RNA–Protein interactions for RNA: ENST00000524115.2

NKX6-3-202, Transcript of NK6 homeobox 3, humanhuman

TSL 2 BASIC

Gene NKX6-3, Length 1,683 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3-202ENST00000524115 KRTAP19-5Q3LI72 72 aa8.34□□□□□ -1.08
NKX6-3-202ENST00000524115 SPRR2FQ96RM1 72 aa8.27□□□□□ -1.08
NKX6-3-202ENST00000524115 KRTAP19-4Q3LI73 84 aa8.27□□□□□ -1.09
NKX6-3-202ENST00000524115 KRTAP20-1Q3LI63 56 aa8.23□□□□□ -1.09
NKX6-3-202ENST00000524115 LCE3CQ5T5A8 94 aa8.22□□□□□ -1.09
NKX6-3-202ENST00000524115 KRTAP4-8A0A0G2JLE6 195 aa8.18□□□□□ -1.1
NKX6-3-202ENST00000524115 KRTAP4-8Q9BYQ9 185 aa8.18□□□□□ -1.1
NKX6-3-202ENST00000524115 SPRR2EP22531 72 aa8.14□□□□□ -1.11
NKX6-3-202ENST00000524115 SPRR2BP35325 72 aa8.14□□□□□ -1.11
NKX6-3-202ENST00000524115 SPRR2AP35326 72 aa8.14□□□□□ -1.11
NKX6-3-202ENST00000524115 LCE1AQ5T7P2 110 aa8.05□□□□□ -1.12
NKX6-3-202ENST00000524115 KRTAP2-3P0C7H8 128 aa8.04□□□□□ -1.12
NKX6-3-202ENST00000524115 KRTAP2-4Q9BYR9 128 aa8.04□□□□□ -1.12
NKX6-3-202ENST00000524115 KRTAP19-7Q3SYF9 63 aa8.02□□□□□ -1.13
NKX6-3-202ENST00000524115 INE1O15225 51 aa8.02□□□□□ -1.13
NKX6-3-202ENST00000524115 SPRR2DP22532 72 aa7.86□□□□□ -1.15
NKX6-3-202ENST00000524115 MT1EP04732 61 aa7.86□□□□□ -1.15
NKX6-3-202ENST00000524115 MT1LQ93083 61 aa7.83□□□□□ -1.16
NKX6-3-202ENST00000524115 KRTAP2-2Q9BYT5 123 aa7.78□□□□□ -1.16
NKX6-3-202ENST00000524115 KRTAP2-1Q9BYU5 128 aa7.78□□□□□ -1.16
NKX6-3-202ENST00000524115 KRTAP9-6A8MVA2 160 aa7.7□□□□□ -1.18
NKX6-3-202ENST00000524115 LCE3BQ5TA77 95 aa7.65□□□□□ -1.18
NKX6-3-202ENST00000524115 KRTAP4-7Q9BYR0 210 aa7.59□□□□□ -1.19
NKX6-3-202ENST00000524115 LCE5AQ5TCM9 118 aa7.51□□□□□ -1.21
NKX6-3-202ENST00000524115 KRTAP19-3Q7Z4W3 81 aa7.49□□□□□ -1.21
NKX6-3-202ENST00000524115 MT1GP13640 62 aa7.45□□□□□ -1.22
NKX6-3-202ENST00000524115 DSTQ03001 7570 aaKnown RBP7.38□□□□□ -1.23
NKX6-3-202ENST00000524115 MT1MQ8N339 61 aa7.35□□□□□ -1.23
NKX6-3-202ENST00000524115 KRTAP4-3Q9BYR4 195 aa7.16□□□□□ -1.26
NKX6-3-202ENST00000524115 KRTAP4-9Q9BYQ8 210 aa7.12□□□□□ -1.27
NKX6-3-202ENST00000524115 LOC100996750A0A140TA64 210 aa7.09□□□□□ -1.27
NKX6-3-202ENST00000524115 LCE1DQ5T752 114 aa6.96□□□□□ -1.3
NKX6-3-202ENST00000524115 LCE4AQ5TA78 99 aa6.95□□□□□ -1.3
NKX6-3-202ENST00000524115 GPR98Q8WXG9 6306 aa6.92□□□□□ -1.3
NKX6-3-202ENST00000524115 MT4P47944 62 aa6.88□□□□□ -1.31
NKX6-3-202ENST00000524115 HMCN1Q96RW7 5635 aa6.86□□□□□ -1.31
NKX6-3-202ENST00000524115 KRTAP5-4Q6L8H1 288 aa6.84□□□□□ -1.31
NKX6-3-202ENST00000524115 KRTAP4-6Q9BYQ5 205 aa6.71□□□□□ -1.34
