RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 CDC42SE1Q9NRR8 79 aa4.2□□□□□ -1.74
NEDD8-205ENST00000527046 MUC12Q9UKN1 5478 aa4.19□□□□□ -1.74
NEDD8-205ENST00000527046 A6NED7 52 aa4.18□□□□□ -1.74
NEDD8-205ENST00000527046 KRTAP8-1Q8IUC2 63 aa4.17□□□□□ -1.74
NEDD8-205ENST00000527046 LCE5AQ5TCM9 118 aa4.11□□□□□ -1.75
NEDD8-205ENST00000527046 SPRR2FQ96RM1 72 aa4.11□□□□□ -1.75
NEDD8-205ENST00000527046 KRTAP4-11Q9BYQ6 195 aa4.11□□□□□ -1.75
NEDD8-205ENST00000527046 KRTAP19-7Q3SYF9 63 aa4.08□□□□□ -1.76
NEDD8-205ENST00000527046 LCE1AQ5T7P2 110 aa4.05□□□□□ -1.76
NEDD8-205ENST00000527046 TNP1P09430 55 aa4.03□□□□□ -1.76
NEDD8-205ENST00000527046 LCE3AQ5TA76 89 aa4.02□□□□□ -1.77
NEDD8-205ENST00000527046 MDN1Q9NU22 5596 aa4.01□□□□□ -1.77
NEDD8-205ENST00000527046 KRTAP19-5Q3LI72 72 aa4□□□□□ -1.77
NEDD8-205ENST00000527046 K7ERS5 55 aa3.99□□□□□ -1.77
NEDD8-205ENST00000527046 MT1EP04732 61 aa3.99□□□□□ -1.77
NEDD8-205ENST00000527046 SPRR2EP22531 72 aa3.98□□□□□ -1.77
NEDD8-205ENST00000527046 SPRR2BP35325 72 aa3.98□□□□□ -1.77
NEDD8-205ENST00000527046 SPRR2AP35326 72 aa3.98□□□□□ -1.77
NEDD8-205ENST00000527046 KRTAP2-3P0C7H8 128 aa3.95□□□□□ -1.78
NEDD8-205ENST00000527046 KRTAP25-1Q3LHN0 102 aa3.95□□□□□ -1.78
NEDD8-205ENST00000527046 KRTAP2-4Q9BYR9 128 aa3.95□□□□□ -1.78
NEDD8-205ENST00000527046 PRAC1Q96KF2 57 aa3.89□□□□□ -1.79
NEDD8-205ENST00000527046 ROMO1P60602 79 aa3.88□□□□□ -1.79
NEDD8-205ENST00000527046 KRTAP5-3Q6L8H2 238 aa3.88□□□□□ -1.79
NEDD8-205ENST00000527046 KRTAP19-3Q7Z4W3 81 aa3.88□□□□□ -1.79
NEDD8-205ENST00000527046 MT1LQ93083 61 aa3.87□□□□□ -1.79
NEDD8-205ENST00000527046 GPR98Q8WXG9 6306 aa3.86□□□□□ -1.79
NEDD8-205ENST00000527046 SPRR2DP22532 72 aa3.84□□□□□ -1.79
NEDD8-205ENST00000527046 KRTAP12-3P60328 96 aa3.83□□□□□ -1.8
NEDD8-205ENST00000527046 MT1GP13640 62 aa3.82□□□□□ -1.8
NEDD8-205ENST00000527046 MT1MQ8N339 61 aa3.78□□□□□ -1.8
NEDD8-205ENST00000527046 KRTAP2-2Q9BYT5 123 aa3.78□□□□□ -1.8
NEDD8-205ENST00000527046 KRTAP2-1Q9BYU5 128 aa3.78□□□□□ -1.8
NEDD8-205ENST00000527046 KRTAP4-3Q9BYR4 195 aa3.74□□□□□ -1.81
NEDD8-205ENST00000527046 PP632Q6XCG6 107 aa3.69□□□□□ -1.82
NEDD8-205ENST00000527046 DSTQ03001 7570 aaKnown RBP3.66□□□□□ -1.82
NEDD8-205ENST00000527046 LCE3CQ5T5A8 94 aa3.58□□□□□ -1.84
NEDD8-205ENST00000527046 LUZP6Q538Z0 58 aa3.51□□□□□ -1.85
NEDD8-205ENST00000527046 NDUFAF8A1L188 74 aa3.5□□□□□ -1.85
NEDD8-205ENST00000527046 KRTAP5-4Q6L8H1 288 aa3.5□□□□□ -1.85
