RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 LOC100996750A0A140TA64 210 aa4.48□□□□□ -1.69
CAPN1-202ENST00000524773 DSTQ03001 7570 aaKnown RBP4.47□□□□□ -1.69
CAPN1-202ENST00000524773 KRTAP4-3Q9BYR4 195 aa4.46□□□□□ -1.7
CAPN1-202ENST00000524773 MT1LQ93083 61 aa4.45□□□□□ -1.7
CAPN1-202ENST00000524773 FCGBPQ9Y6R7 5405 aaPredicted RBP4.45□□□□□ -1.7
CAPN1-202ENST00000524773 LCE5AQ5TCM9 118 aa4.43□□□□□ -1.7
CAPN1-202ENST00000524773 CRCT1Q9UGL9 99 aa4.42□□□□□ -1.7
CAPN1-202ENST00000524773 MT1EP04732 61 aa4.41□□□□□ -1.7
CAPN1-202ENST00000524773 MT1GP13640 62 aa4.34□□□□□ -1.71
CAPN1-202ENST00000524773 KRTAP9-2Q9BYQ4 174 aa4.34□□□□□ -1.72
CAPN1-202ENST00000524773 KRTAP9-4Q9BYQ2 154 aa4.31□□□□□ -1.72
CAPN1-202ENST00000524773 SYNE2Q8WXH0 6885 aaKnown RBP4.28□□□□□ -1.72
CAPN1-202ENST00000524773 SYNE1Q8NF91 8797 aaKnown RBP4.26□□□□□ -1.73
CAPN1-202ENST00000524773 MACF1Q9UPN3 7388 aaKnown RBP4.24□□□□□ -1.73
CAPN1-202ENST00000524773 LCE1FQ5T754 118 aa4.2□□□□□ -1.74
CAPN1-202ENST00000524773 KRTAP12-4P60329 112 aa4.2□□□□□ -1.74
CAPN1-202ENST00000524773 KRTAP9-9Q9BYP9 154 aa4.18□□□□□ -1.74
CAPN1-202ENST00000524773 KRTAP4-9Q9BYQ8 210 aa4.16□□□□□ -1.74
CAPN1-202ENST00000524773 LCE4AQ5TA78 99 aa4.15□□□□□ -1.75
CAPN1-202ENST00000524773 MT1MQ8N339 61 aa4.12□□□□□ -1.75
CAPN1-202ENST00000524773 KRTAP9-6A0A140TA67 174 aa4.12□□□□□ -1.75
CAPN1-202ENST00000524773 KRTAP2-2Q9BYT5 123 aa4.12□□□□□ -1.75
CAPN1-202ENST00000524773 LCE3BQ5TA77 95 aa4.1□□□□□ -1.75
CAPN1-202ENST00000524773 OBSCNQ5VST9 7968 aa4.09□□□□□ -1.75
CAPN1-202ENST00000524773 SPRR2FQ96RM1 72 aa4.09□□□□□ -1.75
CAPN1-202ENST00000524773 KRTAP19-3Q7Z4W3 81 aa4.06□□□□□ -1.76
CAPN1-202ENST00000524773 KRTAP9-7A8MTY7 169 aa4.05□□□□□ -1.76
CAPN1-202ENST00000524773 MDN1Q9NU22 5596 aa3.98□□□□□ -1.77
CAPN1-202ENST00000524773 KRTAP5-9P26371 169 aa3.93□□□□□ -1.78
CAPN1-202ENST00000524773 LCE1EQ5T753 118 aa3.91□□□□□ -1.78
CAPN1-202ENST00000524773 KRTAP6-1Q3LI64 71 aa3.87□□□□□ -1.79
CAPN1-202ENST00000524773 LCE1AQ5T7P2 110 aa3.86□□□□□ -1.79
CAPN1-202ENST00000524773 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.84□□□□□ -1.79
CAPN1-202ENST00000524773 KRTAP6-3Q3LI67 103 aa3.82□□□□□ -1.8
CAPN1-202ENST00000524773 SPRR2EP22531 72 aa3.82□□□□□ -1.8
CAPN1-202ENST00000524773 SPRR2BP35325 72 aa3.82□□□□□ -1.8
CAPN1-202ENST00000524773 SPRR2AP35326 72 aa3.82□□□□□ -1.8
CAPN1-202ENST00000524773 MT1AP04731 61 aa3.81□□□□□ -1.8
CAPN1-202ENST00000524773 PRM1P04553 51 aa3.77□□□□□ -1.81
