RNA–Protein interactions for RNA: ENST00000525598.1

C2CD2L-202, Transcript of C2CD2 like, humanhuman

TSL 1 (best)

Gene C2CD2L, Length 5,931 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD2L-202ENST00000525598 SYNE1Q8NF91 8797 aaKnown RBP3.58□□□□□ -1.84
C2CD2L-202ENST00000525598 MT1MQ8N339 61 aa3.56□□□□□ -1.84
C2CD2L-202ENST00000525598 KMT2CQ8NEZ4 4911 aaKnown RBP3.51□□□□□ -1.85
C2CD2L-202ENST00000525598 HYDINQ4G0P3 5121 aa3.51□□□□□ -1.85
C2CD2L-202ENST00000525598 LCE2AQ5TA79 106 aaPredicted RBP3.49□□□□□ -1.85
C2CD2L-202ENST00000525598 LCE5AQ5TCM9 118 aa3.48□□□□□ -1.85
C2CD2L-202ENST00000525598 FLGP20930 4061 aaPredicted RBP3.45□□□□□ -1.86
C2CD2L-202ENST00000525598 MT1AP04731 61 aa3.44□□□□□ -1.86
C2CD2L-202ENST00000525598 LOC100996750A0A140TA64 210 aa3.44□□□□□ -1.86
C2CD2L-202ENST00000525598 TNXBP22105 4242 aa3.4□□□□□ -1.87
C2CD2L-202ENST00000525598 LCE1AQ5T7P2 110 aa3.37□□□□□ -1.87
C2CD2L-202ENST00000525598 KRTAP6-2Q3LI66 62 aa3.33□□□□□ -1.88
C2CD2L-202ENST00000525598 LCE1CQ5T751 118 aa3.33□□□□□ -1.88
C2CD2L-202ENST00000525598 LCE1EQ5T753 118 aa3.33□□□□□ -1.88
C2CD2L-202ENST00000525598 LCE1FQ5T754 118 aa3.33□□□□□ -1.88
C2CD2L-202ENST00000525598 ABCA13Q86UQ4 5058 aa3.33□□□□□ -1.88
C2CD2L-202ENST00000525598 KRTAP4-9Q9BYQ8 210 aa3.33□□□□□ -1.88
C2CD2L-202ENST00000525598 KRTAP4-3Q9BYR4 195 aa3.32□□□□□ -1.88
C2CD2L-202ENST00000525598 LPAP08519 4548 aa3.32□□□□□ -1.88
C2CD2L-202ENST00000525598 KRTAP9-6A0A140TA67 174 aa3.31□□□□□ -1.88
C2CD2L-202ENST00000525598 KRTAP9-2Q9BYQ4 174 aa3.31□□□□□ -1.88
C2CD2L-202ENST00000525598 KRTAP19-7Q3SYF9 63 aa3.3□□□□□ -1.88
C2CD2L-202ENST00000525598 LCE4AQ5TA78 99 aa3.29□□□□□ -1.88
C2CD2L-202ENST00000525598 KRTAP6-3Q3LI67 103 aa3.23□□□□□ -1.89
C2CD2L-202ENST00000525598 EPPK1P58107 5090 aaKnown RBP3.22□□□□□ -1.89
C2CD2L-202ENST00000525598 KRTAP20-1Q3LI63 56 aa3.21□□□□□ -1.9
C2CD2L-202ENST00000525598 RNF213Q63HN8 5207 aa3.21□□□□□ -1.9
C2CD2L-202ENST00000525598 UBR4Q5T4S7 5183 aa3.21□□□□□ -1.9
C2CD2L-202ENST00000525598 OBSCNQ5VST9 7968 aa3.18□□□□□ -1.9
C2CD2L-202ENST00000525598 KRTAP9-7A8MTY7 169 aa3.17□□□□□ -1.9
C2CD2L-202ENST00000525598 KRTAP9-6A8MVA2 160 aa3.15□□□□□ -1.9
C2CD2L-202ENST00000525598 KRTAP2-2Q9BYT5 123 aa3.13□□□□□ -1.91
C2CD2L-202ENST00000525598 FAT4Q6V0I7 4981 aa3.12□□□□□ -1.91
C2CD2L-202ENST00000525598 MUC2Q02817 5179 aa3.1□□□□□ -1.91
C2CD2L-202ENST00000525598 KRTAP6-1Q3LI64 71 aa3.1□□□□□ -1.91
C2CD2L-202ENST00000525598 KRTAP9-4Q9BYQ2 154 aa3.1□□□□□ -1.91
C2CD2L-202ENST00000525598 HMCN2Q8NDA2 5059 aa3.06□□□□□ -1.92
C2CD2L-202ENST00000525598 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.92□□□□□ -1.94
