RNA–Protein interactions for RNA: ENST00000528669.5

TM9SF1-206, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5 BASIC

Gene TM9SF1, Length 2,425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-206ENST00000528669 KRTAP19-6Q3LI70 58 aa6.38□□□□□ -1.39
TM9SF1-206ENST00000528669 KRTAP19-4Q3LI73 84 aa6.37□□□□□ -1.39
TM9SF1-206ENST00000528669 KRTAP9-6A0A140TA67 174 aa6.34□□□□□ -1.4
TM9SF1-206ENST00000528669 CRCT1Q9UGL9 99 aa6.33□□□□□ -1.4
TM9SF1-206ENST00000528669 FCGBPQ9Y6R7 5405 aaPredicted RBP6.28□□□□□ -1.4
TM9SF1-206ENST00000528669 KRTAP4-3Q9BYR4 195 aa6.25□□□□□ -1.41
TM9SF1-206ENST00000528669 MUC12Q9UKN1 5478 aa6.23□□□□□ -1.41
TM9SF1-206ENST00000528669 LOC100996750A0A140TA64 210 aa6.22□□□□□ -1.41
TM9SF1-206ENST00000528669 MT1GP13640 62 aa6.15□□□□□ -1.43
TM9SF1-206ENST00000528669 MT1MQ8N339 61 aa6.1□□□□□ -1.43
TM9SF1-206ENST00000528669 KRTAP19-3Q7Z4W3 81 aa6.09□□□□□ -1.43
TM9SF1-206ENST00000528669 DSTQ03001 7570 aaKnown RBP5.96□□□□□ -1.46
TM9SF1-206ENST00000528669 SPRR2FQ96RM1 72 aa5.9□□□□□ -1.46
TM9SF1-206ENST00000528669 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.89□□□□□ -1.47
TM9SF1-206ENST00000528669 LCE5AQ5TCM9 118 aa5.87□□□□□ -1.47
TM9SF1-206ENST00000528669 MACF1Q9UPN3 7388 aaKnown RBP5.85□□□□□ -1.47
TM9SF1-206ENST00000528669 SYNE2Q8WXH0 6885 aaKnown RBP5.76□□□□□ -1.49
TM9SF1-206ENST00000528669 KRTAP9-7A8MTY7 169 aa5.74□□□□□ -1.49
TM9SF1-206ENST00000528669 KRTAP12-4P60329 112 aa5.7□□□□□ -1.5
TM9SF1-206ENST00000528669 LCE3BQ5TA77 95 aa5.69□□□□□ -1.5
TM9SF1-206ENST00000528669 MDN1Q9NU22 5596 aa5.63□□□□□ -1.51
TM9SF1-206ENST00000528669 KRTAP4-9Q9BYQ8 210 aa5.6□□□□□ -1.51
TM9SF1-206ENST00000528669 KRTAP6-1Q3LI64 71 aa5.57□□□□□ -1.52
TM9SF1-206ENST00000528669 KRTAP6-3Q3LI67 103 aa5.57□□□□□ -1.52
TM9SF1-206ENST00000528669 SYNE1Q8NF91 8797 aaKnown RBP5.54□□□□□ -1.52
TM9SF1-206ENST00000528669 LCE1AQ5T7P2 110 aa5.47□□□□□ -1.53
TM9SF1-206ENST00000528669 MT1AP04731 61 aa5.46□□□□□ -1.54
TM9SF1-206ENST00000528669 KRTAP5-9P26371 169 aa5.44□□□□□ -1.54
TM9SF1-206ENST00000528669 KRTAP5-5Q701N2 237 aaPredicted RBP5.36□□□□□ -1.55
TM9SF1-206ENST00000528669 SPRR2EP22531 72 aa5.35□□□□□ -1.55
TM9SF1-206ENST00000528669 SPRR2BP35325 72 aa5.35□□□□□ -1.55
TM9SF1-206ENST00000528669 SPRR2AP35326 72 aa5.35□□□□□ -1.55
TM9SF1-206ENST00000528669 LCE3DQ9BYE3 92 aa5.32□□□□□ -1.56
TM9SF1-206ENST00000528669 NEBP20929 6669 aa5.31□□□□□ -1.56
TM9SF1-206ENST00000528669 LCE3EQ5T5B0 92 aa5.24□□□□□ -1.57
TM9SF1-206ENST00000528669 KRTAP9-4Q9BYQ2 154 aa5.14□□□□□ -1.59
TM9SF1-206ENST00000528669 SPRR2DP22532 72 aa5.11□□□□□ -1.59
