RNA–Protein interactions for RNA: ENST00000527025.5

CCDC90B-208, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 777 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-208ENST00000527025 KRTAP8-1Q8IUC2 63 aa3.53□□□□□ -1.84
CCDC90B-208ENST00000527025 KRTAP4-4Q9BYR3 166 aa3.53□□□□□ -1.84
CCDC90B-208ENST00000527025 V9GYY9 64 aa3.53□□□□□ -1.84
CCDC90B-208ENST00000527025 KRTAP5-4Q6L8H1 288 aa3.52□□□□□ -1.85
CCDC90B-208ENST00000527025 UQCR11O14957 56 aa3.5□□□□□ -1.85
CCDC90B-208ENST00000527025 PSPHP1O15172 72 aa3.5□□□□□ -1.85
CCDC90B-208ENST00000527025 SPINT4Q6UDR6 99 aa3.5□□□□□ -1.85
CCDC90B-208ENST00000527025 CAMK2N1Q7Z7J9 78 aa3.5□□□□□ -1.85
CCDC90B-208ENST00000527025 SPRR2EP22531 72 aa3.47□□□□□ -1.85
CCDC90B-208ENST00000527025 SPRR2BP35325 72 aa3.47□□□□□ -1.85
CCDC90B-208ENST00000527025 SPRR2AP35326 72 aa3.47□□□□□ -1.85
CCDC90B-208ENST00000527025 KRTAP20-1Q3LI63 56 aa3.46□□□□□ -1.86
CCDC90B-208ENST00000527025 MIR22HGQ0VDD5 57 aa3.45□□□□□ -1.86
CCDC90B-208ENST00000527025 KRTAP2-3P0C7H8 128 aa3.4□□□□□ -1.87
CCDC90B-208ENST00000527025 KRTAP2-4Q9BYR9 128 aa3.4□□□□□ -1.87
CCDC90B-208ENST00000527025 C10orf95Q9H7T3 257 aa3.39□□□□□ -1.87
CCDC90B-208ENST00000527025 A6NED7 52 aa3.38□□□□□ -1.87
CCDC90B-208ENST00000527025 KRTAP9-6A8MVA2 160 aa3.38□□□□□ -1.87
CCDC90B-208ENST00000527025 MT3P25713 68 aa3.37□□□□□ -1.87
CCDC90B-208ENST00000527025 KRTAP19-7Q3SYF9 63 aa3.36□□□□□ -1.87
CCDC90B-208ENST00000527025 SPRR2DP22532 72 aa3.35□□□□□ -1.87
CCDC90B-208ENST00000527025 PRAC1Q96KF2 57 aa3.35□□□□□ -1.87
CCDC90B-208ENST00000527025 MT1EP04732 61 aa3.3□□□□□ -1.88
CCDC90B-208ENST00000527025 CDC42SE1Q9NRR8 79 aa3.3□□□□□ -1.88
CCDC90B-208ENST00000527025 K7ERS5 55 aa3.29□□□□□ -1.88
CCDC90B-208ENST00000527025 KRTAP2-1Q9BYU5 128 aa3.29□□□□□ -1.88
CCDC90B-208ENST00000527025 TNP1P09430 55 aa3.28□□□□□ -1.88
CCDC90B-208ENST00000527025 KRTAP19-5Q3LI72 72 aa3.27□□□□□ -1.89
CCDC90B-208ENST00000527025 LCE3AQ5TA76 89 aa3.25□□□□□ -1.89
CCDC90B-208ENST00000527025 KRTAP19-3Q7Z4W3 81 aa3.24□□□□□ -1.89
CCDC90B-208ENST00000527025 DSTQ03001 7570 aaKnown RBP3.23□□□□□ -1.89
CCDC90B-208ENST00000527025 KRTAP25-1Q3LHN0 102 aa3.22□□□□□ -1.89
CCDC90B-208ENST00000527025 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
CCDC90B-208ENST00000527025 OBSCNQ5VST9 7968 aa3.16□□□□□ -1.9
CCDC90B-208ENST00000527025 MT1GP13640 62 aa3.16□□□□□ -1.9
CCDC90B-208ENST00000527025 ROMO1P60602 79 aa3.16□□□□□ -1.9
CCDC90B-208ENST00000527025 MT1LQ93083 61 aa3.16□□□□□ -1.9
CCDC90B-208ENST00000527025 MT1MQ8N339 61 aa3.14□□□□□ -1.91
