RNA–Protein interactions for RNA: ENST00000521261.1

MCM4-213, Transcript of minichromosome maintenance complex component 4, humanhuman

TSL 2

Gene MCM4, Length 1,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4-213ENST00000521261 PRR15LQ9BU68 103 aa1.92□□□□□ -2.1
MCM4-213ENST00000521261 KRTAP19-6Q3LI70 58 aa1.91□□□□□ -2.1
MCM4-213ENST00000521261 S4R3F8 94 aa1.91□□□□□ -2.1
MCM4-213ENST00000521261 A0A1B0GU69 56 aa1.9□□□□□ -2.11
MCM4-213ENST00000521261 CSAG1Q6PB30 78 aa1.89□□□□□ -2.11
MCM4-213ENST00000521261 Q5VV11 94 aa1.88□□□□□ -2.11
MCM4-213ENST00000521261 LCA10Q71F78 164 aa1.88□□□□□ -2.11
MCM4-213ENST00000521261 USH2AO75445 5202 aa1.87□□□□□ -2.11
MCM4-213ENST00000521261 UQCR11O14957 56 aa1.86□□□□□ -2.11
MCM4-213ENST00000521261 SSPOA2VEC9 5147 aa1.86□□□□□ -2.11
MCM4-213ENST00000521261 FCGBPQ9Y6R7 5405 aaPredicted RBP1.85□□□□□ -2.11
MCM4-213ENST00000521261 A6NN06 94 aa1.85□□□□□ -2.11
MCM4-213ENST00000521261 H0YAA0 97 aa1.85□□□□□ -2.11
MCM4-213ENST00000521261 MACF1Q9UPN3 7388 aaKnown RBP1.84□□□□□ -2.11
MCM4-213ENST00000521261 BRK1Q8WUW1 75 aa1.84□□□□□ -2.12
MCM4-213ENST00000521261 CDC42SE1Q9NRR8 79 aa1.84□□□□□ -2.12
MCM4-213ENST00000521261 CRIPTQ9P021 101 aa1.84□□□□□ -2.12
MCM4-213ENST00000521261 MIR22HGQ0VDD5 57 aa1.82□□□□□ -2.12
MCM4-213ENST00000521261 SPATA8Q6RVD6 105 aa1.82□□□□□ -2.12
MCM4-213ENST00000521261 SPRR2GQ9BYE4 73 aa1.82□□□□□ -2.12
MCM4-213ENST00000521261 KRTAP12-4P60329 112 aa1.81□□□□□ -2.12
MCM4-213ENST00000521261 M0QZ58 72 aa1.8□□□□□ -2.12
MCM4-213ENST00000521261 KRTAP19-8Q3LI54 63 aa1.8□□□□□ -2.12
MCM4-213ENST00000521261 MT1BP07438 61 aa1.79□□□□□ -2.12
MCM4-213ENST00000521261 KRTAP12-1P59990 96 aa1.78□□□□□ -2.12
MCM4-213ENST00000521261 PRO2289Q9P1D8 64 aa1.78□□□□□ -2.12
MCM4-213ENST00000521261 SYNE2Q8WXH0 6885 aaKnown RBP1.77□□□□□ -2.13
MCM4-213ENST00000521261 PLAC4Q8WY50 150 aa1.76□□□□□ -2.13
MCM4-213ENST00000521261 PMAIP1Q13794 54 aa1.75□□□□□ -2.13
MCM4-213ENST00000521261 KRTAP20-1Q3LI63 56 aa1.75□□□□□ -2.13
MCM4-213ENST00000521261 KRTAP13-4Q3LI77 160 aa1.73□□□□□ -2.13
MCM4-213ENST00000521261 A0A0D9SG42 100 aa1.71□□□□□ -2.14
MCM4-213ENST00000521261 KRTAP21-2Q3LI59 83 aa1.71□□□□□ -2.14
MCM4-213ENST00000521261 KRTAP2-3P0C7H8 128 aa1.7□□□□□ -2.14
MCM4-213ENST00000521261 KRTAP2-4Q9BYR9 128 aa1.7□□□□□ -2.14
MCM4-213ENST00000521261 KTN1-AS1Q86SY8 53 aa1.69□□□□□ -2.14
MCM4-213ENST00000521261 KRTAP8-1Q8IUC2 63 aa1.69□□□□□ -2.14
MCM4-213ENST00000521261 SPRR2FQ96RM1 72 aa1.69□□□□□ -2.14
