RNA–Protein interactions for RNA: ENST00000524280.5

TNIP1-219, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene TNIP1, Length 1,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-219ENST00000524280 KRTAP19-3Q7Z4W3 81 aa5.31□□□□□ -1.56
TNIP1-219ENST00000524280 MACF1Q9UPN3 7388 aaKnown RBP5.3□□□□□ -1.56
TNIP1-219ENST00000524280 KRTAP9-6A8MVA2 160 aa5.29□□□□□ -1.56
TNIP1-219ENST00000524280 MT1GP13640 62 aa5.29□□□□□ -1.56
TNIP1-219ENST00000524280 SPRR2FQ96RM1 72 aa5.26□□□□□ -1.57
TNIP1-219ENST00000524280 MT1MQ8N339 61 aa5.23□□□□□ -1.57
TNIP1-219ENST00000524280 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.19□□□□□ -1.58
TNIP1-219ENST00000524280 LCE5AQ5TCM9 118 aa5.18□□□□□ -1.58
TNIP1-219ENST00000524280 KRTAP9-7A8MTY7 169 aa5.17□□□□□ -1.58
TNIP1-219ENST00000524280 SYNE2Q8WXH0 6885 aaKnown RBP5.15□□□□□ -1.58
TNIP1-219ENST00000524280 KRTAP5-9P26371 169 aa5.14□□□□□ -1.59
TNIP1-219ENST00000524280 KRTAP4-3Q9BYR4 195 aa5.12□□□□□ -1.59
TNIP1-219ENST00000524280 MUC12Q9UKN1 5478 aa5.07□□□□□ -1.6
TNIP1-219ENST00000524280 KRTAP2-3P0C7H8 128 aa5.03□□□□□ -1.6
TNIP1-219ENST00000524280 KRTAP2-4Q9BYR9 128 aa5.03□□□□□ -1.6
TNIP1-219ENST00000524280 KRTAP2-1Q9BYU5 128 aa5.03□□□□□ -1.6
TNIP1-219ENST00000524280 LOC100996750A0A140TA64 210 aa5.01□□□□□ -1.61
TNIP1-219ENST00000524280 LCE1AQ5T7P2 110 aa5.01□□□□□ -1.61
TNIP1-219ENST00000524280 KRTAP6-3Q3LI67 103 aa4.98□□□□□ -1.61
TNIP1-219ENST00000524280 SPRR2EP22531 72 aa4.92□□□□□ -1.62
TNIP1-219ENST00000524280 SPRR2BP35325 72 aa4.92□□□□□ -1.62
TNIP1-219ENST00000524280 SPRR2AP35326 72 aa4.92□□□□□ -1.62
TNIP1-219ENST00000524280 INE1O15225 51 aa4.86□□□□□ -1.63
TNIP1-219ENST00000524280 MDN1Q9NU22 5596 aa4.83□□□□□ -1.64
TNIP1-219ENST00000524280 NEBP20929 6669 aa4.74□□□□□ -1.65
TNIP1-219ENST00000524280 SPRR2DP22532 72 aa4.73□□□□□ -1.65
TNIP1-219ENST00000524280 KRTAP5-5Q701N2 237 aaPredicted RBP4.7□□□□□ -1.66
TNIP1-219ENST00000524280 DSTQ03001 7570 aaKnown RBP4.67□□□□□ -1.66
TNIP1-219ENST00000524280 MT1AP04731 61 aa4.67□□□□□ -1.66
TNIP1-219ENST00000524280 KRTAP6-1Q3LI64 71 aa4.63□□□□□ -1.67
TNIP1-219ENST00000524280 LCE3BQ5TA77 95 aa4.53□□□□□ -1.68
TNIP1-219ENST00000524280 KRTAP20-1Q3LI63 56 aa4.49□□□□□ -1.69
TNIP1-219ENST00000524280 KRTAP9-4Q9BYQ2 154 aa4.43□□□□□ -1.7
TNIP1-219ENST00000524280 KRTAP5-4Q6L8H1 288 aa4.37□□□□□ -1.71
TNIP1-219ENST00000524280 SYNE1Q8NF91 8797 aaKnown RBP4.33□□□□□ -1.72
TNIP1-219ENST00000524280 KRTAP4-9Q9BYQ8 210 aa4.33□□□□□ -1.72
TNIP1-219ENST00000524280 KRTAP12-4P60329 112 aa4.3□□□□□ -1.72
