RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 FAT3Q8TDW7 4589 aa1.1□□□□□ -2.23
SKP1-212ENST00000523966 H0YAA0 97 aa1.1□□□□□ -2.23
SKP1-212ENST00000523966 UQCR11O14957 56 aa1.1□□□□□ -2.23
SKP1-212ENST00000523966 Q5VV11 94 aa1.1□□□□□ -2.23
SKP1-212ENST00000523966 MIR22HGQ0VDD5 57 aa1.09□□□□□ -2.23
SKP1-212ENST00000523966 MUC2Q02817 5179 aa1.09□□□□□ -2.24
SKP1-212ENST00000523966 AHNAKQ09666 5890 aaKnown RBP1.08□□□□□ -2.24
SKP1-212ENST00000523966 CDC42SE1Q9NRR8 79 aa1.08□□□□□ -2.24
SKP1-212ENST00000523966 MACF1Q9UPN3 7388 aaKnown RBP1.08□□□□□ -2.24
SKP1-212ENST00000523966 LRP2P98164 4655 aa1.07□□□□□ -2.24
SKP1-212ENST00000523966 M0QZ58 72 aa1.07□□□□□ -2.24
SKP1-212ENST00000523966 SPATA8Q6RVD6 105 aa1.07□□□□□ -2.24
SKP1-212ENST00000523966 KRTAP4-1Q9BYQ7 146 aa1.07□□□□□ -2.24
SKP1-212ENST00000523966 ABCA13Q86UQ4 5058 aa1.06□□□□□ -2.24
SKP1-212ENST00000523966 M0R2T5 61 aa1.05□□□□□ -2.24
SKP1-212ENST00000523966 KRTAP19-2Q3LHN2 52 aa1.05□□□□□ -2.24
SKP1-212ENST00000523966 CRIPTQ9P021 101 aa1.05□□□□□ -2.24
SKP1-212ENST00000523966 INE1O15225 51 aa1.04□□□□□ -2.24
SKP1-212ENST00000523966 FLGP20930 4061 aaPredicted RBP1.04□□□□□ -2.24
SKP1-212ENST00000523966 LPAP08519 4548 aa1.03□□□□□ -2.24
SKP1-212ENST00000523966 FCGBPQ9Y6R7 5405 aaPredicted RBP1.03□□□□□ -2.24
SKP1-212ENST00000523966 HERC1Q15751 4861 aa1.03□□□□□ -2.25
SKP1-212ENST00000523966 A0A0D9SG42 100 aa1.01□□□□□ -2.25
SKP1-212ENST00000523966 MT1HP80294 61 aa1.01□□□□□ -2.25
SKP1-212ENST00000523966 AHNAK2Q8IVF2 5795 aa1□□□□□ -2.25
SKP1-212ENST00000523966 HMCN2Q8NDA2 5059 aa1□□□□□ -2.25
SKP1-212ENST00000523966 PLAC4Q8WY50 150 aa0.99□□□□□ -2.25
SKP1-212ENST00000523966 SPRR2GQ9BYE4 73 aa0.99□□□□□ -2.25
SKP1-212ENST00000523966 MUC5BQ9HC84 5762 aaPredicted RBP0.99□□□□□ -2.25
SKP1-212ENST00000523966 MUC17Q685J3 4493 aa0.98□□□□□ -2.25
SKP1-212ENST00000523966 MT2AP02795 61 aa0.98□□□□□ -2.25
SKP1-212ENST00000523966 MT1FP04733 61 aa0.97□□□□□ -2.25
SKP1-212ENST00000523966 KRTAP19-8Q3LI54 63 aa0.96□□□□□ -2.26
SKP1-212ENST00000523966 TNP1P09430 55 aa0.95□□□□□ -2.26
SKP1-212ENST00000523966 RNF213Q63HN8 5207 aa0.95□□□□□ -2.26
SKP1-212ENST00000523966 FAT4Q6V0I7 4981 aa0.94□□□□□ -2.26
SKP1-212ENST00000523966 C10orf95Q9H7T3 257 aa0.93□□□□□ -2.26
SKP1-212ENST00000523966 DSTQ03001 7570 aaKnown RBP0.93□□□□□ -2.26
SKP1-212ENST00000523966 SYNE2Q8WXH0 6885 aaKnown RBP0.92□□□□□ -2.26
