RNA–Protein interactions for RNA: ENST00000528276.1

CHEK1-210, Transcript of checkpoint kinase 1, humanhuman

TSL 2

Gene CHEK1, Length 1,814 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-210ENST00000528276 KRTAP4-2Q9BYR5 136 aa5.27□□□□□ -1.57
CHEK1-210ENST00000528276 FCGBPQ9Y6R7 5405 aaPredicted RBP5.25□□□□□ -1.57
CHEK1-210ENST00000528276 KRTAP4-9Q9BYQ8 210 aa5.25□□□□□ -1.57
CHEK1-210ENST00000528276 CRCT1Q9UGL9 99 aa5.22□□□□□ -1.57
CHEK1-210ENST00000528276 KRTAP5-3Q6L8H2 238 aa5.2□□□□□ -1.58
CHEK1-210ENST00000528276 KRTAP19-7Q3SYF9 63 aa5.18□□□□□ -1.58
CHEK1-210ENST00000528276 SPRR5A0A1B0GTR4 108 aa5.12□□□□□ -1.59
CHEK1-210ENST00000528276 NDUFAF8A1L188 74 aa5.11□□□□□ -1.59
CHEK1-210ENST00000528276 LCE4AQ5TA78 99 aa5.11□□□□□ -1.59
CHEK1-210ENST00000528276 MT1EP04732 61 aa5.11□□□□□ -1.59
CHEK1-210ENST00000528276 MACF1Q9UPN3 7388 aaKnown RBP5.07□□□□□ -1.6
CHEK1-210ENST00000528276 LCE3CQ5T5A8 94 aa5.06□□□□□ -1.6
CHEK1-210ENST00000528276 KRTAP19-4Q3LI73 84 aa5.05□□□□□ -1.6
CHEK1-210ENST00000528276 MT1LQ93083 61 aa5.02□□□□□ -1.61
CHEK1-210ENST00000528276 KRTAP4-11Q9BYQ6 195 aa5.02□□□□□ -1.61
CHEK1-210ENST00000528276 SPRR2FQ96RM1 72 aa5□□□□□ -1.61
CHEK1-210ENST00000528276 KRTAP9-7A8MTY7 169 aa5□□□□□ -1.61
CHEK1-210ENST00000528276 LCE5AQ5TCM9 118 aa4.91□□□□□ -1.62
CHEK1-210ENST00000528276 KRTAP19-3Q7Z4W3 81 aa4.9□□□□□ -1.62
CHEK1-210ENST00000528276 SYNE2Q8WXH0 6885 aaKnown RBP4.89□□□□□ -1.63
CHEK1-210ENST00000528276 MT1GP13640 62 aa4.89□□□□□ -1.63
CHEK1-210ENST00000528276 MUC12Q9UKN1 5478 aa4.87□□□□□ -1.63
CHEK1-210ENST00000528276 KRTAP5-9P26371 169 aa4.82□□□□□ -1.64
CHEK1-210ENST00000528276 MT1MQ8N339 61 aa4.81□□□□□ -1.64
CHEK1-210ENST00000528276 KRTAP9-6A8MVA2 160 aa4.72□□□□□ -1.65
CHEK1-210ENST00000528276 KRTAP6-3Q3LI67 103 aa4.72□□□□□ -1.65
CHEK1-210ENST00000528276 KRTAP4-3Q9BYR4 195 aa4.72□□□□□ -1.65
CHEK1-210ENST00000528276 SPRR2EP22531 72 aa4.71□□□□□ -1.66
CHEK1-210ENST00000528276 SPRR2BP35325 72 aa4.71□□□□□ -1.66
CHEK1-210ENST00000528276 SPRR2AP35326 72 aa4.71□□□□□ -1.66
CHEK1-210ENST00000528276 LCE1AQ5T7P2 110 aa4.7□□□□□ -1.66
CHEK1-210ENST00000528276 MDN1Q9NU22 5596 aa4.7□□□□□ -1.66
CHEK1-210ENST00000528276 DSTQ03001 7570 aaKnown RBP4.57□□□□□ -1.68
CHEK1-210ENST00000528276 SPRR2DP22532 72 aa4.54□□□□□ -1.68
CHEK1-210ENST00000528276 INE1O15225 51 aa4.46□□□□□ -1.7
CHEK1-210ENST00000528276 KRTAP2-3P0C7H8 128 aa4.42□□□□□ -1.7
CHEK1-210ENST00000528276 KRTAP2-4Q9BYR9 128 aa4.42□□□□□ -1.7
CHEK1-210ENST00000528276 KRTAP2-1Q9BYU5 128 aa4.42□□□□□ -1.7
