTAP8-1	Q8IUC2	63 aa		5	□□□□□ -1.61
PSMD13-208	ENST00000528906	MACF1	Q9UPN3	7388 aa	Known RBP	4.96	□□□□□ -1.62
PSMD13-208	ENST00000528906	KTN1-AS1	Q86SY8	53 aa		4.96	□□□□□ -1.62
PSMD13-208	ENST00000528906	KMT2D	O14686	5537 aa		4.92	□□□□□ -1.62
PSMD13-208	ENST00000528906	KRTAP6-3	Q3LI67	103 aa		4.91	□□□□□ -1.62
PSMD13-208	ENST00000528906	KRTAP5-9	P26371	169 aa		4.87	□□□□□ -1.63
PSMD13-208	ENST00000528906	KRTAP19-5	Q3LI72	72 aa		4.87	□□□□□ -1.63
PSMD13-208	ENST00000528906	PRAC1	Q96KF2	57 aa		4.87	□□□□□ -1.63
PSMD13-208	ENST00000528906	SYNE2	Q8WXH0	6885 aa	Known RBP	4.86	□□□□□ -1.63
PSMD13-208	ENST00000528906	KRTAP12-3	P60328	96 aa		4.85	□□□□□ -1.63
PSMD13-208	ENST00000528906	KRTAP19-7	Q3SYF9	63 aa		4.85	□□□□□ -1.63
PSMD13-208	ENST00000528906	SPRR2F	Q96RM1	72 aa		4.84	□□□□□ -1.63
PSMD13-208	ENST00000528906	MT1E	P04732	61 aa		4.79	□□□□□ -1.64
PSMD13-208	ENST00000528906	KRTAP15-1	Q3LI76	137 aa		4.71	□□□□□ -1.66
PSMD13-208	ENST00000528906	LCE1A	Q5T7P2	110 aa		4.66	□□□□□ -1.66
PSMD13-208	ENST00000528906	KRTAP19-3	Q7Z4W3	81 aa		4.66	□□□□□ -1.66
PSMD13-208	ENST00000528906	MT1L	Q93083	61 aa		4.66	□□□□□ -1.66
PSMD13-208	ENST00000528906	MUC12	Q9UKN1	5478 aa		4.65	□□□□□ -1.66
PSMD13-208	ENST00000528906	SPRR2E	P22531	72 aa		4.64	□□□□□ -1.67
PSMD13-208	ENST00000528906	SPRR2B	P35325	72 aa		4.64	□□□□□ -1.67
PSMD13-208	ENST00000528906	SPRR2A	P35326	72 aa		4.64	□□□□□ -1.67
PSMD13-208	ENST00000528906	MT1G	P13640	62 aa		4.63	□□□□□ -1.67
PSMD13-208	ENST00000528906	MDN1	Q9NU22	5596 aa		4.6	□□□□□ -1.67
PSMD13-208	ENST00000528906	NEB	P20929	6669 aa		4.56	□□□□□ -1.68
PSMD13-208	ENST00000528906	MT1M	Q8N339	61 aa		4.52	□□□□□ -1.69
PSMD13-208	ENST00000528906	LCE3C	Q5T5A8	94 aa		4.51	□□□□□ -1.69
PSMD13-208	ENST00000528906	SPRR2D	P22532	72 aa		4.49	□□□□□ -1.69
PSMD13-208	ENST00000528906	KRTAP4-3	Q9BYR4	195 aa		4.36	□□□□□ -1.71
PSMD13-208	ENST00000528906	KRTAP2-3	P0C7H8	128 aa		4.34	□□□□□ -1.71
PSMD13-208	ENST00000528906	KRTAP2-4	Q9BYR9	128 aa		4.34	□□□□□ -1.71
PSMD13-208	ENST00000528906	SPRR5	A0A1B0GTR4	108 aa		4.29	□□□□□ -1.72
PSMD13-208	ENST00000528906	KRTAP20-1	Q3LI63	56 aa		4.29	□□□□□ -1.72
PSMD13-208	ENST00000528906	KRTAP2-2	Q9BYT5	123 aa		4.23	□□□□□ -1.73
PSMD13-208	ENST00000528906	KRTAP2-1	Q9BYU5	128 aa		4.23	□□□□□ -1.73
PSMD13-208	ENST00000528906	DST	Q03001	7570 aa	Known RBP	4.2	□□□□□ -1.74
PSMD13-208	ENST00000528906	KRTAP9-6	A8MVA2	160 aa		4.19	□□□□□ -1.74
PSMD13-208	ENST00000528906	LUZP6	Q538Z0	58 aa		4.11	□□□□□ -1.75
PSMD13-208	ENST00000528906	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.09	□□□□□ -1.75
PSMD13-208	ENST00000528906	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.06	□□□□□ -1.76