CCDC90B-208ENST00000527025 BRK1Q8WUW1 75 aa3.13□□□□□ -1.91
CCDC90B-208ENST00000527025 KRTAP4-3Q9BYR4 195 aa3.13□□□□□ -1.91
CCDC90B-208ENST00000527025 KRTAP12-3P60328 96 aa3.11□□□□□ -1.91
CCDC90B-208ENST00000527025 PP632Q6XCG6 107 aa3.06□□□□□ -1.92
CCDC90B-208ENST00000527025 NDUFAF8A1L188 74 aa3.01□□□□□ -1.93
CCDC90B-208ENST00000527025 LCE3CQ5T5A8 94 aa3.01□□□□□ -1.93
CCDC90B-208ENST00000527025 KRTAP5-2Q701N4 177 aa2.97□□□□□ -1.93
CCDC90B-208ENST00000527025 MT4P47944 62 aa2.95□□□□□ -1.94
CCDC90B-208ENST00000527025 GPR98Q8WXG9 6306 aa2.95□□□□□ -1.94
CCDC90B-208ENST00000527025 PMAIP1Q13794 54 aa2.93□□□□□ -1.94
CCDC90B-208ENST00000527025 HMCN1Q96RW7 5635 aa2.93□□□□□ -1.94
CCDC90B-208ENST00000527025 PRO0628Q9UI54 55 aa2.92□□□□□ -1.94
CCDC90B-208ENST00000527025 KRTAP5-5Q701N2 237 aaPredicted RBP2.9□□□□□ -1.95
CCDC90B-208ENST00000527025 SYNE1Q8NF91 8797 aaKnown RBP2.82□□□□□ -1.96
CCDC90B-208ENST00000527025 AHNAK2Q8IVF2 5795 aa2.78□□□□□ -1.96
CCDC90B-208ENST00000527025 KRTAP20-2Q3LI61 65 aa2.78□□□□□ -1.96
CCDC90B-208ENST00000527025 LCE3EQ5T5B0 92 aa2.76□□□□□ -1.97
CCDC90B-208ENST00000527025 SPRR5A0A1B0GTR4 108 aa2.75□□□□□ -1.97
CCDC90B-208ENST00000527025 KRTAP5-10Q6L8G5 202 aa2.75□□□□□ -1.97
CCDC90B-208ENST00000527025 KTN1-AS1Q86SY8 53 aa2.75□□□□□ -1.97
CCDC90B-208ENST00000527025 KRTAP12-4P60329 112 aa2.71□□□□□ -1.98
CCDC90B-208ENST00000527025 KRTAP6-1Q3LI64 71 aa2.69□□□□□ -1.98
CCDC90B-208ENST00000527025 MT1AP04731 61 aa2.67□□□□□ -1.98
CCDC90B-208ENST00000527025 LUZP6Q538Z0 58 aa2.67□□□□□ -1.98
CCDC90B-208ENST00000527025 KRTAP5-7Q6L8G8 165 aa2.61□□□□□ -1.99
CCDC90B-208ENST00000527025 KRTAP6-2Q3LI66 62 aa2.55□□□□□ -2
CCDC90B-208ENST00000527025 LCE1CQ5T751 118 aa2.48□□□□□ -2.01
CCDC90B-208ENST00000527025 LCE1BQ5T7P3 118 aa2.48□□□□□ -2.01
CCDC90B-208ENST00000527025 KRTAP5-8O75690 187 aa2.46□□□□□ -2.02
CCDC90B-208ENST00000527025 MUC5ACP98088 5654 aa2.3□□□□□ -2.04
CCDC90B-208ENST00000527025 MUC5BQ9HC84 5762 aaPredicted RBP2.28□□□□□ -2.04
CCDC90B-208ENST00000527025 AHNAKQ09666 5890 aaKnown RBP2.26□□□□□ -2.05
CCDC90B-208ENST00000527025 LCE3DQ9BYE3 92 aa2.16□□□□□ -2.06
CCDC90B-208ENST00000527025 MUC19Q7Z5P9 8384 aa2.13□□□□□ -2.07
CCDC90B-208ENST00000527025 KRTAP21-2Q3LI59 83 aa1.83□□□□□ -2.12
CCDC90B-208ENST00000527025 INE1O15225 51 aa1.78□□□□□ -2.12
CCDC90B-208ENST00000527025 PRM1P04553 51 aa1.64□□□□□ -2.15
CCDC90B-208ENST00000527025 PHGR1C9JFL3 82 aa1.62□□□□□ -2.15
CCDC90B-208ENST00000527025 KRTAP21-1Q3LI58 79 aa1.16□□□□□ -2.22
CCDC90B-208ENST00000527025 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 169.2 ms