RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 KRTAP2-3P0C7H8 128 aa2.6□□□□□ -1.99
CD44-214ENST00000525211 KRTAP2-4Q9BYR9 128 aa2.6□□□□□ -1.99
CD44-214ENST00000525211 UQCR11O14957 56 aa2.58□□□□□ -2
CD44-214ENST00000525211 PRO2289Q9P1D8 64 aa2.58□□□□□ -2
CD44-214ENST00000525211 V9GYY9 64 aa2.58□□□□□ -2
CD44-214ENST00000525211 MDN1Q9NU22 5596 aa2.58□□□□□ -2
CD44-214ENST00000525211 MIR22HGQ0VDD5 57 aa2.57□□□□□ -2
CD44-214ENST00000525211 LCE3CQ5T5A8 94 aa2.57□□□□□ -2
CD44-214ENST00000525211 CAMK2N1Q7Z7J9 78 aa2.57□□□□□ -2
CD44-214ENST00000525211 C10orf95Q9H7T3 257 aa2.57□□□□□ -2
CD44-214ENST00000525211 A6NED7 52 aa2.52□□□□□ -2.01
CD44-214ENST00000525211 KRTAP5-9P26371 169 aa2.5□□□□□ -2.01
CD44-214ENST00000525211 LCE1EQ5T753 118 aa2.5□□□□□ -2.01
CD44-214ENST00000525211 KRTAP8-1Q8IUC2 63 aa2.48□□□□□ -2.01
CD44-214ENST00000525211 KRTAP2-1Q9BYU5 128 aa2.48□□□□□ -2.01
CD44-214ENST00000525211 SPRR2FQ96RM1 72 aa2.46□□□□□ -2.02
CD44-214ENST00000525211 CDC42SE1Q9NRR8 79 aa2.46□□□□□ -2.02
CD44-214ENST00000525211 KRTAP19-7Q3SYF9 63 aa2.45□□□□□ -2.02
CD44-214ENST00000525211 LCE3AQ5TA76 89 aa2.45□□□□□ -2.02
CD44-214ENST00000525211 KRTAP19-5Q3LI72 72 aa2.42□□□□□ -2.02
CD44-214ENST00000525211 TNP1P09430 55 aa2.41□□□□□ -2.02
CD44-214ENST00000525211 MT1EP04732 61 aa2.4□□□□□ -2.03
CD44-214ENST00000525211 KRTAP5-11Q6L8G4 156 aa2.4□□□□□ -2.03
CD44-214ENST00000525211 PRO0628Q9UI54 55 aa2.4□□□□□ -2.03
CD44-214ENST00000525211 SPRR2EP22531 72 aa2.39□□□□□ -2.03
CD44-214ENST00000525211 SPRR2BP35325 72 aa2.39□□□□□ -2.03
CD44-214ENST00000525211 SPRR2AP35326 72 aa2.39□□□□□ -2.03
CD44-214ENST00000525211 K7ERS5 55 aa2.38□□□□□ -2.03
CD44-214ENST00000525211 BRK1Q8WUW1 75 aa2.37□□□□□ -2.03
CD44-214ENST00000525211 ROMO1P60602 79 aa2.35□□□□□ -2.03
CD44-214ENST00000525211 KRTAP25-1Q3LHN0 102 aa2.35□□□□□ -2.03
CD44-214ENST00000525211 LCE3EQ5T5B0 92 aa2.35□□□□□ -2.03
CD44-214ENST00000525211 DSTQ03001 7570 aaKnown RBP2.35□□□□□ -2.03
CD44-214ENST00000525211 MT1LQ93083 61 aa2.33□□□□□ -2.04
CD44-214ENST00000525211 KRTAP9-6A8MVA2 160 aa2.32□□□□□ -2.04
CD44-214ENST00000525211 KRTAP19-3Q7Z4W3 81 aa2.32□□□□□ -2.04
CD44-214ENST00000525211 KRTAP12-3P60328 96 aa2.31□□□□□ -2.04
CD44-214ENST00000525211 SPRR2DP22532 72 aa2.3□□□□□ -2.04
CD44-214ENST00000525211 KRTAP4-3Q9BYR4 195 aa2.3□□□□□ -2.04
CD44-214ENST00000525211 PMAIP1Q13794 54 aa2.29□□□□□ -2.04