SKP1-212ENST00000523966 MT1BP07438 61 aa0.92□□□□□ -2.26
SKP1-212ENST00000523966 MT1XP80297 61 aa0.9□□□□□ -2.27
SKP1-212ENST00000523966 NEBP20929 6669 aa0.88□□□□□ -2.27
SKP1-212ENST00000523966 KRTAP19-6Q3LI70 58 aa0.88□□□□□ -2.27
SKP1-212ENST00000523966 KMT2DO14686 5537 aa0.86□□□□□ -2.27
SKP1-212ENST00000523966 KRTAP8-1Q8IUC2 63 aa0.86□□□□□ -2.27
SKP1-212ENST00000523966 FSIP2Q5CZC0 6907 aa0.85□□□□□ -2.27
SKP1-212ENST00000523966 MDN1Q9NU22 5596 aa0.84□□□□□ -2.28
SKP1-212ENST00000523966 KRTAP19-5Q3LI72 72 aa0.82□□□□□ -2.28
SKP1-212ENST00000523966 USH2AO75445 5202 aa0.81□□□□□ -2.28
SKP1-212ENST00000523966 MUC5ACP98088 5654 aa0.8□□□□□ -2.28
SKP1-212ENST00000523966 KRTAP19-7Q3SYF9 63 aa0.8□□□□□ -2.28
SKP1-212ENST00000523966 MT1EP04732 61 aa0.79□□□□□ -2.28
SKP1-212ENST00000523966 SSPOA2VEC9 5147 aa0.79□□□□□ -2.28
SKP1-212ENST00000523966 MT1GP13640 62 aa0.78□□□□□ -2.28
SKP1-212ENST00000523966 MT1LQ93083 61 aa0.78□□□□□ -2.28
SKP1-212ENST00000523966 KRTAP19-3Q7Z4W3 81 aa0.77□□□□□ -2.29
SKP1-212ENST00000523966 SPRR2FQ96RM1 72 aa0.77□□□□□ -2.29
SKP1-212ENST00000523966 MT1MQ8N339 61 aa0.74□□□□□ -2.29
SKP1-212ENST00000523966 SPRR2EP22531 72 aa0.73□□□□□ -2.29
SKP1-212ENST00000523966 SPRR2BP35325 72 aa0.73□□□□□ -2.29
SKP1-212ENST00000523966 SPRR2AP35326 72 aa0.73□□□□□ -2.29
SKP1-212ENST00000523966 KRTAP5-10Q6L8G5 202 aa0.72□□□□□ -2.29
SKP1-212ENST00000523966 SPRR2DP22532 72 aa0.7□□□□□ -2.3
SKP1-212ENST00000523966 MUC16Q8WXI7 14507 aa0.69□□□□□ -2.3
SKP1-212ENST00000523966 MUC12Q9UKN1 5478 aa0.69□□□□□ -2.3
SKP1-212ENST00000523966 KRTAP2-3P0C7H8 128 aa0.69□□□□□ -2.3
SKP1-212ENST00000523966 KRTAP2-4Q9BYR9 128 aa0.69□□□□□ -2.3
SKP1-212ENST00000523966 KRTAP2-1Q9BYU5 128 aa0.69□□□□□ -2.3
SKP1-212ENST00000523966 MT1AP04731 61 aa0.67□□□□□ -2.3
SKP1-212ENST00000523966 KRTAP20-1Q3LI63 56 aa0.67□□□□□ -2.3
SKP1-212ENST00000523966 KRTAP6-1Q3LI64 71 aa0.64□□□□□ -2.31
SKP1-212ENST00000523966 KRTAP6-2Q3LI66 62 aa0.6□□□□□ -2.31
SKP1-212ENST00000523966 MT4P47944 62 aa0.59□□□□□ -2.31
SKP1-212ENST00000523966 KRTAP20-2Q3LI61 65 aa0.59□□□□□ -2.31
SKP1-212ENST00000523966 SYNE1Q8NF91 8797 aaKnown RBP0.58□□□□□ -2.32
SKP1-212ENST00000523966 KRTAP21-1Q3LI58 79 aa0.5□□□□□ -2.33
SKP1-212ENST00000523966 PRM1P04553 51 aa0.49□□□□□ -2.33
SKP1-212ENST00000523966 PHGR1C9JFL3 82 aa0.4□□□□□ -2.35
Retrieved 78 of 20,778 RNA–protein pairs in 72 ms