C2CD2L-202ENST00000525598 SYNE2Q8WXH0 6885 aaKnown RBP2.92□□□□□ -1.94
C2CD2L-202ENST00000525598 FCGBPQ9Y6R7 5405 aaPredicted RBP2.88□□□□□ -1.95
C2CD2L-202ENST00000525598 FSIP2Q5CZC0 6907 aa2.86□□□□□ -1.95
C2CD2L-202ENST00000525598 KRTAP5-9P26371 169 aa2.85□□□□□ -1.95
C2CD2L-202ENST00000525598 DSTQ03001 7570 aaKnown RBP2.85□□□□□ -1.95
C2CD2L-202ENST00000525598 KRTAP4-11Q9BYQ6 195 aa2.8□□□□□ -1.96
C2CD2L-202ENST00000525598 KRTAP20-2Q3LI61 65 aa2.74□□□□□ -1.97
C2CD2L-202ENST00000525598 USH2AO75445 5202 aa2.73□□□□□ -1.97
C2CD2L-202ENST00000525598 MUC19Q7Z5P9 8384 aa2.72□□□□□ -1.97
C2CD2L-202ENST00000525598 KRTAP9-9Q9BYP9 154 aa2.7□□□□□ -1.98
C2CD2L-202ENST00000525598 KMT2DO14686 5537 aa2.64□□□□□ -1.99
C2CD2L-202ENST00000525598 MUC12Q9UKN1 5478 aa2.64□□□□□ -1.99
C2CD2L-202ENST00000525598 SSPOA2VEC9 5147 aa2.56□□□□□ -2
C2CD2L-202ENST00000525598 KRTAP4-4Q9BYR3 166 aa2.55□□□□□ -2
C2CD2L-202ENST00000525598 NEBP20929 6669 aa2.52□□□□□ -2.01
C2CD2L-202ENST00000525598 KRTAP5-4Q6L8H1 288 aa2.48□□□□□ -2.01
C2CD2L-202ENST00000525598 KRTAP5-5Q701N2 237 aaPredicted RBP2.47□□□□□ -2.01
C2CD2L-202ENST00000525598 KRTAP4-12Q9BQ66 201 aa2.44□□□□□ -2.02
C2CD2L-202ENST00000525598 KRTAP4-2Q9BYR5 136 aa2.44□□□□□ -2.02
C2CD2L-202ENST00000525598 KRTAP4-6Q9BYQ5 205 aa2.42□□□□□ -2.02
C2CD2L-202ENST00000525598 MACF1Q9UPN3 7388 aaKnown RBP2.36□□□□□ -2.03
C2CD2L-202ENST00000525598 MDN1Q9NU22 5596 aa2.26□□□□□ -2.05
C2CD2L-202ENST00000525598 GPR98Q8WXG9 6306 aa2.2□□□□□ -2.06
C2CD2L-202ENST00000525598 KRTAP5-3Q6L8H2 238 aa2.16□□□□□ -2.06
C2CD2L-202ENST00000525598 AHNAK2Q8IVF2 5795 aa2.04□□□□□ -2.08
C2CD2L-202ENST00000525598 KRTAP5-2Q701N4 177 aa2.04□□□□□ -2.08
C2CD2L-202ENST00000525598 MUC5ACP98088 5654 aa1.97□□□□□ -2.09
C2CD2L-202ENST00000525598 HMCN1Q96RW7 5635 aa1.93□□□□□ -2.1
C2CD2L-202ENST00000525598 KRTAP5-10Q6L8G5 202 aa1.92□□□□□ -2.1
C2CD2L-202ENST00000525598 KRTAP5-8O75690 187 aa1.89□□□□□ -2.11
C2CD2L-202ENST00000525598 KRTAP5-11Q6L8G4 156 aa1.81□□□□□ -2.12
C2CD2L-202ENST00000525598 PHGR1C9JFL3 82 aa1.8□□□□□ -2.12
C2CD2L-202ENST00000525598 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.75□□□□□ -2.13
C2CD2L-202ENST00000525598 KRTAP21-1Q3LI58 79 aa1.7□□□□□ -2.14
C2CD2L-202ENST00000525598 MUC5BQ9HC84 5762 aaPredicted RBP1.69□□□□□ -2.14
C2CD2L-202ENST00000525598 KRTAP5-1Q6L8H4 278 aa1.67□□□□□ -2.14
C2CD2L-202ENST00000525598 AHNAKQ09666 5890 aaKnown RBP1.66□□□□□ -2.14
C2CD2L-202ENST00000525598 KRTAP5-7Q6L8G8 165 aa1.62□□□□□ -2.15
C2CD2L-202ENST00000525598 KRTAP21-2Q3LI59 83 aa1.58□□□□□ -2.16
C2CD2L-202ENST00000525598 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 9.2 ms