RNA–Protein interactions for RNA: ENST00000528062.7

RBM39-243, Transcript of RNA binding motif protein 39, humanhuman

TSL 1 (best) BASIC

Gene RBM39, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-243ENST00000528062 KRTAP5-9P26371 169 aa4.73□□□□□ -1.65
RBM39-243ENST00000528062 LCE3CQ5T5A8 94 aa4.73□□□□□ -1.65
RBM39-243ENST00000528062 MUC12Q9UKN1 5478 aa4.73□□□□□ -1.65
RBM39-243ENST00000528062 LCE5AQ5TCM9 118 aa4.69□□□□□ -1.66
RBM39-243ENST00000528062 SPRR2FQ96RM1 72 aa4.65□□□□□ -1.66
RBM39-243ENST00000528062 KRTAP19-7Q3SYF9 63 aa4.65□□□□□ -1.67
RBM39-243ENST00000528062 MDN1Q9NU22 5596 aa4.65□□□□□ -1.67
RBM39-243ENST00000528062 KRTAP9-6A8MVA2 160 aa4.64□□□□□ -1.67
RBM39-243ENST00000528062 MT1EP04732 61 aa4.56□□□□□ -1.68
RBM39-243ENST00000528062 KRTAP4-7Q9BYR0 210 aa4.56□□□□□ -1.68
RBM39-243ENST00000528062 NEBP20929 6669 aa4.55□□□□□ -1.68
RBM39-243ENST00000528062 KRTAP9-4Q9BYQ2 154 aa4.54□□□□□ -1.68
RBM39-243ENST00000528062 LCE1AQ5T7P2 110 aa4.52□□□□□ -1.69
RBM39-243ENST00000528062 SPRR2EP22531 72 aa4.48□□□□□ -1.69
RBM39-243ENST00000528062 SPRR2BP35325 72 aa4.48□□□□□ -1.69
RBM39-243ENST00000528062 SPRR2AP35326 72 aa4.48□□□□□ -1.69
RBM39-243ENST00000528062 KRTAP2-3P0C7H8 128 aa4.46□□□□□ -1.7
RBM39-243ENST00000528062 KRTAP2-4Q9BYR9 128 aa4.46□□□□□ -1.7
RBM39-243ENST00000528062 KRTAP2-1Q9BYU5 128 aa4.46□□□□□ -1.7
RBM39-243ENST00000528062 MT1LQ93083 61 aa4.44□□□□□ -1.7
RBM39-243ENST00000528062 KRTAP19-4Q3LI73 84 aa4.42□□□□□ -1.7
RBM39-243ENST00000528062 KRTAP19-3Q7Z4W3 81 aa4.42□□□□□ -1.7
RBM39-243ENST00000528062 KRTAP9-9Q9BYP9 154 aa4.37□□□□□ -1.71
RBM39-243ENST00000528062 KRTAP2-2Q9BYT5 123 aa4.37□□□□□ -1.71
RBM39-243ENST00000528062 MT1GP13640 62 aa4.33□□□□□ -1.72
RBM39-243ENST00000528062 SPRR2DP22532 72 aa4.32□□□□□ -1.72
RBM39-243ENST00000528062 DSTQ03001 7570 aaKnown RBP4.31□□□□□ -1.72
RBM39-243ENST00000528062 LCE1FQ5T754 118 aa4.31□□□□□ -1.72
RBM39-243ENST00000528062 MT1MQ8N339 61 aa4.31□□□□□ -1.72
RBM39-243ENST00000528062 KRTAP4-3Q9BYR4 195 aa4.25□□□□□ -1.73
RBM39-243ENST00000528062 LOC100996750A0A140TA64 210 aa4.24□□□□□ -1.73
RBM39-243ENST00000528062 LCE4AQ5TA78 99 aa4.24□□□□□ -1.73
RBM39-243ENST00000528062 KRTAP20-1Q3LI63 56 aa4.2□□□□□ -1.74
RBM39-243ENST00000528062 LCE3BQ5TA77 95 aa4.18□□□□□ -1.74
RBM39-243ENST00000528062 KRTAP12-4P60329 112 aa3.96□□□□□ -1.78
RBM39-243ENST00000528062 KRTAP5-5Q701N2 237 aaPredicted RBP3.95□□□□□ -1.78
RBM39-243ENST00000528062 LCE1EQ5T753 118 aa3.92□□□□□ -1.78
RBM39-243ENST00000528062 KRTAP5-4Q6L8H1 288 aa3.89□□□□□ -1.79