CD44-214ENST00000525211 SPRR5A0A1B0GTR4 108 aa2.27□□□□□ -2.05
CD44-214ENST00000525211 MT1MQ8N339 61 aa2.27□□□□□ -2.05
CD44-214ENST00000525211 AHNAK2Q8IVF2 5795 aa2.26□□□□□ -2.05
CD44-214ENST00000525211 MT1GP13640 62 aa2.25□□□□□ -2.05
CD44-214ENST00000525211 HMCN1Q96RW7 5635 aa2.23□□□□□ -2.05
CD44-214ENST00000525211 KRTAP5-10Q6L8G5 202 aa2.23□□□□□ -2.05
CD44-214ENST00000525211 KRTAP5-7Q6L8G8 165 aa2.2□□□□□ -2.06
CD44-214ENST00000525211 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.2□□□□□ -2.06
CD44-214ENST00000525211 PP632Q6XCG6 107 aa2.18□□□□□ -2.06
CD44-214ENST00000525211 KTN1-AS1Q86SY8 53 aa2.15□□□□□ -2.07
CD44-214ENST00000525211 KRTAP5-5Q701N2 237 aaPredicted RBP2.08□□□□□ -2.08
CD44-214ENST00000525211 AHNAKQ09666 5890 aaKnown RBP2.07□□□□□ -2.08
CD44-214ENST00000525211 KRTAP5-4Q6L8H1 288 aa2.06□□□□□ -2.08
CD44-214ENST00000525211 MT4P47944 62 aa2.05□□□□□ -2.08
CD44-214ENST00000525211 SYNE1Q8NF91 8797 aaKnown RBP2.02□□□□□ -2.09
CD44-214ENST00000525211 KRTAP6-1Q3LI64 71 aa1.99□□□□□ -2.09
CD44-214ENST00000525211 LCE3DQ9BYE3 92 aa1.99□□□□□ -2.09
CD44-214ENST00000525211 MT1AP04731 61 aa1.96□□□□□ -2.1
CD44-214ENST00000525211 LUZP6Q538Z0 58 aa1.95□□□□□ -2.1
CD44-214ENST00000525211 KRTAP5-1Q6L8H4 278 aa1.95□□□□□ -2.1
CD44-214ENST00000525211 KRTAP20-2Q3LI61 65 aa1.94□□□□□ -2.1
CD44-214ENST00000525211 MUC5BQ9HC84 5762 aaPredicted RBP1.92□□□□□ -2.1
CD44-214ENST00000525211 MUC5ACP98088 5654 aa1.92□□□□□ -2.1
CD44-214ENST00000525211 KRTAP12-4P60329 112 aa1.89□□□□□ -2.11
CD44-214ENST00000525211 KRTAP6-2Q3LI66 62 aa1.84□□□□□ -2.11
CD44-214ENST00000525211 KRTAP5-2Q701N4 177 aa1.84□□□□□ -2.11
CD44-214ENST00000525211 KRTAP4-4Q9BYR3 166 aa1.84□□□□□ -2.11
CD44-214ENST00000525211 KRTAP5-8O75690 187 aa1.77□□□□□ -2.13
CD44-214ENST00000525211 OBSCNQ5VST9 7968 aa1.74□□□□□ -2.13
CD44-214ENST00000525211 LCE1CQ5T751 118 aa1.68□□□□□ -2.14
CD44-214ENST00000525211 LCE1BQ5T7P3 118 aa1.68□□□□□ -2.14
CD44-214ENST00000525211 INE1O15225 51 aa1.52□□□□□ -2.17
CD44-214ENST00000525211 PHGR1C9JFL3 82 aa1.33□□□□□ -2.2
CD44-214ENST00000525211 KRTAP21-2Q3LI59 83 aa1.3□□□□□ -2.2
CD44-214ENST00000525211 MUC19Q7Z5P9 8384 aa1.28□□□□□ -2.2
CD44-214ENST00000525211 PRM1P04553 51 aa1.25□□□□□ -2.21
CD44-214ENST00000525211 KRTAP21-1Q3LI58 79 aa0.97□□□□□ -2.25
CD44-214ENST00000525211 MUC16Q8WXI7 14507 aa0.81□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 139.6 ms