RNA–Protein interactions for RNA: ENST00000526262.5

PPFIA1-206, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 4,537 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-206ENST00000526262 MT1LQ93083 61 aa3.03□□□□□ -1.92
PPFIA1-206ENST00000526262 KRTAP19-3Q7Z4W3 81 aa3.02□□□□□ -1.93
PPFIA1-206ENST00000526262 KRTAP19-7Q3SYF9 63 aa2.99□□□□□ -1.93
PPFIA1-206ENST00000526262 KRTAP4-7Q9BYR0 210 aa2.99□□□□□ -1.93
PPFIA1-206ENST00000526262 SPRR2DP22532 72 aa2.95□□□□□ -1.94
PPFIA1-206ENST00000526262 MT3P25713 68 aa2.95□□□□□ -1.94
PPFIA1-206ENST00000526262 MT1MQ8N339 61 aa2.91□□□□□ -1.94
PPFIA1-206ENST00000526262 KRTAP9-6A0A140TA67 174 aa2.9□□□□□ -1.94
PPFIA1-206ENST00000526262 KRTAP12-4P60329 112 aa2.87□□□□□ -1.95
PPFIA1-206ENST00000526262 SSPOA2VEC9 5147 aa2.85□□□□□ -1.95
PPFIA1-206ENST00000526262 KRTAP4-3Q9BYR4 195 aa2.85□□□□□ -1.95
PPFIA1-206ENST00000526262 SYNE1Q8NF91 8797 aaKnown RBP2.84□□□□□ -1.95
PPFIA1-206ENST00000526262 KMT2DO14686 5537 aa2.84□□□□□ -1.95
PPFIA1-206ENST00000526262 LCE3BQ5TA77 95 aa2.82□□□□□ -1.96
PPFIA1-206ENST00000526262 LCE4AQ5TA78 99 aa2.82□□□□□ -1.96
PPFIA1-206ENST00000526262 FCGBPQ9Y6R7 5405 aaPredicted RBP2.81□□□□□ -1.96
PPFIA1-206ENST00000526262 LOC100996750A0A140TA64 210 aa2.8□□□□□ -1.96
PPFIA1-206ENST00000526262 KRTAP9-4Q9BYQ2 154 aa2.79□□□□□ -1.96
PPFIA1-206ENST00000526262 LCE5AQ5TCM9 118 aa2.78□□□□□ -1.96
PPFIA1-206ENST00000526262 SYNE2Q8WXH0 6885 aaKnown RBP2.77□□□□□ -1.97
PPFIA1-206ENST00000526262 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.76□□□□□ -1.97
PPFIA1-206ENST00000526262 MACF1Q9UPN3 7388 aaKnown RBP2.76□□□□□ -1.97
PPFIA1-206ENST00000526262 KRTAP6-3Q3LI67 103 aa2.76□□□□□ -1.97
PPFIA1-206ENST00000526262 DSTQ03001 7570 aaKnown RBP2.75□□□□□ -1.97
PPFIA1-206ENST00000526262 LCE1AQ5T7P2 110 aa2.73□□□□□ -1.97
PPFIA1-206ENST00000526262 KRTAP9-7A8MTY7 169 aa2.72□□□□□ -1.97
PPFIA1-206ENST00000526262 KRTAP9-6A8MVA2 160 aa2.71□□□□□ -1.98
PPFIA1-206ENST00000526262 OBSCNQ5VST9 7968 aa2.69□□□□□ -1.98
PPFIA1-206ENST00000526262 MUC12Q9UKN1 5478 aa2.69□□□□□ -1.98
PPFIA1-206ENST00000526262 LCE1FQ5T754 118 aa2.64□□□□□ -1.99
PPFIA1-206ENST00000526262 MT1AP04731 61 aa2.63□□□□□ -1.99
PPFIA1-206ENST00000526262 LCE3DQ9BYE3 92 aa2.63□□□□□ -1.99
PPFIA1-206ENST00000526262 KRTAP5-9P26371 169 aa2.62□□□□□ -1.99
PPFIA1-206ENST00000526262 KRTAP2-3P0C7H8 128 aa2.62□□□□□ -1.99
PPFIA1-206ENST00000526262 KRTAP2-4Q9BYR9 128 aa2.62□□□□□ -1.99
PPFIA1-206ENST00000526262 KRTAP2-1Q9BYU5 128 aa2.62□□□□□ -1.99
PPFIA1-206ENST00000526262 MT4P47944 62 aa2.6□□□□□ -1.99
PPFIA1-206ENST00000526262 LCE3EQ5T5B0 92 aa2.6□□□□□ -1.99
