RNA–Protein interactions for RNA: ENST00000527805.5

ATM-212, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 4,841 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-212ENST00000527805 KRTAP9-6A0A140TA67 174 aa5.07□□□□□ -1.6
ATM-212ENST00000527805 MT1LQ93083 61 aa5.06□□□□□ -1.6
ATM-212ENST00000527805 KRTAP4-7Q9BYR0 210 aa5.01□□□□□ -1.61
ATM-212ENST00000527805 USH2AO75445 5202 aa4.93□□□□□ -1.62
ATM-212ENST00000527805 KRTAP19-7Q3SYF9 63 aa4.92□□□□□ -1.62
ATM-212ENST00000527805 SPRR5A0A1B0GTR4 108 aa4.9□□□□□ -1.62
ATM-212ENST00000527805 MT1MQ8N339 61 aa4.89□□□□□ -1.63
ATM-212ENST00000527805 LCE3BQ5TA77 95 aa4.86□□□□□ -1.63
ATM-212ENST00000527805 KRTAP12-4P60329 112 aa4.84□□□□□ -1.63
ATM-212ENST00000527805 KRTAP4-3Q9BYR4 195 aa4.79□□□□□ -1.64
ATM-212ENST00000527805 SYNE1Q8NF91 8797 aaKnown RBP4.77□□□□□ -1.65
ATM-212ENST00000527805 KRTAP9-7A8MTY7 169 aa4.74□□□□□ -1.65
ATM-212ENST00000527805 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.73□□□□□ -1.65
ATM-212ENST00000527805 KRTAP6-3Q3LI67 103 aa4.7□□□□□ -1.66
ATM-212ENST00000527805 LOC100996750A0A140TA64 210 aa4.7□□□□□ -1.66
ATM-212ENST00000527805 SYNE2Q8WXH0 6885 aaKnown RBP4.67□□□□□ -1.66
ATM-212ENST00000527805 SSPOA2VEC9 5147 aa4.63□□□□□ -1.67
ATM-212ENST00000527805 FCGBPQ9Y6R7 5405 aaPredicted RBP4.61□□□□□ -1.67
ATM-212ENST00000527805 LCE1AQ5T7P2 110 aa4.58□□□□□ -1.68
ATM-212ENST00000527805 KMT2DO14686 5537 aa4.57□□□□□ -1.68
ATM-212ENST00000527805 MT4P47944 62 aa4.57□□□□□ -1.68
ATM-212ENST00000527805 MACF1Q9UPN3 7388 aaKnown RBP4.55□□□□□ -1.68
ATM-212ENST00000527805 LCE5AQ5TCM9 118 aa4.53□□□□□ -1.68
ATM-212ENST00000527805 DSTQ03001 7570 aaKnown RBP4.51□□□□□ -1.69
ATM-212ENST00000527805 LCE3DQ9BYE3 92 aa4.49□□□□□ -1.69
ATM-212ENST00000527805 KRTAP20-1Q3LI63 56 aa4.46□□□□□ -1.7
ATM-212ENST00000527805 MT1AP04731 61 aa4.42□□□□□ -1.7
ATM-212ENST00000527805 MT3P25713 68 aa4.42□□□□□ -1.7
ATM-212ENST00000527805 KRTAP9-6A8MVA2 160 aa4.39□□□□□ -1.71
ATM-212ENST00000527805 MUC12Q9UKN1 5478 aa4.39□□□□□ -1.71
ATM-212ENST00000527805 KRTAP2-3P0C7H8 128 aa4.39□□□□□ -1.71
ATM-212ENST00000527805 LCE3EQ5T5B0 92 aa4.39□□□□□ -1.71
ATM-212ENST00000527805 KRTAP2-4Q9BYR9 128 aa4.39□□□□□ -1.71
ATM-212ENST00000527805 OBSCNQ5VST9 7968 aa4.34□□□□□ -1.71
ATM-212ENST00000527805 KRTAP5-9P26371 169 aa4.31□□□□□ -1.72
ATM-212ENST00000527805 KRTAP2-2Q9BYT5 123 aa4.28□□□□□ -1.72
ATM-212ENST00000527805 KRTAP2-1Q9BYU5 128 aa4.28□□□□□ -1.72
ATM-212ENST00000527805 KRTAP6-1Q3LI64 71 aa4.26□□□□□ -1.73