CHEK1-210ENST00000528276 NEBP20929 6669 aa4.36□□□□□ -1.71
CHEK1-210ENST00000528276 KRTAP5-5Q701N2 237 aaPredicted RBP4.28□□□□□ -1.72
CHEK1-210ENST00000528276 MT1AP04731 61 aa4.27□□□□□ -1.73
CHEK1-210ENST00000528276 KRTAP6-1Q3LI64 71 aa4.23□□□□□ -1.73
CHEK1-210ENST00000528276 KRTAP20-1Q3LI63 56 aa4.15□□□□□ -1.75
CHEK1-210ENST00000528276 SYNE1Q8NF91 8797 aaKnown RBP4.13□□□□□ -1.75
CHEK1-210ENST00000528276 KRTAP12-4P60329 112 aa4.06□□□□□ -1.76
CHEK1-210ENST00000528276 KRTAP2-2Q9BYT5 123 aa4.05□□□□□ -1.76
CHEK1-210ENST00000528276 KRTAP5-4Q6L8H1 288 aa4.03□□□□□ -1.76
CHEK1-210ENST00000528276 MT4P47944 62 aa3.95□□□□□ -1.78
CHEK1-210ENST00000528276 MT3P25713 68 aa3.93□□□□□ -1.78
CHEK1-210ENST00000528276 KRTAP6-2Q3LI66 62 aa3.91□□□□□ -1.78
CHEK1-210ENST00000528276 LCE3DQ9BYE3 92 aa3.85□□□□□ -1.79
CHEK1-210ENST00000528276 KRTAP20-2Q3LI61 65 aa3.81□□□□□ -1.8
CHEK1-210ENST00000528276 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.78□□□□□ -1.8
CHEK1-210ENST00000528276 HMCN1Q96RW7 5635 aa3.76□□□□□ -1.81
CHEK1-210ENST00000528276 LCE3EQ5T5B0 92 aa3.74□□□□□ -1.81
CHEK1-210ENST00000528276 LCE1FQ5T754 118 aa3.72□□□□□ -1.81
CHEK1-210ENST00000528276 KRTAP5-2Q701N4 177 aa3.67□□□□□ -1.82
CHEK1-210ENST00000528276 OBSCNQ5VST9 7968 aa3.62□□□□□ -1.83
CHEK1-210ENST00000528276 KRTAP5-11Q6L8G4 156 aa3.38□□□□□ -1.87
CHEK1-210ENST00000528276 LCE1EQ5T753 118 aa3.33□□□□□ -1.88
CHEK1-210ENST00000528276 PRM1P04553 51 aa3.31□□□□□ -1.88
CHEK1-210ENST00000528276 GPR98Q8WXG9 6306 aa3.3□□□□□ -1.88
CHEK1-210ENST00000528276 AHNAK2Q8IVF2 5795 aa3.25□□□□□ -1.89
CHEK1-210ENST00000528276 KRTAP5-10Q6L8G5 202 aa3.23□□□□□ -1.89
CHEK1-210ENST00000528276 LCE1BQ5T7P3 118 aa3.2□□□□□ -1.9
CHEK1-210ENST00000528276 KRTAP5-1Q6L8H4 278 aa3.16□□□□□ -1.9
CHEK1-210ENST00000528276 KRTAP5-8O75690 187 aa3.13□□□□□ -1.91
CHEK1-210ENST00000528276 LCE1CQ5T751 118 aa3.1□□□□□ -1.91
CHEK1-210ENST00000528276 KRTAP4-4Q9BYR3 166 aa3.1□□□□□ -1.91
CHEK1-210ENST00000528276 MUC5ACP98088 5654 aa3.1□□□□□ -1.91
CHEK1-210ENST00000528276 KRTAP5-7Q6L8G8 165 aa3.07□□□□□ -1.92
CHEK1-210ENST00000528276 KRTAP21-2Q3LI59 83 aa2.75□□□□□ -1.97
CHEK1-210ENST00000528276 MUC5BQ9HC84 5762 aaPredicted RBP2.7□□□□□ -1.98
CHEK1-210ENST00000528276 AHNAKQ09666 5890 aaKnown RBP2.59□□□□□ -2
CHEK1-210ENST00000528276 PHGR1C9JFL3 82 aa2.33□□□□□ -2.04
CHEK1-210ENST00000528276 MUC19Q7Z5P9 8384 aa2.16□□□□□ -2.06
CHEK1-210ENST00000528276 KRTAP21-1Q3LI58 79 aa2□□□□□ -2.09
CHEK1-210ENST00000528276 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 192.1 ms