PPFIA1-206ENST00000526262 KRTAP6-1Q3LI64 71 aa2.55□□□□□ -2
PPFIA1-206ENST00000526262 PRM1P04553 51 aa2.54□□□□□ -2
PPFIA1-206ENST00000526262 KRTAP20-1Q3LI63 56 aa2.52□□□□□ -2.01
PPFIA1-206ENST00000526262 MDN1Q9NU22 5596 aa2.49□□□□□ -2.01
PPFIA1-206ENST00000526262 KRTAP4-9Q9BYQ8 210 aa2.49□□□□□ -2.01
PPFIA1-206ENST00000526262 KRTAP2-2Q9BYT5 123 aa2.48□□□□□ -2.01
PPFIA1-206ENST00000526262 LCE1EQ5T753 118 aa2.46□□□□□ -2.02
PPFIA1-206ENST00000526262 KRTAP9-9Q9BYP9 154 aa2.46□□□□□ -2.02
PPFIA1-206ENST00000526262 KRTAP6-2Q3LI66 62 aa2.43□□□□□ -2.02
PPFIA1-206ENST00000526262 NEBP20929 6669 aa2.41□□□□□ -2.02
PPFIA1-206ENST00000526262 LCE1DQ5T752 114 aa2.34□□□□□ -2.04
PPFIA1-206ENST00000526262 LCE1BQ5T7P3 118 aa2.29□□□□□ -2.04
PPFIA1-206ENST00000526262 KRTAP4-6Q9BYQ5 205 aa2.27□□□□□ -2.05
PPFIA1-206ENST00000526262 KRTAP5-5Q701N2 237 aaPredicted RBP2.25□□□□□ -2.05
PPFIA1-206ENST00000526262 MUC19Q7Z5P9 8384 aa2.24□□□□□ -2.05
PPFIA1-206ENST00000526262 KRTAP20-2Q3LI61 65 aa2.22□□□□□ -2.05
PPFIA1-206ENST00000526262 KRTAP5-4Q6L8H1 288 aa2.13□□□□□ -2.07
PPFIA1-206ENST00000526262 KRTAP4-12Q9BQ66 201 aa2.05□□□□□ -2.08
PPFIA1-206ENST00000526262 GPR98Q8WXG9 6306 aa2.05□□□□□ -2.08
PPFIA1-206ENST00000526262 HMCN1Q96RW7 5635 aa1.98□□□□□ -2.09
PPFIA1-206ENST00000526262 KRTAP4-11Q9BYQ6 195 aa1.97□□□□□ -2.09
PPFIA1-206ENST00000526262 KRTAP5-2Q701N4 177 aa1.9□□□□□ -2.1
PPFIA1-206ENST00000526262 KRTAP5-3Q6L8H2 238 aa1.9□□□□□ -2.11
PPFIA1-206ENST00000526262 MUC5ACP98088 5654 aa1.89□□□□□ -2.11
PPFIA1-206ENST00000526262 LCE1CQ5T751 118 aa1.81□□□□□ -2.12
PPFIA1-206ENST00000526262 AHNAK2Q8IVF2 5795 aa1.77□□□□□ -2.13
PPFIA1-206ENST00000526262 KRTAP4-2Q9BYR5 136 aa1.74□□□□□ -2.13
PPFIA1-206ENST00000526262 KRTAP5-8O75690 187 aa1.73□□□□□ -2.13
PPFIA1-206ENST00000526262 KRTAP4-4Q9BYR3 166 aa1.68□□□□□ -2.14
PPFIA1-206ENST00000526262 KRTAP5-1Q6L8H4 278 aa1.67□□□□□ -2.14
PPFIA1-206ENST00000526262 KRTAP5-10Q6L8G5 202 aa1.61□□□□□ -2.15
PPFIA1-206ENST00000526262 KRTAP5-11Q6L8G4 156 aa1.53□□□□□ -2.16
PPFIA1-206ENST00000526262 KRTAP5-7Q6L8G8 165 aa1.5□□□□□ -2.17
PPFIA1-206ENST00000526262 KRTAP21-2Q3LI59 83 aa1.5□□□□□ -2.17
PPFIA1-206ENST00000526262 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.5□□□□□ -2.17
PPFIA1-206ENST00000526262 MUC5BQ9HC84 5762 aaPredicted RBP1.49□□□□□ -2.17
PPFIA1-206ENST00000526262 AHNAKQ09666 5890 aaKnown RBP1.45□□□□□ -2.18
PPFIA1-206ENST00000526262 PHGR1C9JFL3 82 aa1.29□□□□□ -2.2
PPFIA1-206ENST00000526262 KRTAP21-1Q3LI58 79 aa1.15□□□□□ -2.23
PPFIA1-206ENST00000526262 MUC16Q8WXI7 14507 aa0.84□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 10.1 ms