RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 PLAC4Q8WY50 150 aa2.16□□□□□ -2.06
SVIP-202ENST00000525670 A0A0D9SG42 100 aa2.15□□□□□ -2.07
SVIP-202ENST00000525670 MT1XP80297 61 aa2.14□□□□□ -2.07
SVIP-202ENST00000525670 SPATA8Q6RVD6 105 aa2.12□□□□□ -2.07
SVIP-202ENST00000525670 MUC12Q9UKN1 5478 aa2.12□□□□□ -2.07
SVIP-202ENST00000525670 SEC61GP60059 68 aa2.11□□□□□ -2.07
SVIP-202ENST00000525670 PRO2289Q9P1D8 64 aa2.11□□□□□ -2.07
SVIP-202ENST00000525670 SERP1Q9Y6X1 66 aa2.11□□□□□ -2.07
SVIP-202ENST00000525670 NEBP20929 6669 aa2.1□□□□□ -2.07
SVIP-202ENST00000525670 MDN1Q9NU22 5596 aa2.09□□□□□ -2.08
SVIP-202ENST00000525670 A0A1B0GU69 56 aa2.08□□□□□ -2.08
SVIP-202ENST00000525670 KRTAP6-3Q3LI67 103 aa2.08□□□□□ -2.08
SVIP-202ENST00000525670 SPINT4Q6UDR6 99 aa2.08□□□□□ -2.08
SVIP-202ENST00000525670 CAMK2N1Q7Z7J9 78 aa2.08□□□□□ -2.08
SVIP-202ENST00000525670 A0A1B0GU33 70 aa2.07□□□□□ -2.08
SVIP-202ENST00000525670 ATP5EP56381 51 aaPredicted RBP2.07□□□□□ -2.08
SVIP-202ENST00000525670 TMEM258P61165 79 aa2.06□□□□□ -2.08
SVIP-202ENST00000525670 SPRR2FQ96RM1 72 aa2.06□□□□□ -2.08
SVIP-202ENST00000525670 KRTAP8-1Q8IUC2 63 aa2.05□□□□□ -2.08
SVIP-202ENST00000525670 PRR15LQ9BU68 103 aa2.03□□□□□ -2.08
SVIP-202ENST00000525670 KRTAP12-1P59990 96 aa2.02□□□□□ -2.09
SVIP-202ENST00000525670 SPRR2EP22531 72 aa2.01□□□□□ -2.09
SVIP-202ENST00000525670 SPRR2BP35325 72 aa2.01□□□□□ -2.09
SVIP-202ENST00000525670 SPRR2AP35326 72 aa2.01□□□□□ -2.09
SVIP-202ENST00000525670 SMIM26A0A096LP01 95 aa2□□□□□ -2.09
SVIP-202ENST00000525670 PSPHP1O15172 72 aa1.99□□□□□ -2.09
SVIP-202ENST00000525670 KRTAP21-2Q3LI59 83 aa1.99□□□□□ -2.09
SVIP-202ENST00000525670 LINC01558Q9Y6Z2 57 aa1.99□□□□□ -2.09
SVIP-202ENST00000525670 KRTAP20-1Q3LI63 56 aa1.95□□□□□ -2.1
SVIP-202ENST00000525670 UQCR11O14957 56 aa1.94□□□□□ -2.1
SVIP-202ENST00000525670 SPRR2DP22532 72 aa1.94□□□□□ -2.1
SVIP-202ENST00000525670 MIR22HGQ0VDD5 57 aa1.93□□□□□ -2.1
SVIP-202ENST00000525670 C10orf95Q9H7T3 257 aa1.93□□□□□ -2.1
SVIP-202ENST00000525670 A6NED7 52 aa1.91□□□□□ -2.1
SVIP-202ENST00000525670 KRTAP19-5Q3LI72 72 aa1.91□□□□□ -2.1
SVIP-202ENST00000525670 MT1EP04732 61 aa1.9□□□□□ -2.11
SVIP-202ENST00000525670 KRTAP19-7Q3SYF9 63 aa1.9□□□□□ -2.11
SVIP-202ENST00000525670 TNP1P09430 55 aa1.89□□□□□ -2.11
SVIP-202ENST00000525670 Q1T7F1 81 aa1.89□□□□□ -2.11
SVIP-202ENST00000525670 V9GYY9 64 aa1.89□□□□□ -2.11
