RNA–Protein interactions for RNA: ENST00000527011.5

VAV3-210, Transcript of vav guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best) BASIC

Gene VAV3, Length 4,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV3-210ENST00000527011 USH2AO75445 5202 aa5.34□□□□□ -1.55
VAV3-210ENST00000527011 LOC100996750A0A140TA64 210 aa5.34□□□□□ -1.55
VAV3-210ENST00000527011 MT1EP04732 61 aa5.31□□□□□ -1.56
VAV3-210ENST00000527011 KRTAP19-7Q3SYF9 63 aa5.29□□□□□ -1.56
VAV3-210ENST00000527011 SPRR2FQ96RM1 72 aa5.29□□□□□ -1.56
VAV3-210ENST00000527011 KRTAP4-3Q9BYR4 195 aa5.27□□□□□ -1.57
VAV3-210ENST00000527011 FCGBPQ9Y6R7 5405 aaPredicted RBP5.24□□□□□ -1.57
VAV3-210ENST00000527011 LCE3DQ9BYE3 92 aa5.21□□□□□ -1.58
VAV3-210ENST00000527011 DSTQ03001 7570 aaKnown RBP5.19□□□□□ -1.58
VAV3-210ENST00000527011 LCE3EQ5T5B0 92 aa5.15□□□□□ -1.59
VAV3-210ENST00000527011 KRTAP4-9Q9BYQ8 210 aa5.09□□□□□ -1.59
VAV3-210ENST00000527011 PRM1P04553 51 aa5.08□□□□□ -1.6
VAV3-210ENST00000527011 KRTAP19-3Q7Z4W3 81 aa5.07□□□□□ -1.6
VAV3-210ENST00000527011 MT1MQ8N339 61 aa5.03□□□□□ -1.6
VAV3-210ENST00000527011 MUC12Q9UKN1 5478 aa4.8□□□□□ -1.64
VAV3-210ENST00000527011 LCE2AQ5TA79 106 aaPredicted RBP4.8□□□□□ -1.64
VAV3-210ENST00000527011 SYNE2Q8WXH0 6885 aaKnown RBP4.79□□□□□ -1.64
VAV3-210ENST00000527011 KRTAP9-7A8MTY7 169 aa4.77□□□□□ -1.65
VAV3-210ENST00000527011 KRTAP9-2Q9BYQ4 174 aa4.68□□□□□ -1.66
VAV3-210ENST00000527011 KRTAP19-6Q3LI70 58 aa4.67□□□□□ -1.66
VAV3-210ENST00000527011 SPRR2EP22531 72 aa4.66□□□□□ -1.66
VAV3-210ENST00000527011 SPRR2BP35325 72 aa4.66□□□□□ -1.66
VAV3-210ENST00000527011 SPRR2AP35326 72 aa4.66□□□□□ -1.66
VAV3-210ENST00000527011 KRTAP6-1Q3LI64 71 aa4.64□□□□□ -1.67
VAV3-210ENST00000527011 LCE2DQ5TA82 110 aaPredicted RBP4.61□□□□□ -1.67
VAV3-210ENST00000527011 MT1AP04731 61 aa4.6□□□□□ -1.67
VAV3-210ENST00000527011 KRTAP6-2Q3LI66 62 aa4.58□□□□□ -1.68
VAV3-210ENST00000527011 SSPOA2VEC9 5147 aa4.56□□□□□ -1.68
VAV3-210ENST00000527011 MT3P25713 68 aa4.49□□□□□ -1.69
VAV3-210ENST00000527011 LCE5AQ5TCM9 118 aa4.47□□□□□ -1.69
VAV3-210ENST00000527011 SPRR2DP22532 72 aa4.44□□□□□ -1.7
VAV3-210ENST00000527011 KRTAP2-2Q9BYT5 123 aa4.27□□□□□ -1.73
VAV3-210ENST00000527011 MACF1Q9UPN3 7388 aaKnown RBP4.25□□□□□ -1.73
VAV3-210ENST00000527011 KRTAP9-6A0A140TA67 174 aa4.24□□□□□ -1.73
VAV3-210ENST00000527011 KRTAP9-4Q9BYQ2 154 aa4.23□□□□□ -1.73
VAV3-210ENST00000527011 KRTAP5-5Q701N2 237 aaPredicted RBP4.22□□□□□ -1.73
VAV3-210ENST00000527011 LCE1AQ5T7P2 110 aa4.18□□□□□ -1.74
