RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 SPRR2FQ96RM1 72 aa3.41□□□□□ -1.86
USP35-201ENST00000526425 MUC12Q9UKN1 5478 aa3.4□□□□□ -1.86
USP35-201ENST00000526425 KRTAP19-7Q3SYF9 63 aa3.4□□□□□ -1.87
USP35-201ENST00000526425 MT1EP04732 61 aa3.36□□□□□ -1.87
USP35-201ENST00000526425 KRTAP4-3Q9BYR4 195 aa3.35□□□□□ -1.87
USP35-201ENST00000526425 MT1LQ93083 61 aa3.35□□□□□ -1.87
USP35-201ENST00000526425 KRTAP9-6A0A140TA67 174 aa3.34□□□□□ -1.87
USP35-201ENST00000526425 MT1GP13640 62 aa3.32□□□□□ -1.88
USP35-201ENST00000526425 KRTAP9-6A8MVA2 160 aa3.32□□□□□ -1.88
USP35-201ENST00000526425 LOC100996750A0A140TA64 210 aa3.3□□□□□ -1.88
USP35-201ENST00000526425 KRTAP19-4Q3LI73 84 aa3.29□□□□□ -1.88
USP35-201ENST00000526425 MACF1Q9UPN3 7388 aaKnown RBP3.28□□□□□ -1.88
USP35-201ENST00000526425 KRTAP19-3Q7Z4W3 81 aa3.25□□□□□ -1.89
USP35-201ENST00000526425 SYNE2Q8WXH0 6885 aaKnown RBP3.22□□□□□ -1.89
USP35-201ENST00000526425 KRTAP2-3P0C7H8 128 aa3.2□□□□□ -1.9
USP35-201ENST00000526425 KRTAP2-4Q9BYR9 128 aa3.2□□□□□ -1.9
USP35-201ENST00000526425 KRTAP2-1Q9BYU5 128 aa3.2□□□□□ -1.9
USP35-201ENST00000526425 SPRR2EP22531 72 aa3.18□□□□□ -1.9
USP35-201ENST00000526425 SPRR2BP35325 72 aa3.18□□□□□ -1.9
USP35-201ENST00000526425 SPRR2AP35326 72 aa3.18□□□□□ -1.9
USP35-201ENST00000526425 MT1MQ8N339 61 aa3.18□□□□□ -1.9
USP35-201ENST00000526425 LCE1AQ5T7P2 110 aa3.15□□□□□ -1.9
USP35-201ENST00000526425 LCE1EQ5T753 118 aa3.13□□□□□ -1.91
USP35-201ENST00000526425 LCE3BQ5TA77 95 aa3.13□□□□□ -1.91
USP35-201ENST00000526425 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.11□□□□□ -1.91
USP35-201ENST00000526425 KRTAP9-7A8MTY7 169 aa3.1□□□□□ -1.91
USP35-201ENST00000526425 LCE5AQ5TCM9 118 aa3.1□□□□□ -1.91
USP35-201ENST00000526425 PRM1P04553 51 aa3.09□□□□□ -1.91
USP35-201ENST00000526425 KRTAP4-9Q9BYQ8 210 aa3.07□□□□□ -1.92
USP35-201ENST00000526425 MUC19Q7Z5P9 8384 aa3.07□□□□□ -1.92
USP35-201ENST00000526425 MDN1Q9NU22 5596 aa3.07□□□□□ -1.92
USP35-201ENST00000526425 SPRR2DP22532 72 aa3.06□□□□□ -1.92
USP35-201ENST00000526425 KRTAP5-9P26371 169 aa3.06□□□□□ -1.92
USP35-201ENST00000526425 KRTAP6-3Q3LI67 103 aa3.04□□□□□ -1.92
USP35-201ENST00000526425 KRTAP2-2Q9BYT5 123 aa2.95□□□□□ -1.94
USP35-201ENST00000526425 LCE1DQ5T752 114 aa2.92□□□□□ -1.94
USP35-201ENST00000526425 KRTAP6-1Q3LI64 71 aa2.89□□□□□ -1.95
USP35-201ENST00000526425 LCE3DQ9BYE3 92 aa2.85□□□□□ -1.95
USP35-201ENST00000526425 KRTAP20-1Q3LI63 56 aa2.83□□□□□ -1.96
