RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 KRTAP23-1A1A580 65 aa4.77□□□□□ -1.65
VEGFA-225ENST00000523950 TNP1P09430 55 aa4.74□□□□□ -1.65
VEGFA-225ENST00000523950 KRTAP2-3P0C7H8 128 aa4.72□□□□□ -1.65
VEGFA-225ENST00000523950 KRTAP2-4Q9BYR9 128 aa4.72□□□□□ -1.65
VEGFA-225ENST00000523950 KRTAP15-1Q3LI76 137 aa4.71□□□□□ -1.66
VEGFA-225ENST00000523950 KRTAP19-7Q3SYF9 63 aa4.71□□□□□ -1.66
VEGFA-225ENST00000523950 SPRR2DP22532 72 aa4.69□□□□□ -1.66
VEGFA-225ENST00000523950 MT1EP04732 61 aa4.66□□□□□ -1.66
VEGFA-225ENST00000523950 KRTAP19-5Q3LI72 72 aa4.62□□□□□ -1.67
VEGFA-225ENST00000523950 KRTAP19-3Q7Z4W3 81 aa4.61□□□□□ -1.67
VEGFA-225ENST00000523950 LCE3AQ5TA76 89 aa4.6□□□□□ -1.67
VEGFA-225ENST00000523950 LCE5AQ5TCM9 118 aa4.59□□□□□ -1.67
VEGFA-225ENST00000523950 KRTAP2-2Q9BYT5 123 aa4.58□□□□□ -1.68
VEGFA-225ENST00000523950 KRTAP2-1Q9BYU5 128 aa4.58□□□□□ -1.68
VEGFA-225ENST00000523950 LCE3BQ5TA77 95 aa4.56□□□□□ -1.68
VEGFA-225ENST00000523950 H3BS24 57 aa4.55□□□□□ -1.68
VEGFA-225ENST00000523950 MT1GP13640 62 aa4.52□□□□□ -1.69
VEGFA-225ENST00000523950 MT1LQ93083 61 aa4.48□□□□□ -1.69
VEGFA-225ENST00000523950 NDUFAF8A1L188 74 aa4.47□□□□□ -1.69
VEGFA-225ENST00000523950 KRTAP12-3P60328 96 aa4.46□□□□□ -1.7
VEGFA-225ENST00000523950 LUZP6Q538Z0 58 aa4.45□□□□□ -1.7
VEGFA-225ENST00000523950 KRTAP4-12Q9BQ66 201 aa4.44□□□□□ -1.7
VEGFA-225ENST00000523950 MT1MQ8N339 61 aa4.43□□□□□ -1.7
VEGFA-225ENST00000523950 SPRR5A0A1B0GTR4 108 aa4.36□□□□□ -1.71
VEGFA-225ENST00000523950 DSTQ03001 7570 aaKnown RBP4.32□□□□□ -1.72
VEGFA-225ENST00000523950 KRTAP19-4Q3LI73 84 aa4.31□□□□□ -1.72
VEGFA-225ENST00000523950 KRTAP9-9Q9BYP9 154 aa4.25□□□□□ -1.73
VEGFA-225ENST00000523950 KRTAP9-4Q9BYQ2 154 aa4.25□□□□□ -1.73
VEGFA-225ENST00000523950 KRTAP4-3Q9BYR4 195 aa4.25□□□□□ -1.73
VEGFA-225ENST00000523950 KRTAP4-7Q9BYR0 210 aa4.21□□□□□ -1.74
VEGFA-225ENST00000523950 LCE4AQ5TA78 99 aa4.2□□□□□ -1.74
VEGFA-225ENST00000523950 A0A0A0MQY5 61 aa4.18□□□□□ -1.74
VEGFA-225ENST00000523950 KRTAP5-4Q6L8H1 288 aa4.14□□□□□ -1.75
VEGFA-225ENST00000523950 KRTAP4-9Q9BYQ8 210 aa4.14□□□□□ -1.75
VEGFA-225ENST00000523950 LCE3CQ5T5A8 94 aa4.11□□□□□ -1.75
VEGFA-225ENST00000523950 LCE1DQ5T752 114 aa4.1□□□□□ -1.75
VEGFA-225ENST00000523950 MT4P47944 62 aa4.06□□□□□ -1.76
VEGFA-225ENST00000523950 KRTAP5-5Q701N2 237 aaPredicted RBP4.05□□□□□ -1.76
VEGFA-225ENST00000523950 HMCN1Q96RW7 5635 aa3.96□□□□□ -1.77