TNIP1-219ENST00000524280 KRTAP2-2Q9BYT5 123 aa4.3□□□□□ -1.72
TNIP1-219ENST00000524280 LCE3DQ9BYE3 92 aa4.24□□□□□ -1.73
TNIP1-219ENST00000524280 MT3P25713 68 aa4.23□□□□□ -1.73
TNIP1-219ENST00000524280 LCE4AQ5TA78 99 aa4.23□□□□□ -1.73
TNIP1-219ENST00000524280 KRTAP6-2Q3LI66 62 aa4.21□□□□□ -1.73
TNIP1-219ENST00000524280 LCE3EQ5T5B0 92 aa4.16□□□□□ -1.74
TNIP1-219ENST00000524280 KRTAP4-6Q9BYQ5 205 aa4.11□□□□□ -1.75
TNIP1-219ENST00000524280 MT4P47944 62 aa4.09□□□□□ -1.76
TNIP1-219ENST00000524280 KRTAP20-2Q3LI61 65 aa4.06□□□□□ -1.76
TNIP1-219ENST00000524280 KRTAP5-2Q701N4 177 aa4.01□□□□□ -1.77
TNIP1-219ENST00000524280 LCE1DQ5T752 114 aa3.99□□□□□ -1.77
TNIP1-219ENST00000524280 KRTAP5-3Q6L8H2 238 aa3.91□□□□□ -1.78
TNIP1-219ENST00000524280 HMCN1Q96RW7 5635 aa3.91□□□□□ -1.78
TNIP1-219ENST00000524280 GPR98Q8WXG9 6306 aa3.86□□□□□ -1.79
TNIP1-219ENST00000524280 OBSCNQ5VST9 7968 aa3.74□□□□□ -1.81
TNIP1-219ENST00000524280 PRM1P04553 51 aa3.73□□□□□ -1.81
TNIP1-219ENST00000524280 LCE1EQ5T753 118 aa3.62□□□□□ -1.83
TNIP1-219ENST00000524280 AHNAK2Q8IVF2 5795 aa3.59□□□□□ -1.84
TNIP1-219ENST00000524280 KRTAP5-10Q6L8G5 202 aa3.53□□□□□ -1.84
TNIP1-219ENST00000524280 KRTAP4-11Q9BYQ6 195 aa3.45□□□□□ -1.86
TNIP1-219ENST00000524280 KRTAP5-7Q6L8G8 165 aa3.44□□□□□ -1.86
TNIP1-219ENST00000524280 KRTAP5-1Q6L8H4 278 aa3.43□□□□□ -1.86
TNIP1-219ENST00000524280 LCE1CQ5T751 118 aa3.38□□□□□ -1.87
TNIP1-219ENST00000524280 LCE1BQ5T7P3 118 aa3.38□□□□□ -1.87
TNIP1-219ENST00000524280 KRTAP4-2Q9BYR5 136 aa3.36□□□□□ -1.87
TNIP1-219ENST00000524280 KRTAP5-8O75690 187 aa3.32□□□□□ -1.88
TNIP1-219ENST00000524280 MUC5ACP98088 5654 aa3.3□□□□□ -1.88
TNIP1-219ENST00000524280 KRTAP9-9Q9BYP9 154 aa3.2□□□□□ -1.9
TNIP1-219ENST00000524280 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.19□□□□□ -1.9
TNIP1-219ENST00000524280 KRTAP21-2Q3LI59 83 aa3.03□□□□□ -1.92
TNIP1-219ENST00000524280 AHNAKQ09666 5890 aaKnown RBP2.97□□□□□ -1.93
TNIP1-219ENST00000524280 MUC5BQ9HC84 5762 aaPredicted RBP2.96□□□□□ -1.94
TNIP1-219ENST00000524280 KRTAP5-11Q6L8G4 156 aa2.95□□□□□ -1.94
TNIP1-219ENST00000524280 LCE1FQ5T754 118 aa2.92□□□□□ -1.94
TNIP1-219ENST00000524280 KRTAP4-12Q9BQ66 201 aa2.81□□□□□ -1.96
TNIP1-219ENST00000524280 KRTAP4-4Q9BYR3 166 aa2.65□□□□□ -1.99
TNIP1-219ENST00000524280 PHGR1C9JFL3 82 aa2.53□□□□□ -2
TNIP1-219ENST00000524280 KRTAP21-1Q3LI58 79 aa2.35□□□□□ -2.03
TNIP1-219ENST00000524280 MUC19Q7Z5P9 8384 aa2.17□□□□□ -2.06
TNIP1-219ENST00000524280 MUC16Q8WXI7 14507 aa1.7□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 67.8 ms