USP35-201ENST00000526425 MT1AP04731 61 aa2.82□□□□□ -1.96
USP35-201ENST00000526425 LCE3EQ5T5B0 92 aa2.82□□□□□ -1.96
USP35-201ENST00000526425 NEBP20929 6669 aa2.78□□□□□ -1.96
USP35-201ENST00000526425 MT4P47944 62 aa2.76□□□□□ -1.97
USP35-201ENST00000526425 LCE1FQ5T754 118 aa2.73□□□□□ -1.97
USP35-201ENST00000526425 KRTAP6-2Q3LI66 62 aa2.7□□□□□ -1.98
USP35-201ENST00000526425 KRTAP5-5Q701N2 237 aaPredicted RBP2.69□□□□□ -1.98
USP35-201ENST00000526425 KRTAP9-4Q9BYQ2 154 aa2.65□□□□□ -1.98
USP35-201ENST00000526425 MT3P25713 68 aa2.64□□□□□ -1.99
USP35-201ENST00000526425 LCE4AQ5TA78 99 aa2.6□□□□□ -1.99
USP35-201ENST00000526425 KRTAP4-6Q9BYQ5 205 aa2.56□□□□□ -2
USP35-201ENST00000526425 KRTAP5-4Q6L8H1 288 aa2.53□□□□□ -2
USP35-201ENST00000526425 KRTAP20-2Q3LI61 65 aa2.48□□□□□ -2.01
USP35-201ENST00000526425 HMCN1Q96RW7 5635 aa2.44□□□□□ -2.02
USP35-201ENST00000526425 GPR98Q8WXG9 6306 aa2.43□□□□□ -2.02
USP35-201ENST00000526425 LCE1BQ5T7P3 118 aa2.41□□□□□ -2.02
USP35-201ENST00000526425 KRTAP4-11Q9BYQ6 195 aa2.37□□□□□ -2.03
USP35-201ENST00000526425 KRTAP5-2Q701N4 177 aa2.29□□□□□ -2.04
USP35-201ENST00000526425 KRTAP5-3Q6L8H2 238 aa2.28□□□□□ -2.05
USP35-201ENST00000526425 MUC5ACP98088 5654 aa2.22□□□□□ -2.05
USP35-201ENST00000526425 KRTAP9-9Q9BYP9 154 aa2.1□□□□□ -2.07
USP35-201ENST00000526425 AHNAK2Q8IVF2 5795 aa2.06□□□□□ -2.08
USP35-201ENST00000526425 LCE1CQ5T751 118 aa2.06□□□□□ -2.08
USP35-201ENST00000526425 KRTAP5-1Q6L8H4 278 aa2□□□□□ -2.09
USP35-201ENST00000526425 KRTAP5-8O75690 187 aa1.99□□□□□ -2.09
USP35-201ENST00000526425 KRTAP4-2Q9BYR5 136 aa1.97□□□□□ -2.09
USP35-201ENST00000526425 KRTAP4-4Q9BYR3 166 aa1.96□□□□□ -2.1
USP35-201ENST00000526425 KRTAP5-10Q6L8G5 202 aa1.93□□□□□ -2.1
USP35-201ENST00000526425 KRTAP4-12Q9BQ66 201 aa1.93□□□□□ -2.1
USP35-201ENST00000526425 MUC5BQ9HC84 5762 aaPredicted RBP1.89□□□□□ -2.11
USP35-201ENST00000526425 KRTAP5-7Q6L8G8 165 aa1.83□□□□□ -2.12
USP35-201ENST00000526425 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.78□□□□□ -2.12
USP35-201ENST00000526425 KRTAP21-2Q3LI59 83 aa1.76□□□□□ -2.13
USP35-201ENST00000526425 KRTAP5-11Q6L8G4 156 aa1.74□□□□□ -2.13
USP35-201ENST00000526425 KRTAP21-1Q3LI58 79 aa1.69□□□□□ -2.14
USP35-201ENST00000526425 AHNAKQ09666 5890 aaKnown RBP1.69□□□□□ -2.14
USP35-201ENST00000526425 PHGR1C9JFL3 82 aa1.49□□□□□ -2.17
USP35-201ENST00000526425 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 56.2 ms