RNA–Protein interactions for RNA: ENST00000523517.5

IKBKB-228, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 1 (best)

Gene IKBKB, Length 2,378 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-228ENST00000523517 KRTAP19-6Q3LI70 58 aa6.08□□□□□ -1.44
IKBKB-228ENST00000523517 FSIP2Q5CZC0 6907 aa5.84□□□□□ -1.47
IKBKB-228ENST00000523517 KRTAP4-3Q9BYR4 195 aa5.84□□□□□ -1.47
IKBKB-228ENST00000523517 LOC100996750A0A140TA64 210 aa5.81□□□□□ -1.48
IKBKB-228ENST00000523517 KRTAP19-3Q7Z4W3 81 aa5.78□□□□□ -1.48
IKBKB-228ENST00000523517 MT1MQ8N339 61 aa5.78□□□□□ -1.48
IKBKB-228ENST00000523517 MT1GP13640 62 aa5.78□□□□□ -1.48
IKBKB-228ENST00000523517 FCGBPQ9Y6R7 5405 aaPredicted RBP5.74□□□□□ -1.49
IKBKB-228ENST00000523517 MUC12Q9UKN1 5478 aa5.67□□□□□ -1.5
IKBKB-228ENST00000523517 CRCT1Q9UGL9 99 aa5.62□□□□□ -1.51
IKBKB-228ENST00000523517 LCE5AQ5TCM9 118 aa5.58□□□□□ -1.52
IKBKB-228ENST00000523517 SPRR2FQ96RM1 72 aa5.55□□□□□ -1.52
IKBKB-228ENST00000523517 DSTQ03001 7570 aaKnown RBP5.44□□□□□ -1.54
IKBKB-228ENST00000523517 MACF1Q9UPN3 7388 aaKnown RBP5.42□□□□□ -1.54
IKBKB-228ENST00000523517 KRTAP12-4P60329 112 aa5.41□□□□□ -1.54
IKBKB-228ENST00000523517 LCE3BQ5TA77 95 aa5.34□□□□□ -1.56
IKBKB-228ENST00000523517 KRTAP6-1Q3LI64 71 aa5.25□□□□□ -1.57
IKBKB-228ENST00000523517 KRTAP4-9Q9BYQ8 210 aa5.22□□□□□ -1.57
IKBKB-228ENST00000523517 MT1AP04731 61 aa5.22□□□□□ -1.57
IKBKB-228ENST00000523517 LCE1AQ5T7P2 110 aa5.18□□□□□ -1.58
IKBKB-228ENST00000523517 SYNE2Q8WXH0 6885 aaKnown RBP5.18□□□□□ -1.58
IKBKB-228ENST00000523517 KRTAP5-9P26371 169 aa5.15□□□□□ -1.59
IKBKB-228ENST00000523517 MDN1Q9NU22 5596 aa5.14□□□□□ -1.59
IKBKB-228ENST00000523517 SYNE1Q8NF91 8797 aaKnown RBP5.12□□□□□ -1.59
IKBKB-228ENST00000523517 KRTAP5-5Q701N2 237 aaPredicted RBP5.11□□□□□ -1.59
IKBKB-228ENST00000523517 LCE3DQ9BYE3 92 aa5.06□□□□□ -1.6
IKBKB-228ENST00000523517 KRTAP9-2Q9BYQ4 174 aa5.05□□□□□ -1.6
IKBKB-228ENST00000523517 SPRR2EP22531 72 aa5.04□□□□□ -1.6
IKBKB-228ENST00000523517 SPRR2BP35325 72 aa5.04□□□□□ -1.6
IKBKB-228ENST00000523517 SPRR2AP35326 72 aa5.04□□□□□ -1.6
IKBKB-228ENST00000523517 LCE3EQ5T5B0 92 aa5□□□□□ -1.61
IKBKB-228ENST00000523517 KRTAP9-6A0A140TA67 174 aa4.98□□□□□ -1.61
IKBKB-228ENST00000523517 KRTAP9-4Q9BYQ2 154 aa4.91□□□□□ -1.62
IKBKB-228ENST00000523517 KRTAP9-7A8MTY7 169 aa4.84□□□□□ -1.64
IKBKB-228ENST00000523517 SPRR2DP22532 72 aa4.82□□□□□ -1.64
IKBKB-228ENST00000523517 PRM1P04553 51 aa4.78□□□□□ -1.64
IKBKB-228ENST00000523517 KRTAP6-2Q3LI66 62 aa4.7□□□□□ -1.66
IKBKB-228ENST00000523517 KRTAP6-3Q3LI67 103 aa4.68□□□□□ -1.66