NEDD8-205ENST00000527046 KRTAP5-5Q701N2 237 aaPredicted RBP3.49□□□□□ -1.85
NEDD8-205ENST00000527046 KRTAP9-6A8MVA2 160 aa3.47□□□□□ -1.85
NEDD8-205ENST00000527046 AHNAK2Q8IVF2 5795 aa3.4□□□□□ -1.87
NEDD8-205ENST00000527046 HMCN1Q96RW7 5635 aa3.39□□□□□ -1.87
NEDD8-205ENST00000527046 MT3P25713 68 aa3.38□□□□□ -1.87
NEDD8-205ENST00000527046 MT4P47944 62 aa3.36□□□□□ -1.87
NEDD8-205ENST00000527046 KRTAP5-10Q6L8G5 202 aa3.35□□□□□ -1.87
NEDD8-205ENST00000527046 MT1AP04731 61 aa3.27□□□□□ -1.89
NEDD8-205ENST00000527046 KRTAP6-1Q3LI64 71 aa3.27□□□□□ -1.89
NEDD8-205ENST00000527046 SYNE1Q8NF91 8797 aaKnown RBP3.27□□□□□ -1.89
NEDD8-205ENST00000527046 SPRR5A0A1B0GTR4 108 aa3.25□□□□□ -1.89
NEDD8-205ENST00000527046 KRTAP5-7Q6L8G8 165 aa3.25□□□□□ -1.89
NEDD8-205ENST00000527046 KRTAP20-2Q3LI61 65 aa3.24□□□□□ -1.89
NEDD8-205ENST00000527046 KRTAP12-4P60329 112 aa3.2□□□□□ -1.9
NEDD8-205ENST00000527046 KRTAP5-2Q701N4 177 aa3.11□□□□□ -1.91
NEDD8-205ENST00000527046 INE1O15225 51 aa3.06□□□□□ -1.92
NEDD8-205ENST00000527046 KRTAP6-2Q3LI66 62 aa3.05□□□□□ -1.92
NEDD8-205ENST00000527046 LCE1FQ5T754 118 aa3.01□□□□□ -1.93
NEDD8-205ENST00000527046 AHNAKQ09666 5890 aaKnown RBP2.91□□□□□ -1.94
NEDD8-205ENST00000527046 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.89□□□□□ -1.95
NEDD8-205ENST00000527046 MUC5ACP98088 5654 aa2.87□□□□□ -1.95
NEDD8-205ENST00000527046 MUC5BQ9HC84 5762 aaPredicted RBP2.86□□□□□ -1.95
NEDD8-205ENST00000527046 KRTAP5-8O75690 187 aa2.83□□□□□ -1.96
NEDD8-205ENST00000527046 OBSCNQ5VST9 7968 aa2.8□□□□□ -1.96
NEDD8-205ENST00000527046 LCE1EQ5T753 118 aa2.79□□□□□ -1.96
NEDD8-205ENST00000527046 KRTAP5-11Q6L8G4 156 aa2.75□□□□□ -1.97
NEDD8-205ENST00000527046 KRTAP5-1Q6L8H4 278 aa2.75□□□□□ -1.97
NEDD8-205ENST00000527046 LCE3DQ9BYE3 92 aa2.6□□□□□ -1.99
NEDD8-205ENST00000527046 LCE3EQ5T5B0 92 aa2.55□□□□□ -2
NEDD8-205ENST00000527046 LCE1CQ5T751 118 aa2.48□□□□□ -2.01
NEDD8-205ENST00000527046 LCE1BQ5T7P3 118 aa2.48□□□□□ -2.01
NEDD8-205ENST00000527046 KRTAP4-4Q9BYR3 166 aa2.38□□□□□ -2.03
NEDD8-205ENST00000527046 KRTAP21-2Q3LI59 83 aa2.18□□□□□ -2.06
NEDD8-205ENST00000527046 PRM1P04553 51 aa2.02□□□□□ -2.09
NEDD8-205ENST00000527046 PHGR1C9JFL3 82 aa1.97□□□□□ -2.09
NEDD8-205ENST00000527046 MUC19Q7Z5P9 8384 aa1.71□□□□□ -2.14
NEDD8-205ENST00000527046 KRTAP21-1Q3LI58 79 aa1.45□□□□□ -2.18
NEDD8-205ENST00000527046 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 260.8 ms