VAV3-210ENST00000527011 LCE1DQ5T752 114 aa4.12□□□□□ -1.75
VAV3-210ENST00000527011 MT4P47944 62 aa4.11□□□□□ -1.75
VAV3-210ENST00000527011 LCE1BQ5T7P3 118 aa4.1□□□□□ -1.75
VAV3-210ENST00000527011 KRTAP6-3Q3LI67 103 aa4.07□□□□□ -1.76
VAV3-210ENST00000527011 MUC19Q7Z5P9 8384 aa4.06□□□□□ -1.76
VAV3-210ENST00000527011 MDN1Q9NU22 5596 aa4.05□□□□□ -1.76
VAV3-210ENST00000527011 LCE1EQ5T753 118 aa3.96□□□□□ -1.78
VAV3-210ENST00000527011 KRTAP4-11Q9BYQ6 195 aa3.83□□□□□ -1.8
VAV3-210ENST00000527011 KRTAP5-9P26371 169 aa3.64□□□□□ -1.83
VAV3-210ENST00000527011 KRTAP4-6Q9BYQ5 205 aa3.56□□□□□ -1.84
VAV3-210ENST00000527011 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.53□□□□□ -1.84
VAV3-210ENST00000527011 LCE4AQ5TA78 99 aa3.39□□□□□ -1.87
VAV3-210ENST00000527011 KRTAP20-2Q3LI61 65 aa3.35□□□□□ -1.87
VAV3-210ENST00000527011 MUC5ACP98088 5654 aa3.31□□□□□ -1.88
VAV3-210ENST00000527011 KRTAP20-1Q3LI63 56 aa3.27□□□□□ -1.89
VAV3-210ENST00000527011 KRTAP4-4Q9BYR3 166 aa3.24□□□□□ -1.89
VAV3-210ENST00000527011 NEBP20929 6669 aa3.2□□□□□ -1.9
VAV3-210ENST00000527011 KRTAP5-4Q6L8H1 288 aa3.16□□□□□ -1.9
VAV3-210ENST00000527011 HMCN1Q96RW7 5635 aa3.11□□□□□ -1.91
VAV3-210ENST00000527011 KRTAP5-10Q6L8G5 202 aa3.11□□□□□ -1.91
VAV3-210ENST00000527011 LCE1CQ5T751 118 aa3.05□□□□□ -1.92
VAV3-210ENST00000527011 LCE1FQ5T754 118 aa3.05□□□□□ -1.92
VAV3-210ENST00000527011 KRTAP4-12Q9BQ66 201 aa2.92□□□□□ -1.94
VAV3-210ENST00000527011 KRTAP4-2Q9BYR5 136 aa2.92□□□□□ -1.94
VAV3-210ENST00000527011 KRTAP5-2Q701N4 177 aa2.89□□□□□ -1.95
VAV3-210ENST00000527011 KRTAP5-3Q6L8H2 238 aa2.8□□□□□ -1.96
VAV3-210ENST00000527011 KRTAP5-1Q6L8H4 278 aa2.65□□□□□ -1.99
VAV3-210ENST00000527011 KRTAP21-1Q3LI58 79 aa2.63□□□□□ -1.99
VAV3-210ENST00000527011 GPR98Q8WXG9 6306 aa2.63□□□□□ -1.99
VAV3-210ENST00000527011 KRTAP21-2Q3LI59 83 aa2.63□□□□□ -1.99
VAV3-210ENST00000527011 KRTAP9-9Q9BYP9 154 aa2.59□□□□□ -1.99
VAV3-210ENST00000527011 AHNAK2Q8IVF2 5795 aa2.53□□□□□ -2
VAV3-210ENST00000527011 MUC5BQ9HC84 5762 aaPredicted RBP2.49□□□□□ -2.01
VAV3-210ENST00000527011 KRTAP5-8O75690 187 aa2.4□□□□□ -2.02
VAV3-210ENST00000527011 KRTAP5-11Q6L8G4 156 aa2.32□□□□□ -2.04
VAV3-210ENST00000527011 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.32□□□□□ -2.04
VAV3-210ENST00000527011 KRTAP5-7Q6L8G8 165 aa2.09□□□□□ -2.07
VAV3-210ENST00000527011 AHNAKQ09666 5890 aaKnown RBP2.08□□□□□ -2.08
VAV3-210ENST00000527011 PHGR1C9JFL3 82 aa2□□□□□ -2.09
VAV3-210ENST00000527011 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 78.6 ms