RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 KRTAP5-11Q6L8G4 156 aa3.03□□□□□ -1.92
VPS11-201ENST00000524454 MACF1Q9UPN3 7388 aaKnown RBP3.01□□□□□ -1.93
VPS11-201ENST00000524454 LCE1FQ5T754 118 aa3□□□□□ -1.93
VPS11-201ENST00000524454 PP632Q6XCG6 107 aa3□□□□□ -1.93
VPS11-201ENST00000524454 C10orf95Q9H7T3 257 aa3□□□□□ -1.93
VPS11-201ENST00000524454 LCE1EQ5T753 118 aa2.99□□□□□ -1.93
VPS11-201ENST00000524454 SYNE2Q8WXH0 6885 aaKnown RBP2.98□□□□□ -1.93
VPS11-201ENST00000524454 TNP1P09430 55 aa2.96□□□□□ -1.94
VPS11-201ENST00000524454 KRTAP10-5P60370 271 aa2.96□□□□□ -1.94
VPS11-201ENST00000524454 KRTAP6-3Q3LI67 103 aa2.93□□□□□ -1.94
VPS11-201ENST00000524454 PRO2289Q9P1D8 64 aa2.93□□□□□ -1.94
VPS11-201ENST00000524454 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.91□□□□□ -1.94
VPS11-201ENST00000524454 KRTAP10-12P60413 245 aa2.9□□□□□ -1.95
VPS11-201ENST00000524454 MT1XP80297 61 aa2.88□□□□□ -1.95
VPS11-201ENST00000524454 MUC12Q9UKN1 5478 aa2.82□□□□□ -1.96
VPS11-201ENST00000524454 KMT2DO14686 5537 aa2.81□□□□□ -1.96
VPS11-201ENST00000524454 KRTAP5-9P26371 169 aa2.8□□□□□ -1.96
VPS11-201ENST00000524454 LCE3CQ5T5A8 94 aa2.8□□□□□ -1.96
VPS11-201ENST00000524454 KRTAP8-1Q8IUC2 63 aa2.8□□□□□ -1.96
VPS11-201ENST00000524454 NEBP20929 6669 aa2.79□□□□□ -1.96
VPS11-201ENST00000524454 NDUFAF8A1L188 74 aa2.78□□□□□ -1.96
VPS11-201ENST00000524454 SPRR2FQ96RM1 72 aa2.77□□□□□ -1.97
VPS11-201ENST00000524454 LCE3AQ5TA76 89 aa2.75□□□□□ -1.97
VPS11-201ENST00000524454 SPRR2EP22531 72 aa2.73□□□□□ -1.97
VPS11-201ENST00000524454 SPRR2BP35325 72 aa2.73□□□□□ -1.97
VPS11-201ENST00000524454 SPRR2AP35326 72 aa2.73□□□□□ -1.97
VPS11-201ENST00000524454 MDN1Q9NU22 5596 aa2.72□□□□□ -1.97
VPS11-201ENST00000524454 KRTAP20-1Q3LI63 56 aa2.72□□□□□ -1.97
VPS11-201ENST00000524454 KRTAP9-6A8MVA2 160 aa2.7□□□□□ -1.98
VPS11-201ENST00000524454 KRTAP12-3P60328 96 aa2.68□□□□□ -1.98
VPS11-201ENST00000524454 SPRR5A0A1B0GTR4 108 aa2.67□□□□□ -1.98
VPS11-201ENST00000524454 KRTAP2-3P0C7H8 128 aa2.63□□□□□ -1.99
VPS11-201ENST00000524454 SPRR2DP22532 72 aa2.63□□□□□ -1.99
VPS11-201ENST00000524454 KRTAP2-4Q9BYR9 128 aa2.63□□□□□ -1.99
VPS11-201ENST00000524454 KRTAP19-5Q3LI72 72 aa2.59□□□□□ -1.99
VPS11-201ENST00000524454 LUZP6Q538Z0 58 aa2.59□□□□□ -1.99
VPS11-201ENST00000524454 KRTAP19-7Q3SYF9 63 aa2.57□□□□□ -2
VPS11-201ENST00000524454 LCE3EQ5T5B0 92 aa2.56□□□□□ -2
VPS11-201ENST00000524454 KRTAP5-1Q6L8H4 278 aa2.55□□□□□ -2