CAPN1-202ENST00000524773 LCE3DQ9BYE3 92 aa3.77□□□□□ -1.81
CAPN1-202ENST00000524773 KRTAP5-5Q701N2 237 aaPredicted RBP3.74□□□□□ -1.81
CAPN1-202ENST00000524773 LCE3EQ5T5B0 92 aa3.73□□□□□ -1.81
CAPN1-202ENST00000524773 LCE1DQ5T752 114 aa3.71□□□□□ -1.82
CAPN1-202ENST00000524773 SPRR2DP22532 72 aa3.67□□□□□ -1.82
CAPN1-202ENST00000524773 KRTAP6-2Q3LI66 62 aa3.57□□□□□ -1.84
CAPN1-202ENST00000524773 NEBP20929 6669 aa3.53□□□□□ -1.84
CAPN1-202ENST00000524773 MT3P25713 68 aa3.34□□□□□ -1.87
CAPN1-202ENST00000524773 KRTAP20-1Q3LI63 56 aa3.32□□□□□ -1.88
CAPN1-202ENST00000524773 KRTAP5-4Q6L8H1 288 aa3.31□□□□□ -1.88
CAPN1-202ENST00000524773 MT4P47944 62 aa3.22□□□□□ -1.89
CAPN1-202ENST00000524773 KRTAP4-6Q9BYQ5 205 aa3.2□□□□□ -1.9
CAPN1-202ENST00000524773 KRTAP20-2Q3LI61 65 aa3.12□□□□□ -1.91
CAPN1-202ENST00000524773 HMCN1Q96RW7 5635 aa3.09□□□□□ -1.91
CAPN1-202ENST00000524773 KRTAP5-2Q701N4 177 aa3.02□□□□□ -1.93
CAPN1-202ENST00000524773 KRTAP4-12Q9BQ66 201 aa3.02□□□□□ -1.93
CAPN1-202ENST00000524773 MUC5ACP98088 5654 aa3□□□□□ -1.93
CAPN1-202ENST00000524773 KRTAP5-3Q6L8H2 238 aa2.98□□□□□ -1.93
CAPN1-202ENST00000524773 MUC19Q7Z5P9 8384 aa2.92□□□□□ -1.94
CAPN1-202ENST00000524773 KRTAP4-11Q9BYQ6 195 aa2.9□□□□□ -1.94
CAPN1-202ENST00000524773 LCE1BQ5T7P3 118 aa2.85□□□□□ -1.95
CAPN1-202ENST00000524773 KRTAP5-10Q6L8G5 202 aa2.7□□□□□ -1.98
CAPN1-202ENST00000524773 AHNAK2Q8IVF2 5795 aa2.66□□□□□ -1.98
CAPN1-202ENST00000524773 GPR98Q8WXG9 6306 aa2.65□□□□□ -1.98
CAPN1-202ENST00000524773 KRTAP5-1Q6L8H4 278 aa2.62□□□□□ -1.99
CAPN1-202ENST00000524773 KRTAP5-7Q6L8G8 165 aa2.61□□□□□ -1.99
CAPN1-202ENST00000524773 LCE1CQ5T751 118 aa2.56□□□□□ -2
CAPN1-202ENST00000524773 KRTAP5-8O75690 187 aa2.55□□□□□ -2
CAPN1-202ENST00000524773 KRTAP4-2Q9BYR5 136 aa2.55□□□□□ -2
CAPN1-202ENST00000524773 KRTAP4-4Q9BYR3 166 aa2.49□□□□□ -2.01
CAPN1-202ENST00000524773 MUC5BQ9HC84 5762 aaPredicted RBP2.46□□□□□ -2.02
CAPN1-202ENST00000524773 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.44□□□□□ -2.02
CAPN1-202ENST00000524773 KRTAP21-2Q3LI59 83 aa2.43□□□□□ -2.02
CAPN1-202ENST00000524773 KRTAP21-1Q3LI58 79 aa2.25□□□□□ -2.05
CAPN1-202ENST00000524773 KRTAP5-11Q6L8G4 156 aa2.22□□□□□ -2.05
CAPN1-202ENST00000524773 AHNAKQ09666 5890 aaKnown RBP2.16□□□□□ -2.06
CAPN1-202ENST00000524773 PHGR1C9JFL3 82 aa1.92□□□□□ -2.1
CAPN1-202ENST00000524773 MUC16Q8WXI7 14507 aa1.29□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 76.8 ms