RNA–Protein interactions for RNA: ENST00000524646.1

PKP3-202, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 312 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-202ENST00000524646 KRTAP2-4Q9BYR9 128 aa3.07□□□□□ -1.92
PKP3-202ENST00000524646 KRTAP2-1Q9BYU5 128 aa3.07□□□□□ -1.92
PKP3-202ENST00000524646 SSPOA2VEC9 5147 aa3.06□□□□□ -1.92
PKP3-202ENST00000524646 KRTAP4-7Q9BYR0 210 aa3.05□□□□□ -1.92
PKP3-202ENST00000524646 KMT2DO14686 5537 aa3.03□□□□□ -1.92
PKP3-202ENST00000524646 KRTAP19-3Q7Z4W3 81 aa2.91□□□□□ -1.94
PKP3-202ENST00000524646 MT1MQ8N339 61 aa2.91□□□□□ -1.94
PKP3-202ENST00000524646 FCGBPQ9Y6R7 5405 aaPredicted RBP2.88□□□□□ -1.95
PKP3-202ENST00000524646 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.88□□□□□ -1.95
PKP3-202ENST00000524646 MT1GP13640 62 aa2.88□□□□□ -1.95
PKP3-202ENST00000524646 KRTAP4-3Q9BYR4 195 aa2.88□□□□□ -1.95
PKP3-202ENST00000524646 KRTAP9-7A8MTY7 169 aa2.86□□□□□ -1.95
PKP3-202ENST00000524646 LOC100996750A0A140TA64 210 aa2.85□□□□□ -1.95
PKP3-202ENST00000524646 MACF1Q9UPN3 7388 aaKnown RBP2.81□□□□□ -1.96
PKP3-202ENST00000524646 LCE5AQ5TCM9 118 aa2.79□□□□□ -1.96
PKP3-202ENST00000524646 SYNE2Q8WXH0 6885 aaKnown RBP2.78□□□□□ -1.96
PKP3-202ENST00000524646 SPRR2FQ96RM1 72 aa2.76□□□□□ -1.97
PKP3-202ENST00000524646 MUC12Q9UKN1 5478 aa2.69□□□□□ -1.98
PKP3-202ENST00000524646 KRTAP6-3Q3LI67 103 aa2.66□□□□□ -1.98
PKP3-202ENST00000524646 LCE3BQ5TA77 95 aa2.66□□□□□ -1.98
PKP3-202ENST00000524646 MT1AP04731 61 aa2.65□□□□□ -1.99
PKP3-202ENST00000524646 KRTAP12-4P60329 112 aa2.65□□□□□ -1.99
PKP3-202ENST00000524646 KRTAP6-1Q3LI64 71 aa2.61□□□□□ -1.99
PKP3-202ENST00000524646 NEBP20929 6669 aa2.61□□□□□ -1.99
PKP3-202ENST00000524646 KRTAP5-9P26371 169 aa2.6□□□□□ -1.99
PKP3-202ENST00000524646 LCE1AQ5T7P2 110 aa2.59□□□□□ -1.99
PKP3-202ENST00000524646 KRTAP5-5Q701N2 237 aaPredicted RBP2.58□□□□□ -2
PKP3-202ENST00000524646 KRTAP4-9Q9BYQ8 210 aa2.56□□□□□ -2
PKP3-202ENST00000524646 SPRR2EP22531 72 aa2.54□□□□□ -2
PKP3-202ENST00000524646 SPRR2BP35325 72 aa2.54□□□□□ -2
PKP3-202ENST00000524646 SPRR2AP35326 72 aa2.54□□□□□ -2
PKP3-202ENST00000524646 MDN1Q9NU22 5596 aa2.52□□□□□ -2.01
PKP3-202ENST00000524646 LCE3DQ9BYE3 92 aa2.51□□□□□ -2.01
PKP3-202ENST00000524646 LCE3EQ5T5B0 92 aa2.49□□□□□ -2.01
PKP3-202ENST00000524646 KRTAP20-1Q3LI63 56 aa2.48□□□□□ -2.01
PKP3-202ENST00000524646 KRTAP9-4Q9BYQ2 154 aa2.45□□□□□ -2.02
PKP3-202ENST00000524646 SYNE1Q8NF91 8797 aaKnown RBP2.44□□□□□ -2.02
PKP3-202ENST00000524646 SPRR2DP22532 72 aa2.43□□□□□ -2.02