SVIP-202ENST00000525670 K7ERS5 55 aa1.86□□□□□ -2.11
SVIP-202ENST00000525670 KRTAP2-3P0C7H8 128 aa1.86□□□□□ -2.11
SVIP-202ENST00000525670 KRTAP2-4Q9BYR9 128 aa1.86□□□□□ -2.11
SVIP-202ENST00000525670 KRTAP19-3Q7Z4W3 81 aa1.85□□□□□ -2.11
SVIP-202ENST00000525670 KRTAP12-4P60329 112 aa1.83□□□□□ -2.12
SVIP-202ENST00000525670 MT1LQ93083 61 aa1.82□□□□□ -2.12
SVIP-202ENST00000525670 KRTAP2-1Q9BYU5 128 aa1.81□□□□□ -2.12
SVIP-202ENST00000525670 DSTQ03001 7570 aaKnown RBP1.81□□□□□ -2.12
SVIP-202ENST00000525670 KRTAP12-3P60328 96 aa1.8□□□□□ -2.12
SVIP-202ENST00000525670 RPS28P62857 69 aaKnown RBP1.8□□□□□ -2.12
SVIP-202ENST00000525670 MT1MQ8N339 61 aa1.8□□□□□ -2.12
SVIP-202ENST00000525670 KRTAP25-1Q3LHN0 102 aa1.79□□□□□ -2.12
SVIP-202ENST00000525670 CDC42SE1Q9NRR8 79 aa1.79□□□□□ -2.12
SVIP-202ENST00000525670 MT1GP13640 62 aa1.77□□□□□ -2.13
SVIP-202ENST00000525670 ROMO1P60602 79 aa1.76□□□□□ -2.13
SVIP-202ENST00000525670 BRK1Q8WUW1 75 aa1.74□□□□□ -2.13
SVIP-202ENST00000525670 MT4P47944 62 aa1.72□□□□□ -2.13
SVIP-202ENST00000525670 HMCN1Q96RW7 5635 aa1.7□□□□□ -2.14
SVIP-202ENST00000525670 GPR98Q8WXG9 6306 aa1.66□□□□□ -2.14
SVIP-202ENST00000525670 AHNAK2Q8IVF2 5795 aa1.64□□□□□ -2.15
SVIP-202ENST00000525670 SYNE1Q8NF91 8797 aaKnown RBP1.61□□□□□ -2.15
SVIP-202ENST00000525670 PMAIP1Q13794 54 aa1.59□□□□□ -2.15
SVIP-202ENST00000525670 KRTAP20-2Q3LI61 65 aa1.57□□□□□ -2.16
SVIP-202ENST00000525670 KRTAP6-1Q3LI64 71 aa1.56□□□□□ -2.16
SVIP-202ENST00000525670 MT1AP04731 61 aa1.53□□□□□ -2.16
SVIP-202ENST00000525670 KRTAP5-10Q6L8G5 202 aa1.5□□□□□ -2.17
SVIP-202ENST00000525670 PRO0628Q9UI54 55 aa1.49□□□□□ -2.17
SVIP-202ENST00000525670 KRTAP6-2Q3LI66 62 aa1.48□□□□□ -2.17
SVIP-202ENST00000525670 KTN1-AS1Q86SY8 53 aa1.45□□□□□ -2.18
SVIP-202ENST00000525670 MUC5ACP98088 5654 aa1.34□□□□□ -2.19
SVIP-202ENST00000525670 MUC5BQ9HC84 5762 aaPredicted RBP1.33□□□□□ -2.2
SVIP-202ENST00000525670 AHNAKQ09666 5890 aaKnown RBP1.32□□□□□ -2.2
SVIP-202ENST00000525670 LUZP6Q538Z0 58 aa1.26□□□□□ -2.21
SVIP-202ENST00000525670 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
SVIP-202ENST00000525670 PRM1P04553 51 aa0.95□□□□□ -2.26
SVIP-202ENST00000525670 PHGR1C9JFL3 82 aa0.91□□□□□ -2.26
SVIP-202ENST00000525670 INE1O15225 51 aa0.81□□□□□ -2.28
SVIP-202ENST00000525670 KRTAP21-1Q3LI58 79 aa0.64□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 509.6 ms