ATM-212ENST00000527805 KRTAP4-9Q9BYQ8 210 aa4.22□□□□□ -1.73
ATM-212ENST00000527805 LCE4AQ5TA78 99 aa4.18□□□□□ -1.74
ATM-212ENST00000527805 MDN1Q9NU22 5596 aa4.12□□□□□ -1.75
ATM-212ENST00000527805 NEBP20929 6669 aa4.12□□□□□ -1.75
ATM-212ENST00000527805 KRTAP6-2Q3LI66 62 aa4.12□□□□□ -1.75
ATM-212ENST00000527805 LCE1DQ5T752 114 aa4.11□□□□□ -1.75
ATM-212ENST00000527805 KRTAP9-4Q9BYQ2 154 aa4.11□□□□□ -1.75
ATM-212ENST00000527805 LCE1BQ5T7P3 118 aa4.05□□□□□ -1.76
ATM-212ENST00000527805 PRM1P04553 51 aa3.96□□□□□ -1.78
ATM-212ENST00000527805 KRTAP4-6Q9BYQ5 205 aa3.83□□□□□ -1.8
ATM-212ENST00000527805 KRTAP20-2Q3LI61 65 aa3.73□□□□□ -1.81
ATM-212ENST00000527805 KRTAP5-5Q701N2 237 aaPredicted RBP3.59□□□□□ -1.83
ATM-212ENST00000527805 KRTAP5-4Q6L8H1 288 aa3.52□□□□□ -1.85
ATM-212ENST00000527805 GPR98Q8WXG9 6306 aa3.52□□□□□ -1.85
ATM-212ENST00000527805 KRTAP9-9Q9BYP9 154 aa3.43□□□□□ -1.86
ATM-212ENST00000527805 MUC19Q7Z5P9 8384 aa3.4□□□□□ -1.87
ATM-212ENST00000527805 KRTAP4-11Q9BYQ6 195 aa3.35□□□□□ -1.87
ATM-212ENST00000527805 LCE1CQ5T751 118 aa3.29□□□□□ -1.88
ATM-212ENST00000527805 LCE1EQ5T753 118 aa3.29□□□□□ -1.88
ATM-212ENST00000527805 LCE1FQ5T754 118 aa3.29□□□□□ -1.88
ATM-212ENST00000527805 HMCN1Q96RW7 5635 aa3.26□□□□□ -1.89
ATM-212ENST00000527805 KRTAP5-3Q6L8H2 238 aa3.21□□□□□ -1.9
ATM-212ENST00000527805 MUC5ACP98088 5654 aa3.21□□□□□ -1.9
ATM-212ENST00000527805 KRTAP5-2Q701N4 177 aa3.05□□□□□ -1.92
ATM-212ENST00000527805 KRTAP4-12Q9BQ66 201 aa3.03□□□□□ -1.92
ATM-212ENST00000527805 KRTAP4-2Q9BYR5 136 aa3.03□□□□□ -1.92
ATM-212ENST00000527805 AHNAK2Q8IVF2 5795 aa3.02□□□□□ -1.93
ATM-212ENST00000527805 KRTAP4-4Q9BYR3 166 aa2.94□□□□□ -1.94
ATM-212ENST00000527805 KRTAP5-8O75690 187 aa2.93□□□□□ -1.94
ATM-212ENST00000527805 KRTAP5-1Q6L8H4 278 aa2.7□□□□□ -1.98
ATM-212ENST00000527805 KRTAP5-10Q6L8G5 202 aa2.61□□□□□ -1.99
ATM-212ENST00000527805 AHNAKQ09666 5890 aaKnown RBP2.55□□□□□ -2
ATM-212ENST00000527805 MUC5BQ9HC84 5762 aaPredicted RBP2.53□□□□□ -2
ATM-212ENST00000527805 KRTAP5-11Q6L8G4 156 aa2.5□□□□□ -2.01
ATM-212ENST00000527805 KRTAP5-7Q6L8G8 165 aa2.44□□□□□ -2.02
ATM-212ENST00000527805 KRTAP21-2Q3LI59 83 aa2.41□□□□□ -2.02
ATM-212ENST00000527805 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.36□□□□□ -2.03
ATM-212ENST00000527805 PHGR1C9JFL3 82 aa2.25□□□□□ -2.05
ATM-212ENST00000527805 KRTAP21-1Q3LI58 79 aa1.81□□□□□ -2.12
ATM-212ENST00000527805 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 64.1 ms