RNA–Protein interactions for RNA: ENST00000526215.5

PUM1-218, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 2

Gene PUM1, Length 586 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-218ENST00000526215 KRTAP9-6A8MVA2 160 aa3.35□□□□□ -1.87
PUM1-218ENST00000526215 SPINT4Q6UDR6 99 aa3.35□□□□□ -1.87
PUM1-218ENST00000526215 KRTAP2-1Q9BYU5 128 aa3.35□□□□□ -1.87
PUM1-218ENST00000526215 CRIPTQ9P021 101 aa3.33□□□□□ -1.88
PUM1-218ENST00000526215 MT2AP02795 61 aa3.29□□□□□ -1.88
PUM1-218ENST00000526215 KRTAP10-10P60014 251 aa3.27□□□□□ -1.89
PUM1-218ENST00000526215 MT1FP04733 61 aa3.26□□□□□ -1.89
PUM1-218ENST00000526215 MDN1Q9NU22 5596 aa3.26□□□□□ -1.89
PUM1-218ENST00000526215 KRTAP19-6Q3LI70 58 aa3.25□□□□□ -1.89
PUM1-218ENST00000526215 M0QZ58 72 aa3.24□□□□□ -1.89
PUM1-218ENST00000526215 S4R3F8 94 aa3.24□□□□□ -1.89
PUM1-218ENST00000526215 CAMK2N1Q7Z7J9 78 aa3.23□□□□□ -1.89
PUM1-218ENST00000526215 KRTAP13-4Q3LI77 160 aa3.21□□□□□ -1.9
PUM1-218ENST00000526215 KRTAP12-1P59990 96 aa3.18□□□□□ -1.9
PUM1-218ENST00000526215 LUZP6Q538Z0 58 aa3.17□□□□□ -1.9
PUM1-218ENST00000526215 KRTAP5-9P26371 169 aa3.15□□□□□ -1.91
PUM1-218ENST00000526215 PP632Q6XCG6 107 aa3.15□□□□□ -1.91
PUM1-218ENST00000526215 KRTAP12-2P59991 146 aa3.14□□□□□ -1.91
PUM1-218ENST00000526215 C10orf95Q9H7T3 257 aa3.14□□□□□ -1.91
PUM1-218ENST00000526215 A0A0D9SG42 100 aa3.12□□□□□ -1.91
PUM1-218ENST00000526215 SPRR5A0A1B0GTR4 108 aa3.12□□□□□ -1.91
PUM1-218ENST00000526215 AHNAK2Q8IVF2 5795 aa3.12□□□□□ -1.91
PUM1-218ENST00000526215 KRTAP5-1Q6L8H4 278 aa3.11□□□□□ -1.91
PUM1-218ENST00000526215 PLAC4Q8WY50 150 aa3.11□□□□□ -1.91
PUM1-218ENST00000526215 LCE3EQ5T5B0 92 aa3.09□□□□□ -1.91
PUM1-218ENST00000526215 KRTAP5-7Q6L8G8 165 aa3.06□□□□□ -1.92
PUM1-218ENST00000526215 KRTAP5-10Q6L8G5 202 aa3.05□□□□□ -1.92
PUM1-218ENST00000526215 DSTQ03001 7570 aaKnown RBP3.05□□□□□ -1.92
PUM1-218ENST00000526215 SPRR2EP22531 72 aa3.02□□□□□ -1.93
PUM1-218ENST00000526215 SPRR2BP35325 72 aa3.02□□□□□ -1.93
PUM1-218ENST00000526215 SPRR2AP35326 72 aa3.02□□□□□ -1.93
PUM1-218ENST00000526215 KRTAP5-4Q6L8H1 288 aa2.95□□□□□ -1.94
PUM1-218ENST00000526215 R4GN34 69 aa2.94□□□□□ -1.94
PUM1-218ENST00000526215 MT1BP07438 61 aa2.93□□□□□ -1.94
PUM1-218ENST00000526215 SPRR2DP22532 72 aa2.93□□□□□ -1.94
PUM1-218ENST00000526215 KRTAP4-4Q9BYR3 166 aa2.93□□□□□ -1.94
PUM1-218ENST00000526215 PRO2289Q9P1D8 64 aa2.93□□□□□ -1.94
PUM1-218ENST00000526215 KRTAP19-8Q3LI54 63 aa2.91□□□□□ -1.94