VPS11-201ENST00000524454 KRTAP2-1Q9BYU5 128 aa2.55□□□□□ -2
VPS11-201ENST00000524454 MT1EP04732 61 aa2.54□□□□□ -2
VPS11-201ENST00000524454 KRTAP19-3Q7Z4W3 81 aa2.49□□□□□ -2.01
VPS11-201ENST00000524454 MT1LQ93083 61 aa2.49□□□□□ -2.01
VPS11-201ENST00000524454 MT1GP13640 62 aa2.44□□□□□ -2.02
VPS11-201ENST00000524454 KRTAP4-4Q9BYR3 166 aa2.43□□□□□ -2.02
VPS11-201ENST00000524454 MT1MQ8N339 61 aa2.42□□□□□ -2.02
VPS11-201ENST00000524454 KRTAP4-3Q9BYR4 195 aa2.42□□□□□ -2.02
VPS11-201ENST00000524454 KRTAP5-4Q6L8H1 288 aa2.4□□□□□ -2.03
VPS11-201ENST00000524454 DSTQ03001 7570 aaKnown RBP2.4□□□□□ -2.03
VPS11-201ENST00000524454 GPR98Q8WXG9 6306 aa2.34□□□□□ -2.03
VPS11-201ENST00000524454 MT4P47944 62 aa2.32□□□□□ -2.04
VPS11-201ENST00000524454 HMCN1Q96RW7 5635 aa2.24□□□□□ -2.05
VPS11-201ENST00000524454 OBSCNQ5VST9 7968 aa2.24□□□□□ -2.05
VPS11-201ENST00000524454 KRTAP5-5Q701N2 237 aaPredicted RBP2.2□□□□□ -2.06
VPS11-201ENST00000524454 INE1O15225 51 aa2.19□□□□□ -2.06
VPS11-201ENST00000524454 AHNAK2Q8IVF2 5795 aa2.17□□□□□ -2.06
VPS11-201ENST00000524454 KRTAP20-2Q3LI61 65 aa2.15□□□□□ -2.07
VPS11-201ENST00000524454 MT1AP04731 61 aa2.14□□□□□ -2.07
VPS11-201ENST00000524454 KRTAP5-10Q6L8G5 202 aa2.12□□□□□ -2.07
VPS11-201ENST00000524454 KRTAP12-4P60329 112 aa2.11□□□□□ -2.07
VPS11-201ENST00000524454 LCE3DQ9BYE3 92 aa2.09□□□□□ -2.07
VPS11-201ENST00000524454 KRTAP6-1Q3LI64 71 aa2.07□□□□□ -2.08
VPS11-201ENST00000524454 SYNE1Q8NF91 8797 aaKnown RBP2.05□□□□□ -2.08
VPS11-201ENST00000524454 KRTAP5-7Q6L8G8 165 aa2.02□□□□□ -2.09
VPS11-201ENST00000524454 KRTAP5-2Q701N4 177 aa1.99□□□□□ -2.09
VPS11-201ENST00000524454 KRTAP6-2Q3LI66 62 aa1.97□□□□□ -2.09
VPS11-201ENST00000524454 LCE1CQ5T751 118 aa1.97□□□□□ -2.09
VPS11-201ENST00000524454 LCE1BQ5T7P3 118 aa1.97□□□□□ -2.09
VPS11-201ENST00000524454 KRTAP5-8O75690 187 aa1.89□□□□□ -2.11
VPS11-201ENST00000524454 AHNAKQ09666 5890 aaKnown RBP1.79□□□□□ -2.12
VPS11-201ENST00000524454 MUC5BQ9HC84 5762 aaPredicted RBP1.75□□□□□ -2.13
VPS11-201ENST00000524454 MUC5ACP98088 5654 aa1.75□□□□□ -2.13
VPS11-201ENST00000524454 PRM1P04553 51 aa1.61□□□□□ -2.15
VPS11-201ENST00000524454 MUC19Q7Z5P9 8384 aa1.6□□□□□ -2.15
VPS11-201ENST00000524454 KRTAP21-2Q3LI59 83 aa1.43□□□□□ -2.18
VPS11-201ENST00000524454 PHGR1C9JFL3 82 aa1.25□□□□□ -2.21
VPS11-201ENST00000524454 KRTAP21-1Q3LI58 79 aa1.05□□□□□ -2.24
VPS11-201ENST00000524454 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 244.9 ms