IKBKB-228ENST00000523517 MT3P25713 68 aa4.68□□□□□ -1.66
IKBKB-228ENST00000523517 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.59□□□□□ -1.67
IKBKB-228ENST00000523517 KRTAP5-4Q6L8H1 288 aa4.48□□□□□ -1.69
IKBKB-228ENST00000523517 OBSCNQ5VST9 7968 aa4.44□□□□□ -1.7
IKBKB-228ENST00000523517 NEBP20929 6669 aa4.36□□□□□ -1.71
IKBKB-228ENST00000523517 KRTAP4-6Q9BYQ5 205 aa4.29□□□□□ -1.72
IKBKB-228ENST00000523517 MT4P47944 62 aa4.24□□□□□ -1.73
IKBKB-228ENST00000523517 KRTAP9-9Q9BYP9 154 aa4.22□□□□□ -1.73
IKBKB-228ENST00000523517 KRTAP2-2Q9BYT5 123 aa4.21□□□□□ -1.74
IKBKB-228ENST00000523517 KRTAP20-2Q3LI61 65 aa4.2□□□□□ -1.74
IKBKB-228ENST00000523517 KRTAP5-2Q701N4 177 aa4.2□□□□□ -1.74
IKBKB-228ENST00000523517 LCE4AQ5TA78 99 aa4.18□□□□□ -1.74
IKBKB-228ENST00000523517 HMCN1Q96RW7 5635 aa4.01□□□□□ -1.77
IKBKB-228ENST00000523517 KRTAP5-3Q6L8H2 238 aa4□□□□□ -1.77
IKBKB-228ENST00000523517 LCE1DQ5T752 114 aa3.98□□□□□ -1.77
IKBKB-228ENST00000523517 KRTAP20-1Q3LI63 56 aa3.96□□□□□ -1.78
IKBKB-228ENST00000523517 MUC5ACP98088 5654 aa3.91□□□□□ -1.78
IKBKB-228ENST00000523517 LCE1FQ5T754 118 aa3.88□□□□□ -1.79
IKBKB-228ENST00000523517 LCE1EQ5T753 118 aa3.82□□□□□ -1.8
IKBKB-228ENST00000523517 LCE1BQ5T7P3 118 aa3.76□□□□□ -1.81
IKBKB-228ENST00000523517 KRTAP5-10Q6L8G5 202 aa3.7□□□□□ -1.82
IKBKB-228ENST00000523517 KRTAP5-1Q6L8H4 278 aa3.66□□□□□ -1.82
IKBKB-228ENST00000523517 KRTAP4-2Q9BYR5 136 aa3.62□□□□□ -1.83
IKBKB-228ENST00000523517 LCE1CQ5T751 118 aa3.61□□□□□ -1.83
IKBKB-228ENST00000523517 KRTAP4-11Q9BYQ6 195 aa3.6□□□□□ -1.83
IKBKB-228ENST00000523517 GPR98Q8WXG9 6306 aa3.59□□□□□ -1.83
IKBKB-228ENST00000523517 KRTAP4-12Q9BQ66 201 aa3.56□□□□□ -1.84
IKBKB-228ENST00000523517 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.41□□□□□ -1.86
IKBKB-228ENST00000523517 KRTAP21-2Q3LI59 83 aa3.4□□□□□ -1.87
IKBKB-228ENST00000523517 KRTAP5-8O75690 187 aa3.31□□□□□ -1.88
IKBKB-228ENST00000523517 KRTAP5-7Q6L8G8 165 aa3.28□□□□□ -1.88
IKBKB-228ENST00000523517 AHNAK2Q8IVF2 5795 aa3.16□□□□□ -1.9
IKBKB-228ENST00000523517 KRTAP5-11Q6L8G4 156 aa3.09□□□□□ -1.91
IKBKB-228ENST00000523517 KRTAP4-4Q9BYR3 166 aa3.08□□□□□ -1.92
IKBKB-228ENST00000523517 KRTAP21-1Q3LI58 79 aa3.02□□□□□ -1.93
IKBKB-228ENST00000523517 MUC5BQ9HC84 5762 aaPredicted RBP2.88□□□□□ -1.95
IKBKB-228ENST00000523517 AHNAKQ09666 5890 aaKnown RBP2.86□□□□□ -1.95
IKBKB-228ENST00000523517 MUC19Q7Z5P9 8384 aa2.84□□□□□ -1.95
IKBKB-228ENST00000523517 PHGR1C9JFL3 82 aa2.68□□□□□ -1.98
IKBKB-228ENST00000523517 MUC16Q8WXI7 14507 aa1.81□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 98.4 ms