RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 KRTAP9-6A8MVA2 160 aa8.87□□□□□ -0.99
COL13A1-214ENST00000522165 MUC12Q9UKN1 5478 aa8.79□□□□□ -1
COL13A1-214ENST00000522165 KRTAP19-3Q7Z4W3 81 aa8.79□□□□□ -1
COL13A1-214ENST00000522165 MACF1Q9UPN3 7388 aaKnown RBP8.75□□□□□ -1.01
COL13A1-214ENST00000522165 SPRR2FQ96RM1 72 aa8.75□□□□□ -1.01
COL13A1-214ENST00000522165 MT1GP13640 62 aa8.73□□□□□ -1.01
COL13A1-214ENST00000522165 INE1O15225 51 aa8.72□□□□□ -1.01
COL13A1-214ENST00000522165 MT1MQ8N339 61 aa8.68□□□□□ -1.02
COL13A1-214ENST00000522165 KRTAP4-3Q9BYR4 195 aa8.61□□□□□ -1.03
COL13A1-214ENST00000522165 LCE5AQ5TCM9 118 aa8.58□□□□□ -1.04
COL13A1-214ENST00000522165 SYNE2Q8WXH0 6885 aaKnown RBP8.51□□□□□ -1.05
COL13A1-214ENST00000522165 KRTAP5-9P26371 169 aa8.47□□□□□ -1.05
COL13A1-214ENST00000522165 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.44□□□□□ -1.06
COL13A1-214ENST00000522165 LOC100996750A0A140TA64 210 aa8.41□□□□□ -1.06
COL13A1-214ENST00000522165 KRTAP2-3P0C7H8 128 aa8.35□□□□□ -1.07
COL13A1-214ENST00000522165 KRTAP2-4Q9BYR9 128 aa8.35□□□□□ -1.07
COL13A1-214ENST00000522165 KRTAP2-1Q9BYU5 128 aa8.35□□□□□ -1.07
COL13A1-214ENST00000522165 LCE1AQ5T7P2 110 aa8.31□□□□□ -1.08
COL13A1-214ENST00000522165 MDN1Q9NU22 5596 aa8.28□□□□□ -1.08
COL13A1-214ENST00000522165 SPRR2EP22531 72 aa8.17□□□□□ -1.1
COL13A1-214ENST00000522165 SPRR2BP35325 72 aa8.17□□□□□ -1.1
COL13A1-214ENST00000522165 SPRR2AP35326 72 aa8.17□□□□□ -1.1
COL13A1-214ENST00000522165 DSTQ03001 7570 aaKnown RBP8.1□□□□□ -1.11
COL13A1-214ENST00000522165 KRTAP9-7A8MTY7 169 aa8.1□□□□□ -1.11
COL13A1-214ENST00000522165 KRTAP6-3Q3LI67 103 aa8.09□□□□□ -1.11
COL13A1-214ENST00000522165 SPRR2DP22532 72 aa7.85□□□□□ -1.15
COL13A1-214ENST00000522165 KRTAP5-5Q701N2 237 aaPredicted RBP7.79□□□□□ -1.16
COL13A1-214ENST00000522165 MT1AP04731 61 aa7.74□□□□□ -1.17
COL13A1-214ENST00000522165 KRTAP6-1Q3LI64 71 aa7.72□□□□□ -1.17
COL13A1-214ENST00000522165 NEBP20929 6669 aa7.71□□□□□ -1.17
COL13A1-214ENST00000522165 LCE3BQ5TA77 95 aa7.61□□□□□ -1.19
COL13A1-214ENST00000522165 SYNE1Q8NF91 8797 aaKnown RBP7.38□□□□□ -1.23
COL13A1-214ENST00000522165 KRTAP9-4Q9BYQ2 154 aa7.32□□□□□ -1.24
COL13A1-214ENST00000522165 KRTAP4-9Q9BYQ8 210 aa7.31□□□□□ -1.24
COL13A1-214ENST00000522165 KRTAP5-4Q6L8H1 288 aa7.2□□□□□ -1.26
COL13A1-214ENST00000522165 KRTAP12-4P60329 112 aa7.18□□□□□ -1.26
COL13A1-214ENST00000522165 KRTAP20-1Q3LI63 56 aa7.13□□□□□ -1.27
COL13A1-214ENST00000522165 LCE3DQ9BYE3 92 aa7.04□□□□□ -1.28
COL13A1-214ENST00000522165 KRTAP6-2Q3LI66 62 aa7.02□□□□□ -1.29