TM9SF1-206ENST00000528669 PRM1P04553 51 aa5.06□□□□□ -1.6
TM9SF1-206ENST00000528669 KRTAP20-1Q3LI63 56 aa5.04□□□□□ -1.6
TM9SF1-206ENST00000528669 KRTAP6-2Q3LI66 62 aa4.99□□□□□ -1.61
TM9SF1-206ENST00000528669 OBSCNQ5VST9 7968 aa4.99□□□□□ -1.61
TM9SF1-206ENST00000528669 MT3P25713 68 aa4.9□□□□□ -1.62
TM9SF1-206ENST00000528669 KRTAP2-2Q9BYT5 123 aa4.83□□□□□ -1.64
TM9SF1-206ENST00000528669 KRTAP5-4Q6L8H1 288 aa4.68□□□□□ -1.66
TM9SF1-206ENST00000528669 KRTAP4-6Q9BYQ5 205 aa4.6□□□□□ -1.67
TM9SF1-206ENST00000528669 MT4P47944 62 aa4.55□□□□□ -1.68
TM9SF1-206ENST00000528669 KRTAP20-2Q3LI61 65 aa4.44□□□□□ -1.7
TM9SF1-206ENST00000528669 LCE4AQ5TA78 99 aa4.43□□□□□ -1.7
TM9SF1-206ENST00000528669 LCE1DQ5T752 114 aa4.41□□□□□ -1.7
TM9SF1-206ENST00000528669 KRTAP5-2Q701N4 177 aa4.38□□□□□ -1.71
TM9SF1-206ENST00000528669 HMCN1Q96RW7 5635 aa4.34□□□□□ -1.71
TM9SF1-206ENST00000528669 MUC5ACP98088 5654 aa4.22□□□□□ -1.73
TM9SF1-206ENST00000528669 KRTAP5-3Q6L8H2 238 aa4.21□□□□□ -1.74
TM9SF1-206ENST00000528669 AHNAK2Q8IVF2 5795 aa4.06□□□□□ -1.76
TM9SF1-206ENST00000528669 GPR98Q8WXG9 6306 aa4.04□□□□□ -1.76
TM9SF1-206ENST00000528669 LCE1BQ5T7P3 118 aa4.02□□□□□ -1.77
TM9SF1-206ENST00000528669 LCE1EQ5T753 118 aa3.96□□□□□ -1.78
TM9SF1-206ENST00000528669 KRTAP5-10Q6L8G5 202 aa3.94□□□□□ -1.78
TM9SF1-206ENST00000528669 KRTAP4-11Q9BYQ6 195 aa3.84□□□□□ -1.8
TM9SF1-206ENST00000528669 KRTAP5-1Q6L8H4 278 aa3.82□□□□□ -1.8
TM9SF1-206ENST00000528669 KRTAP4-2Q9BYR5 136 aa3.81□□□□□ -1.8
TM9SF1-206ENST00000528669 LCE1CQ5T751 118 aa3.76□□□□□ -1.81
TM9SF1-206ENST00000528669 KRTAP5-7Q6L8G8 165 aa3.73□□□□□ -1.81
TM9SF1-206ENST00000528669 KRTAP5-8O75690 187 aa3.61□□□□□ -1.83
TM9SF1-206ENST00000528669 KRTAP21-2Q3LI59 83 aa3.57□□□□□ -1.84
TM9SF1-206ENST00000528669 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.53□□□□□ -1.84
TM9SF1-206ENST00000528669 KRTAP9-9Q9BYP9 154 aa3.34□□□□□ -1.87
TM9SF1-206ENST00000528669 KRTAP4-4Q9BYR3 166 aa3.34□□□□□ -1.87
TM9SF1-206ENST00000528669 MUC5BQ9HC84 5762 aaPredicted RBP3.3□□□□□ -1.88
TM9SF1-206ENST00000528669 KRTAP5-11Q6L8G4 156 aa3.22□□□□□ -1.89
TM9SF1-206ENST00000528669 AHNAKQ09666 5890 aaKnown RBP3.21□□□□□ -1.9
TM9SF1-206ENST00000528669 LCE1FQ5T754 118 aa3.2□□□□□ -1.9
TM9SF1-206ENST00000528669 MUC19Q7Z5P9 8384 aa3.17□□□□□ -1.9
TM9SF1-206ENST00000528669 KRTAP4-12Q9BQ66 201 aa3.14□□□□□ -1.91
TM9SF1-206ENST00000528669 KRTAP21-1Q3LI58 79 aa3.13□□□□□ -1.91
TM9SF1-206ENST00000528669 PHGR1C9JFL3 82 aa2.8□□□□□ -1.96
TM9SF1-206ENST00000528669 MUC16Q8WXI7 14507 aa1.89□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 28.4 ms