MCM4-213ENST00000521261 SPRR2EP22531 72 aa1.68□□□□□ -2.14
MCM4-213ENST00000521261 SPRR2BP35325 72 aa1.68□□□□□ -2.14
MCM4-213ENST00000521261 SPRR2AP35326 72 aa1.68□□□□□ -2.14
MCM4-213ENST00000521261 LINC01554Q52M75 96 aa1.68□□□□□ -2.14
MCM4-213ENST00000521261 MUC12Q9UKN1 5478 aa1.68□□□□□ -2.14
MCM4-213ENST00000521261 ROMO1P60602 79 aa1.66□□□□□ -2.14
MCM4-213ENST00000521261 MT1XP80297 61 aa1.66□□□□□ -2.14
MCM4-213ENST00000521261 KRTAP2-1Q9BYU5 128 aa1.66□□□□□ -2.14
MCM4-213ENST00000521261 NEBP20929 6669 aa1.64□□□□□ -2.15
MCM4-213ENST00000521261 SPRR2DP22532 72 aa1.63□□□□□ -2.15
MCM4-213ENST00000521261 KMT2DO14686 5537 aa1.62□□□□□ -2.15
MCM4-213ENST00000521261 MDN1Q9NU22 5596 aa1.6□□□□□ -2.15
MCM4-213ENST00000521261 TNP1P09430 55 aa1.59□□□□□ -2.16
MCM4-213ENST00000521261 C10orf95Q9H7T3 257 aa1.59□□□□□ -2.16
MCM4-213ENST00000521261 HMCN1Q96RW7 5635 aa1.57□□□□□ -2.16
MCM4-213ENST00000521261 KRTAP19-3Q7Z4W3 81 aa1.5□□□□□ -2.17
MCM4-213ENST00000521261 MT1EP04732 61 aa1.49□□□□□ -2.17
MCM4-213ENST00000521261 MT1GP13640 62 aa1.49□□□□□ -2.17
MCM4-213ENST00000521261 KRTAP19-7Q3SYF9 63 aa1.48□□□□□ -2.17
MCM4-213ENST00000521261 DSTQ03001 7570 aaKnown RBP1.47□□□□□ -2.17
MCM4-213ENST00000521261 KRTAP19-5Q3LI72 72 aa1.45□□□□□ -2.18
MCM4-213ENST00000521261 GPR98Q8WXG9 6306 aa1.45□□□□□ -2.18
MCM4-213ENST00000521261 MT1MQ8N339 61 aa1.42□□□□□ -2.18
MCM4-213ENST00000521261 MT4P47944 62 aa1.41□□□□□ -2.18
MCM4-213ENST00000521261 MT1LQ93083 61 aa1.41□□□□□ -2.18
MCM4-213ENST00000521261 KRTAP5-10Q6L8G5 202 aa1.34□□□□□ -2.2
MCM4-213ENST00000521261 KRTAP20-2Q3LI61 65 aa1.31□□□□□ -2.2
MCM4-213ENST00000521261 AHNAK2Q8IVF2 5795 aa1.3□□□□□ -2.2
MCM4-213ENST00000521261 SYNE1Q8NF91 8797 aaKnown RBP1.25□□□□□ -2.21
MCM4-213ENST00000521261 MT1AP04731 61 aa1.21□□□□□ -2.22
MCM4-213ENST00000521261 KRTAP6-1Q3LI64 71 aa1.19□□□□□ -2.22
MCM4-213ENST00000521261 AHNAKQ09666 5890 aaKnown RBP1.17□□□□□ -2.22
MCM4-213ENST00000521261 KRTAP6-2Q3LI66 62 aa1.15□□□□□ -2.22
MCM4-213ENST00000521261 INE1O15225 51 aa1.14□□□□□ -2.23
MCM4-213ENST00000521261 MUC5BQ9HC84 5762 aaPredicted RBP1.09□□□□□ -2.24
MCM4-213ENST00000521261 MUC5ACP98088 5654 aa1.06□□□□□ -2.24
MCM4-213ENST00000521261 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
MCM4-213ENST00000521261 PRM1P04553 51 aa0.85□□□□□ -2.27
MCM4-213ENST00000521261 PHGR1C9JFL3 82 aa0.81□□□□□ -2.28
MCM4-213ENST00000521261 KRTAP21-1Q3LI58 79 aa0.63□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 151.7 ms