RNA–Protein interactions for RNA: ENST00000528395.1

TMX2-CTNND1-201, Transcript of TMX2-CTNND1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMX2-CTNND1, Length 585 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1-201ENST00000528395 LCE3AQ5TA76 89 aa4.1□□□□□ -1.75
TMX2-CTNND1-201ENST00000528395 MT1GP13640 62 aa4.07□□□□□ -1.76
TMX2-CTNND1-201ENST00000528395 A6NED7 52 aa4.03□□□□□ -1.76
TMX2-CTNND1-201ENST00000528395 KRTAP25-1Q3LHN0 102 aa4.03□□□□□ -1.76
TMX2-CTNND1-201ENST00000528395 PP632Q6XCG6 107 aa4.03□□□□□ -1.76
TMX2-CTNND1-201ENST00000528395 PRO0628Q9UI54 55 aa4.03□□□□□ -1.76
TMX2-CTNND1-201ENST00000528395 DSTQ03001 7570 aaKnown RBP4.03□□□□□ -1.76
TMX2-CTNND1-201ENST00000528395 MT1LQ93083 61 aa4□□□□□ -1.77
TMX2-CTNND1-201ENST00000528395 LOC100996750A0A140TA64 210 aa3.99□□□□□ -1.77
TMX2-CTNND1-201ENST00000528395 KRTAP4-6Q9BYQ5 205 aa3.99□□□□□ -1.77
TMX2-CTNND1-201ENST00000528395 KRTAP12-3P60328 96 aa3.97□□□□□ -1.77
TMX2-CTNND1-201ENST00000528395 MT1MQ8N339 61 aa3.96□□□□□ -1.78
TMX2-CTNND1-201ENST00000528395 KRTAP23-1A1A580 65 aa3.92□□□□□ -1.78
TMX2-CTNND1-201ENST00000528395 CDC42SE1Q9NRR8 79 aa3.9□□□□□ -1.79
TMX2-CTNND1-201ENST00000528395 ROMO1P60602 79 aa3.84□□□□□ -1.79
TMX2-CTNND1-201ENST00000528395 KRTAP19-4Q3LI73 84 aa3.84□□□□□ -1.79
TMX2-CTNND1-201ENST00000528395 KRTAP4-3Q9BYR4 195 aa3.83□□□□□ -1.8
TMX2-CTNND1-201ENST00000528395 PMAIP1Q13794 54 aa3.8□□□□□ -1.8
TMX2-CTNND1-201ENST00000528395 LCE4AQ5TA78 99 aa3.78□□□□□ -1.8
TMX2-CTNND1-201ENST00000528395 KRTAP4-7Q9BYR0 210 aa3.78□□□□□ -1.8
TMX2-CTNND1-201ENST00000528395 KRTAP4-9Q9BYQ8 210 aa3.76□□□□□ -1.81
TMX2-CTNND1-201ENST00000528395 KRTAP15-1Q3LI76 137 aa3.75□□□□□ -1.81
TMX2-CTNND1-201ENST00000528395 KRTAP5-4Q6L8H1 288 aa3.73□□□□□ -1.81
TMX2-CTNND1-201ENST00000528395 BRK1Q8WUW1 75 aa3.72□□□□□ -1.81
TMX2-CTNND1-201ENST00000528395 LCE1DQ5T752 114 aa3.71□□□□□ -1.82
TMX2-CTNND1-201ENST00000528395 HMCN1Q96RW7 5635 aa3.68□□□□□ -1.82
TMX2-CTNND1-201ENST00000528395 LCE3CQ5T5A8 94 aa3.67□□□□□ -1.82
TMX2-CTNND1-201ENST00000528395 MT4P47944 62 aa3.66□□□□□ -1.82
TMX2-CTNND1-201ENST00000528395 H3BS24 57 aa3.64□□□□□ -1.83
TMX2-CTNND1-201ENST00000528395 KTN1-AS1Q86SY8 53 aa3.64□□□□□ -1.83
TMX2-CTNND1-201ENST00000528395 KRTAP5-5Q701N2 237 aaPredicted RBP3.63□□□□□ -1.83
TMX2-CTNND1-201ENST00000528395 GPR98Q8WXG9 6306 aa3.58□□□□□ -1.84
TMX2-CTNND1-201ENST00000528395 KRTAP4-12Q9BQ66 201 aa3.56□□□□□ -1.84
TMX2-CTNND1-201ENST00000528395 SPRR5A0A1B0GTR4 108 aa3.53□□□□□ -1.84
TMX2-CTNND1-201ENST00000528395 KRTAP12-4P60329 112 aa3.53□□□□□ -1.84
TMX2-CTNND1-201ENST00000528395 SYNE1Q8NF91 8797 aaKnown RBP3.49□□□□□ -1.85
TMX2-CTNND1-201ENST00000528395 KRTAP20-2Q3LI61 65 aa3.49□□□□□ -1.85