RBM39-243ENST00000528062 KRTAP4-9Q9BYQ8 210 aa3.85□□□□□ -1.79
RBM39-243ENST00000528062 KRTAP6-1Q3LI64 71 aa3.79□□□□□ -1.8
RBM39-243ENST00000528062 LCE1DQ5T752 114 aa3.78□□□□□ -1.8
RBM39-243ENST00000528062 MT4P47944 62 aa3.78□□□□□ -1.81
RBM39-243ENST00000528062 SYNE1Q8NF91 8797 aaKnown RBP3.77□□□□□ -1.81
RBM39-243ENST00000528062 HMCN1Q96RW7 5635 aa3.76□□□□□ -1.81
RBM39-243ENST00000528062 KRTAP4-6Q9BYQ5 205 aa3.75□□□□□ -1.81
RBM39-243ENST00000528062 MT3P25713 68 aa3.75□□□□□ -1.81
RBM39-243ENST00000528062 MT1AP04731 61 aa3.74□□□□□ -1.81
RBM39-243ENST00000528062 LCE3EQ5T5B0 92 aa3.73□□□□□ -1.81
RBM39-243ENST00000528062 LCE3DQ9BYE3 92 aa3.65□□□□□ -1.83
RBM39-243ENST00000528062 KRTAP20-2Q3LI61 65 aa3.64□□□□□ -1.83
RBM39-243ENST00000528062 KRTAP5-3Q6L8H2 238 aa3.54□□□□□ -1.84
RBM39-243ENST00000528062 PRM1P04553 51 aa3.52□□□□□ -1.85
RBM39-243ENST00000528062 KRTAP5-2Q701N4 177 aa3.49□□□□□ -1.85
RBM39-243ENST00000528062 KRTAP6-2Q3LI66 62 aa3.48□□□□□ -1.85
RBM39-243ENST00000528062 AHNAK2Q8IVF2 5795 aa3.46□□□□□ -1.86
RBM39-243ENST00000528062 OBSCNQ5VST9 7968 aa3.36□□□□□ -1.87
RBM39-243ENST00000528062 GPR98Q8WXG9 6306 aa3.33□□□□□ -1.88
RBM39-243ENST00000528062 KRTAP5-10Q6L8G5 202 aa3.32□□□□□ -1.88
RBM39-243ENST00000528062 KRTAP4-12Q9BQ66 201 aa3.31□□□□□ -1.88
RBM39-243ENST00000528062 KRTAP4-11Q9BYQ6 195 aa3.21□□□□□ -1.9
RBM39-243ENST00000528062 KRTAP5-8O75690 187 aa3.13□□□□□ -1.91
RBM39-243ENST00000528062 KRTAP5-7Q6L8G8 165 aa3.11□□□□□ -1.91
RBM39-243ENST00000528062 KRTAP5-1Q6L8H4 278 aa3.07□□□□□ -1.92
RBM39-243ENST00000528062 MUC5ACP98088 5654 aa2.96□□□□□ -1.94
RBM39-243ENST00000528062 KRTAP4-2Q9BYR5 136 aa2.88□□□□□ -1.95
RBM39-243ENST00000528062 LCE1BQ5T7P3 118 aa2.82□□□□□ -1.96
RBM39-243ENST00000528062 LCE1CQ5T751 118 aa2.81□□□□□ -1.96
RBM39-243ENST00000528062 MUC5BQ9HC84 5762 aaPredicted RBP2.79□□□□□ -1.96
RBM39-243ENST00000528062 AHNAKQ09666 5890 aaKnown RBP2.67□□□□□ -1.98
RBM39-243ENST00000528062 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.62□□□□□ -1.99
RBM39-243ENST00000528062 KRTAP5-11Q6L8G4 156 aa2.52□□□□□ -2.01
RBM39-243ENST00000528062 MUC19Q7Z5P9 8384 aa2.51□□□□□ -2.01
RBM39-243ENST00000528062 KRTAP21-2Q3LI59 83 aa2.47□□□□□ -2.01
RBM39-243ENST00000528062 KRTAP4-4Q9BYR3 166 aa2.26□□□□□ -2.05
RBM39-243ENST00000528062 KRTAP21-1Q3LI58 79 aa2.22□□□□□ -2.05
RBM39-243ENST00000528062 PHGR1C9JFL3 82 aa2.18□□□□□ -2.06
RBM39-243ENST00000528062 MUC16Q8WXI7 14507 aa1.36□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 10.9 ms