PSMD13-208	ENST00000528906		A0A0A0MQY5	61 aa		4.03	□□□□□ -1.76
PSMD13-208	ENST00000528906	KRTAP5-4	Q6L8H1	288 aa		4.02	□□□□□ -1.77
PSMD13-208	ENST00000528906	KRTAP5-11	Q6L8G4	156 aa		4	□□□□□ -1.77
PSMD13-208	ENST00000528906	MT1A	P04731	61 aa		3.99	□□□□□ -1.77
PSMD13-208	ENST00000528906	KRTAP12-4	P60329	112 aa		3.92	□□□□□ -1.78
PSMD13-208	ENST00000528906	KRTAP6-1	Q3LI64	71 aa		3.91	□□□□□ -1.78
PSMD13-208	ENST00000528906	MT4	P47944	62 aa		3.87	□□□□□ -1.79
PSMD13-208	ENST00000528906	SYNE1	Q8NF91	8797 aa	Known RBP	3.85	□□□□□ -1.79
PSMD13-208	ENST00000528906	NDUFAF8	A1L188	74 aa		3.79	□□□□□ -1.8
PSMD13-208	ENST00000528906	HMCN1	Q96RW7	5635 aa		3.77	□□□□□ -1.81
PSMD13-208	ENST00000528906	KRTAP20-2	Q3LI61	65 aa		3.75	□□□□□ -1.81
PSMD13-208	ENST00000528906	MT3	P25713	68 aa		3.65	□□□□□ -1.83
PSMD13-208	ENST00000528906	LCE1E	Q5T753	118 aa		3.65	□□□□□ -1.83
PSMD13-208	ENST00000528906	KRTAP6-2	Q3LI66	62 aa		3.64	□□□□□ -1.83
PSMD13-208	ENST00000528906	KRTAP5-2	Q701N4	177 aa		3.61	□□□□□ -1.83
PSMD13-208	ENST00000528906	KRTAP5-1	Q6L8H4	278 aa		3.55	□□□□□ -1.84
PSMD13-208	ENST00000528906	GPR98	Q8WXG9	6306 aa		3.48	□□□□□ -1.85
PSMD13-208	ENST00000528906	KRTAP4-4	Q9BYR3	166 aa		3.43	□□□□□ -1.86
PSMD13-208	ENST00000528906	AHNAK2	Q8IVF2	5795 aa		3.43	□□□□□ -1.86
PSMD13-208	ENST00000528906	LCE3D	Q9BYE3	92 aa		3.37	□□□□□ -1.87
PSMD13-208	ENST00000528906	KRTAP5-10	Q6L8G5	202 aa		3.32	□□□□□ -1.88
PSMD13-208	ENST00000528906	LCE3E	Q5T5B0	92 aa		3.26	□□□□□ -1.89
PSMD13-208	ENST00000528906	OBSCN	Q5VST9	7968 aa		3.25	□□□□□ -1.89
PSMD13-208	ENST00000528906	INE1	O15225	51 aa		3.19	□□□□□ -1.9
PSMD13-208	ENST00000528906	KRTAP5-8	O75690	187 aa		3.18	□□□□□ -1.9
PSMD13-208	ENST00000528906	KRTAP5-7	Q6L8G8	165 aa		3.13	□□□□□ -1.91
PSMD13-208	ENST00000528906	MUC5AC	P98088	5654 aa		3.07	□□□□□ -1.92
PSMD13-208	ENST00000528906	LCE1C	Q5T751	118 aa		2.99	□□□□□ -1.93
PSMD13-208	ENST00000528906	LCE1B	Q5T7P3	118 aa		2.99	□□□□□ -1.93
PSMD13-208	ENST00000528906	LCE1F	Q5T754	118 aa		2.95	□□□□□ -1.94
PSMD13-208	ENST00000528906	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.79	□□□□□ -1.96
PSMD13-208	ENST00000528906	AHNAK	Q09666	5890 aa	Known RBP	2.73	□□□□□ -1.97
PSMD13-208	ENST00000528906	PRM1	P04553	51 aa		2.7	□□□□□ -1.98
PSMD13-208	ENST00000528906	KRTAP21-2	Q3LI59	83 aa		2.57	□□□□□ -2
PSMD13-208	ENST00000528906	PHGR1	C9JFL3	82 aa		2.27	□□□□□ -2.05
PSMD13-208	ENST00000528906	MUC19	Q7Z5P9	8384 aa		2.04	□□□□□ -2.08
PSMD13-208	ENST00000528906	KRTAP21-1	Q3LI58	79 aa		1.63	□□□□□ -2.15
PSMD13-208	ENST00000528906	MUC16	Q8WXI7	14507 aa		1.44	□□□□□ -2.18

Retrieved 78 of 20,778 RNA–protein pairs in 196.3 ms