TMX2-CTNND1-201ENST00000528395 AHNAK2Q8IVF2 5795 aa3.47□□□□□ -1.85
TMX2-CTNND1-201ENST00000528395 KRTAP9-9Q9BYP9 154 aa3.45□□□□□ -1.86
TMX2-CTNND1-201ENST00000528395 KRTAP9-4Q9BYQ2 154 aa3.45□□□□□ -1.86
TMX2-CTNND1-201ENST00000528395 KRTAP9-6A8MVA2 160 aa3.43□□□□□ -1.86
TMX2-CTNND1-201ENST00000528395 MT1AP04731 61 aa3.42□□□□□ -1.86
TMX2-CTNND1-201ENST00000528395 KRTAP5-10Q6L8G5 202 aa3.39□□□□□ -1.87
TMX2-CTNND1-201ENST00000528395 KRTAP5-3Q6L8H2 238 aa3.39□□□□□ -1.87
TMX2-CTNND1-201ENST00000528395 KRTAP6-1Q3LI64 71 aa3.37□□□□□ -1.87
TMX2-CTNND1-201ENST00000528395 A0A0A0MQY5 61 aa3.35□□□□□ -1.87
TMX2-CTNND1-201ENST00000528395 KRTAP5-2Q701N4 177 aa3.29□□□□□ -1.88
TMX2-CTNND1-201ENST00000528395 KRTAP5-7Q6L8G8 165 aa3.26□□□□□ -1.89
TMX2-CTNND1-201ENST00000528395 PRAC1Q96KF2 57 aa3.23□□□□□ -1.89
TMX2-CTNND1-201ENST00000528395 KRTAP6-2Q3LI66 62 aa3.2□□□□□ -1.9
TMX2-CTNND1-201ENST00000528395 KRTAP4-11Q9BYQ6 195 aa3.17□□□□□ -1.9
TMX2-CTNND1-201ENST00000528395 MT3P25713 68 aa3.14□□□□□ -1.91
TMX2-CTNND1-201ENST00000528395 KRTAP4-2Q9BYR5 136 aa3.11□□□□□ -1.91
TMX2-CTNND1-201ENST00000528395 OBSCNQ5VST9 7968 aa3.1□□□□□ -1.91
TMX2-CTNND1-201ENST00000528395 KRTAP5-8O75690 187 aa3.05□□□□□ -1.92
TMX2-CTNND1-201ENST00000528395 LUZP6Q538Z0 58 aa2.95□□□□□ -1.94
TMX2-CTNND1-201ENST00000528395 KRTAP5-1Q6L8H4 278 aa2.92□□□□□ -1.94
TMX2-CTNND1-201ENST00000528395 NDUFAF8A1L188 74 aa2.9□□□□□ -1.95
TMX2-CTNND1-201ENST00000528395 LCE1EQ5T753 118 aa2.88□□□□□ -1.95
TMX2-CTNND1-201ENST00000528395 MUC5ACP98088 5654 aa2.87□□□□□ -1.95
TMX2-CTNND1-201ENST00000528395 MUC5BQ9HC84 5762 aaPredicted RBP2.86□□□□□ -1.95
TMX2-CTNND1-201ENST00000528395 AHNAKQ09666 5890 aaKnown RBP2.81□□□□□ -1.96
TMX2-CTNND1-201ENST00000528395 LCE3DQ9BYE3 92 aa2.68□□□□□ -1.98
TMX2-CTNND1-201ENST00000528395 LCE1CQ5T751 118 aa2.66□□□□□ -1.98
TMX2-CTNND1-201ENST00000528395 LCE1BQ5T7P3 118 aa2.66□□□□□ -1.98
TMX2-CTNND1-201ENST00000528395 LCE3EQ5T5B0 92 aa2.54□□□□□ -2
TMX2-CTNND1-201ENST00000528395 INE1O15225 51 aa2.51□□□□□ -2.01
TMX2-CTNND1-201ENST00000528395 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.44□□□□□ -2.02
TMX2-CTNND1-201ENST00000528395 KRTAP5-11Q6L8G4 156 aa2.39□□□□□ -2.03
TMX2-CTNND1-201ENST00000528395 LCE1FQ5T754 118 aa2.33□□□□□ -2.04
TMX2-CTNND1-201ENST00000528395 KRTAP21-2Q3LI59 83 aa2.23□□□□□ -2.05
TMX2-CTNND1-201ENST00000528395 PHGR1C9JFL3 82 aa2.06□□□□□ -2.08
TMX2-CTNND1-201ENST00000528395 KRTAP4-4Q9BYR3 166 aa1.99□□□□□ -2.09
TMX2-CTNND1-201ENST00000528395 PRM1P04553 51 aa1.95□□□□□ -2.1
TMX2-CTNND1-201ENST00000528395 MUC19Q7Z5P9 8384 aa1.9□□□□□ -2.11
TMX2-CTNND1-201ENST00000528395 KRTAP21-1Q3LI58 79 aa1.51□□□□□ -2.17
TMX2-CTNND1-201ENST00000528395 MUC16Q8WXI7 14507 aa1.34□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 5.9 ms