VEGFA-225ENST00000523950 KRTAP12-4P60329 112 aa3.92□□□□□ -1.78
VEGFA-225ENST00000523950 KRTAP20-2Q3LI61 65 aa3.88□□□□□ -1.79
VEGFA-225ENST00000523950 INE1O15225 51 aa3.87□□□□□ -1.79
VEGFA-225ENST00000523950 MT1AP04731 61 aa3.84□□□□□ -1.79
VEGFA-225ENST00000523950 KRTAP4-11Q9BYQ6 195 aa3.84□□□□□ -1.79
VEGFA-225ENST00000523950 GPR98Q8WXG9 6306 aa3.84□□□□□ -1.8
VEGFA-225ENST00000523950 KRTAP9-6A8MVA2 160 aa3.83□□□□□ -1.8
VEGFA-225ENST00000523950 KRTAP4-2Q9BYR5 136 aa3.83□□□□□ -1.8
VEGFA-225ENST00000523950 SYNE1Q8NF91 8797 aaKnown RBP3.81□□□□□ -1.8
VEGFA-225ENST00000523950 AHNAK2Q8IVF2 5795 aa3.76□□□□□ -1.81
VEGFA-225ENST00000523950 KRTAP6-1Q3LI64 71 aa3.76□□□□□ -1.81
VEGFA-225ENST00000523950 KRTAP5-3Q6L8H2 238 aa3.76□□□□□ -1.81
VEGFA-225ENST00000523950 KRTAP5-10Q6L8G5 202 aa3.73□□□□□ -1.81
VEGFA-225ENST00000523950 KRTAP5-2Q701N4 177 aa3.66□□□□□ -1.82
VEGFA-225ENST00000523950 KRTAP5-7Q6L8G8 165 aa3.58□□□□□ -1.84
VEGFA-225ENST00000523950 KRTAP6-2Q3LI66 62 aa3.56□□□□□ -1.84
VEGFA-225ENST00000523950 MT3P25713 68 aa3.51□□□□□ -1.85
VEGFA-225ENST00000523950 KRTAP5-8O75690 187 aa3.37□□□□□ -1.87
VEGFA-225ENST00000523950 OBSCNQ5VST9 7968 aa3.24□□□□□ -1.89
VEGFA-225ENST00000523950 KRTAP5-1Q6L8H4 278 aa3.23□□□□□ -1.89
VEGFA-225ENST00000523950 LCE1EQ5T753 118 aa3.2□□□□□ -1.9
VEGFA-225ENST00000523950 MUC5ACP98088 5654 aa3.09□□□□□ -1.92
VEGFA-225ENST00000523950 MUC5BQ9HC84 5762 aaPredicted RBP3.06□□□□□ -1.92
VEGFA-225ENST00000523950 AHNAKQ09666 5890 aaKnown RBP3.01□□□□□ -1.93
VEGFA-225ENST00000523950 LCE3DQ9BYE3 92 aa3.01□□□□□ -1.93
VEGFA-225ENST00000523950 LCE3EQ5T5B0 92 aa2.99□□□□□ -1.93
VEGFA-225ENST00000523950 LCE1CQ5T751 118 aa2.96□□□□□ -1.94
VEGFA-225ENST00000523950 LCE1BQ5T7P3 118 aa2.96□□□□□ -1.94
VEGFA-225ENST00000523950 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.73□□□□□ -1.97
VEGFA-225ENST00000523950 PRM1P04553 51 aa2.7□□□□□ -1.98
VEGFA-225ENST00000523950 KRTAP5-11Q6L8G4 156 aa2.67□□□□□ -1.98
VEGFA-225ENST00000523950 LCE1FQ5T754 118 aa2.58□□□□□ -2
VEGFA-225ENST00000523950 KRTAP21-2Q3LI59 83 aa2.49□□□□□ -2.01
VEGFA-225ENST00000523950 PHGR1C9JFL3 82 aa2.28□□□□□ -2.04
VEGFA-225ENST00000523950 KRTAP4-4Q9BYR3 166 aa2.2□□□□□ -2.06
VEGFA-225ENST00000523950 MUC19Q7Z5P9 8384 aa1.99□□□□□ -2.09
VEGFA-225ENST00000523950 KRTAP21-1Q3LI58 79 aa1.77□□□□□ -2.13
VEGFA-225ENST00000523950 MUC16Q8WXI7 14507 aa1.46□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 6.5 ms