PUM1-218ENST00000526215 INE1O15225 51 aa2.9□□□□□ -1.95
PUM1-218ENST00000526215 HMCN1Q96RW7 5635 aa2.89□□□□□ -1.95
PUM1-218ENST00000526215 SPRR2GQ9BYE4 73 aa2.89□□□□□ -1.95
PUM1-218ENST00000526215 LCE3AQ5TA76 89 aa2.88□□□□□ -1.95
PUM1-218ENST00000526215 TNP1P09430 55 aa2.84□□□□□ -1.95
PUM1-218ENST00000526215 SPRR2FQ96RM1 72 aa2.84□□□□□ -1.95
PUM1-218ENST00000526215 AHNAKQ09666 5890 aaKnown RBP2.82□□□□□ -1.96
PUM1-218ENST00000526215 KRTAP8-1Q8IUC2 63 aa2.76□□□□□ -1.97
PUM1-218ENST00000526215 OBSCNQ5VST9 7968 aa2.71□□□□□ -1.97
PUM1-218ENST00000526215 MUC5BQ9HC84 5762 aaPredicted RBP2.71□□□□□ -1.98
PUM1-218ENST00000526215 MT1XP80297 61 aa2.69□□□□□ -1.98
PUM1-218ENST00000526215 KRTAP4-3Q9BYR4 195 aa2.68□□□□□ -1.98
PUM1-218ENST00000526215 MUC5ACP98088 5654 aa2.65□□□□□ -1.98
PUM1-218ENST00000526215 MT4P47944 62 aa2.64□□□□□ -1.99
PUM1-218ENST00000526215 KRTAP5-5Q701N2 237 aaPredicted RBP2.62□□□□□ -1.99
PUM1-218ENST00000526215 LCE3DQ9BYE3 92 aa2.54□□□□□ -2
PUM1-218ENST00000526215 LCE1CQ5T751 118 aa2.5□□□□□ -2.01
PUM1-218ENST00000526215 LCE1BQ5T7P3 118 aa2.5□□□□□ -2.01
PUM1-218ENST00000526215 KRTAP12-3P60328 96 aa2.46□□□□□ -2.02
PUM1-218ENST00000526215 KRTAP19-3Q7Z4W3 81 aa2.44□□□□□ -2.02
PUM1-218ENST00000526215 KRTAP19-7Q3SYF9 63 aa2.41□□□□□ -2.02
PUM1-218ENST00000526215 MT1EP04732 61 aa2.4□□□□□ -2.03
PUM1-218ENST00000526215 MT1GP13640 62 aa2.38□□□□□ -2.03
PUM1-218ENST00000526215 KRTAP5-2Q701N4 177 aa2.36□□□□□ -2.03
PUM1-218ENST00000526215 KRTAP5-8O75690 187 aa2.33□□□□□ -2.04
PUM1-218ENST00000526215 MT1MQ8N339 61 aa2.3□□□□□ -2.04
PUM1-218ENST00000526215 KRTAP19-5Q3LI72 72 aa2.28□□□□□ -2.04
PUM1-218ENST00000526215 KRTAP20-2Q3LI61 65 aa2.25□□□□□ -2.05
PUM1-218ENST00000526215 MT1LQ93083 61 aa2.25□□□□□ -2.05
PUM1-218ENST00000526215 KRTAP12-4P60329 112 aa2.18□□□□□ -2.06
PUM1-218ENST00000526215 SYNE1Q8NF91 8797 aaKnown RBP2.13□□□□□ -2.07
PUM1-218ENST00000526215 MT1AP04731 61 aa2.01□□□□□ -2.09
PUM1-218ENST00000526215 MUC19Q7Z5P9 8384 aa1.97□□□□□ -2.09
PUM1-218ENST00000526215 KRTAP6-1Q3LI64 71 aa1.91□□□□□ -2.1
PUM1-218ENST00000526215 KRTAP6-2Q3LI66 62 aa1.88□□□□□ -2.11
PUM1-218ENST00000526215 PHGR1C9JFL3 82 aa1.82□□□□□ -2.12
PUM1-218ENST00000526215 PRM1P04553 51 aa1.78□□□□□ -2.12
PUM1-218ENST00000526215 KRTAP21-2Q3LI59 83 aa1.75□□□□□ -2.13
PUM1-218ENST00000526215 KRTAP21-1Q3LI58 79 aa1.4□□□□□ -2.19
PUM1-218ENST00000526215 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 84.3 ms