PKP3-202ENST00000524646 DSTQ03001 7570 aaKnown RBP2.42□□□□□ -2.02
PKP3-202ENST00000524646 PRM1P04553 51 aa2.38□□□□□ -2.03
PKP3-202ENST00000524646 MT3P25713 68 aa2.34□□□□□ -2.03
PKP3-202ENST00000524646 KRTAP6-2Q3LI66 62 aa2.34□□□□□ -2.03
PKP3-202ENST00000524646 KRTAP2-2Q9BYT5 123 aa2.32□□□□□ -2.04
PKP3-202ENST00000524646 KRTAP5-4Q6L8H1 288 aa2.27□□□□□ -2.05
PKP3-202ENST00000524646 KRTAP5-2Q701N4 177 aa2.15□□□□□ -2.07
PKP3-202ENST00000524646 LCE4AQ5TA78 99 aa2.14□□□□□ -2.07
PKP3-202ENST00000524646 OBSCNQ5VST9 7968 aa2.14□□□□□ -2.07
PKP3-202ENST00000524646 GPR98Q8WXG9 6306 aa2.12□□□□□ -2.07
PKP3-202ENST00000524646 KRTAP20-2Q3LI61 65 aa2.12□□□□□ -2.07
PKP3-202ENST00000524646 KRTAP4-6Q9BYQ5 205 aa2.11□□□□□ -2.07
PKP3-202ENST00000524646 MT4P47944 62 aa2.1□□□□□ -2.07
PKP3-202ENST00000524646 LCE1DQ5T752 114 aa2.09□□□□□ -2.07
PKP3-202ENST00000524646 HMCN1Q96RW7 5635 aa2.06□□□□□ -2.08
PKP3-202ENST00000524646 KRTAP5-3Q6L8H2 238 aa2.01□□□□□ -2.09
PKP3-202ENST00000524646 AHNAK2Q8IVF2 5795 aa2□□□□□ -2.09
PKP3-202ENST00000524646 KRTAP5-10Q6L8G5 202 aa1.97□□□□□ -2.09
PKP3-202ENST00000524646 MUC5ACP98088 5654 aa1.94□□□□□ -2.1
PKP3-202ENST00000524646 LCE1EQ5T753 118 aa1.93□□□□□ -2.1
PKP3-202ENST00000524646 KRTAP5-7Q6L8G8 165 aa1.88□□□□□ -2.11
PKP3-202ENST00000524646 LCE1BQ5T7P3 118 aa1.85□□□□□ -2.11
PKP3-202ENST00000524646 KRTAP5-1Q6L8H4 278 aa1.85□□□□□ -2.11
PKP3-202ENST00000524646 KRTAP4-2Q9BYR5 136 aa1.83□□□□□ -2.12
PKP3-202ENST00000524646 LCE1CQ5T751 118 aa1.8□□□□□ -2.12
PKP3-202ENST00000524646 KRTAP4-11Q9BYQ6 195 aa1.77□□□□□ -2.13
PKP3-202ENST00000524646 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.74□□□□□ -2.13
PKP3-202ENST00000524646 KRTAP5-8O75690 187 aa1.71□□□□□ -2.14
PKP3-202ENST00000524646 KRTAP21-2Q3LI59 83 aa1.69□□□□□ -2.14
PKP3-202ENST00000524646 AHNAKQ09666 5890 aaKnown RBP1.65□□□□□ -2.14
PKP3-202ENST00000524646 MUC5BQ9HC84 5762 aaPredicted RBP1.65□□□□□ -2.15
PKP3-202ENST00000524646 KRTAP5-11Q6L8G4 156 aa1.59□□□□□ -2.15
PKP3-202ENST00000524646 KRTAP9-9Q9BYP9 154 aa1.59□□□□□ -2.15
PKP3-202ENST00000524646 KRTAP21-1Q3LI58 79 aa1.52□□□□□ -2.17
PKP3-202ENST00000524646 KRTAP4-4Q9BYR3 166 aa1.49□□□□□ -2.17
PKP3-202ENST00000524646 KRTAP4-12Q9BQ66 201 aa1.47□□□□□ -2.17
PKP3-202ENST00000524646 PHGR1C9JFL3 82 aa1.35□□□□□ -2.19
PKP3-202ENST00000524646 LCE1FQ5T754 118 aa1.32□□□□□ -2.2
PKP3-202ENST00000524646 MUC19Q7Z5P9 8384 aa1.26□□□□□ -2.21
PKP3-202ENST00000524646 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 121 ms