NKX6-3-202ENST00000524115 MT1AP04731 61 aa6.68□□□□□ -1.34
NKX6-3-202ENST00000524115 KRTAP5-5Q701N2 237 aaPredicted RBP6.6□□□□□ -1.35
NKX6-3-202ENST00000524115 KRTAP12-4P60329 112 aa6.58□□□□□ -1.36
NKX6-3-202ENST00000524115 AHNAK2Q8IVF2 5795 aa6.57□□□□□ -1.36
NKX6-3-202ENST00000524115 KRTAP6-1Q3LI64 71 aa6.55□□□□□ -1.36
NKX6-3-202ENST00000524115 KRTAP20-2Q3LI61 65 aa6.45□□□□□ -1.38
NKX6-3-202ENST00000524115 KRTAP5-10Q6L8G5 202 aa6.44□□□□□ -1.38
NKX6-3-202ENST00000524115 SYNE1Q8NF91 8797 aaKnown RBP6.37□□□□□ -1.39
NKX6-3-202ENST00000524115 LCE3DQ9BYE3 92 aa6.32□□□□□ -1.4
NKX6-3-202ENST00000524115 KRTAP5-3Q6L8H2 238 aa6.31□□□□□ -1.4
NKX6-3-202ENST00000524115 KRTAP9-4Q9BYQ2 154 aa6.27□□□□□ -1.41
NKX6-3-202ENST00000524115 LCE3EQ5T5B0 92 aa6.25□□□□□ -1.41
NKX6-3-202ENST00000524115 KRTAP5-7Q6L8G8 165 aa6.18□□□□□ -1.42
NKX6-3-202ENST00000524115 MT3P25713 68 aa6.04□□□□□ -1.44
NKX6-3-202ENST00000524115 KRTAP5-2Q701N4 177 aa6□□□□□ -1.45
NKX6-3-202ENST00000524115 KRTAP6-2Q3LI66 62 aa5.91□□□□□ -1.46
NKX6-3-202ENST00000524115 KRTAP4-11Q9BYQ6 195 aa5.89□□□□□ -1.47
NKX6-3-202ENST00000524115 PRM1P04553 51 aa5.76□□□□□ -1.49
NKX6-3-202ENST00000524115 KRTAP5-8O75690 187 aa5.69□□□□□ -1.5
NKX6-3-202ENST00000524115 OBSCNQ5VST9 7968 aa5.63□□□□□ -1.51
NKX6-3-202ENST00000524115 MUC5BQ9HC84 5762 aaPredicted RBP5.43□□□□□ -1.54
NKX6-3-202ENST00000524115 AHNAKQ09666 5890 aaKnown RBP5.41□□□□□ -1.54
NKX6-3-202ENST00000524115 MUC5ACP98088 5654 aa5.4□□□□□ -1.54
NKX6-3-202ENST00000524115 KRTAP5-1Q6L8H4 278 aa5.38□□□□□ -1.55
NKX6-3-202ENST00000524115 KRTAP9-9Q9BYP9 154 aa5.38□□□□□ -1.55
NKX6-3-202ENST00000524115 LCE1EQ5T753 118 aa5.16□□□□□ -1.58
NKX6-3-202ENST00000524115 KRTAP4-2Q9BYR5 136 aa4.88□□□□□ -1.63
NKX6-3-202ENST00000524115 LCE1BQ5T7P3 118 aa4.87□□□□□ -1.63
NKX6-3-202ENST00000524115 LCE1CQ5T751 118 aa4.8□□□□□ -1.64
NKX6-3-202ENST00000524115 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.48□□□□□ -1.69
NKX6-3-202ENST00000524115 KRTAP4-12Q9BQ66 201 aa4.41□□□□□ -1.7
NKX6-3-202ENST00000524115 KRTAP5-11Q6L8G4 156 aa4.32□□□□□ -1.72
NKX6-3-202ENST00000524115 KRTAP21-2Q3LI59 83 aa4.27□□□□□ -1.73
NKX6-3-202ENST00000524115 LCE1FQ5T754 118 aa4.2□□□□□ -1.74
NKX6-3-202ENST00000524115 PHGR1C9JFL3 82 aa3.75□□□□□ -1.81
NKX6-3-202ENST00000524115 KRTAP4-4Q9BYR3 166 aa3.7□□□□□ -1.82
NKX6-3-202ENST00000524115 KRTAP21-1Q3LI58 79 aa3.69□□□□□ -1.82
NKX6-3-202ENST00000524115 MUC19Q7Z5P9 8384 aa3.47□□□□□ -1.85
NKX6-3-202ENST00000524115 MUC16Q8WXI7 14507 aa2.47□□□□□ -2.01
Retrieved 77 of 20,778 RNA–protein pairs in 11.6 ms