COL13A1-214ENST00000522165 MT3P25713 68 aa6.97□□□□□ -1.29
COL13A1-214ENST00000522165 KRTAP2-2Q9BYT5 123 aa6.97□□□□□ -1.29
COL13A1-214ENST00000522165 LCE4AQ5TA78 99 aa6.91□□□□□ -1.3
COL13A1-214ENST00000522165 LCE3EQ5T5B0 92 aa6.89□□□□□ -1.31
COL13A1-214ENST00000522165 KRTAP4-6Q9BYQ5 205 aa6.86□□□□□ -1.31
COL13A1-214ENST00000522165 MT4P47944 62 aa6.84□□□□□ -1.31
COL13A1-214ENST00000522165 KRTAP20-2Q3LI61 65 aa6.72□□□□□ -1.33
COL13A1-214ENST00000522165 LCE1DQ5T752 114 aa6.62□□□□□ -1.35
COL13A1-214ENST00000522165 KRTAP5-2Q701N4 177 aa6.61□□□□□ -1.35
COL13A1-214ENST00000522165 HMCN1Q96RW7 5635 aa6.61□□□□□ -1.35
COL13A1-214ENST00000522165 KRTAP5-3Q6L8H2 238 aa6.46□□□□□ -1.38
COL13A1-214ENST00000522165 OBSCNQ5VST9 7968 aa6.42□□□□□ -1.38
COL13A1-214ENST00000522165 PRM1P04553 51 aa6.26□□□□□ -1.41
COL13A1-214ENST00000522165 LCE1EQ5T753 118 aa5.93□□□□□ -1.46
COL13A1-214ENST00000522165 AHNAK2Q8IVF2 5795 aa5.82□□□□□ -1.48
COL13A1-214ENST00000522165 MUC5ACP98088 5654 aa5.74□□□□□ -1.49
COL13A1-214ENST00000522165 KRTAP4-11Q9BYQ6 195 aa5.71□□□□□ -1.49
COL13A1-214ENST00000522165 KRTAP5-1Q6L8H4 278 aa5.67□□□□□ -1.5
COL13A1-214ENST00000522165 LCE1BQ5T7P3 118 aa5.64□□□□□ -1.51
COL13A1-214ENST00000522165 KRTAP5-10Q6L8G5 202 aa5.62□□□□□ -1.51
COL13A1-214ENST00000522165 KRTAP4-2Q9BYR5 136 aa5.56□□□□□ -1.52
COL13A1-214ENST00000522165 GPR98Q8WXG9 6306 aa5.56□□□□□ -1.52
COL13A1-214ENST00000522165 LCE1CQ5T751 118 aa5.55□□□□□ -1.52
COL13A1-214ENST00000522165 KRTAP5-8O75690 187 aa5.49□□□□□ -1.53
COL13A1-214ENST00000522165 KRTAP5-7Q6L8G8 165 aa5.38□□□□□ -1.55
COL13A1-214ENST00000522165 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.23□□□□□ -1.57
COL13A1-214ENST00000522165 KRTAP21-2Q3LI59 83 aa5.03□□□□□ -1.6
COL13A1-214ENST00000522165 KRTAP9-9Q9BYP9 154 aa4.85□□□□□ -1.63
COL13A1-214ENST00000522165 KRTAP5-11Q6L8G4 156 aa4.85□□□□□ -1.63
COL13A1-214ENST00000522165 MUC5BQ9HC84 5762 aaPredicted RBP4.73□□□□□ -1.65
COL13A1-214ENST00000522165 KRTAP4-12Q9BQ66 201 aa4.54□□□□□ -1.68
COL13A1-214ENST00000522165 KRTAP4-4Q9BYR3 166 aa4.5□□□□□ -1.69
COL13A1-214ENST00000522165 AHNAKQ09666 5890 aaKnown RBP4.5□□□□□ -1.69
COL13A1-214ENST00000522165 LCE1FQ5T754 118 aa4.21□□□□□ -1.74
COL13A1-214ENST00000522165 PHGR1C9JFL3 82 aa4.17□□□□□ -1.74
COL13A1-214ENST00000522165 KRTAP21-1Q3LI58 79 aa3.99□□□□□ -1.77
COL13A1-214ENST00000522165 MUC19Q7Z5P9 8384 aa3.81□□□□□ -1.8
COL13A1-214ENST00000522165 MUC16Q8WXI7 14507 aa2.75□□□□□ -1.97
Retrieved 77 of 20,778 RNA–protein pairs in 12.1 ms