RNA–Protein interactions for RNA: ENST00000520746.1

HDAC2-208, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-208ENST00000520746 Q1T7F1 81 aa1.27□□□□□ -2.21
HDAC2-208ENST00000520746 SPTSSBQ8NFR3 76 aa1.27□□□□□ -2.21
HDAC2-208ENST00000520746 MRPL34Q9BQ48 92 aaKnown RBP1.27□□□□□ -2.21
HDAC2-208ENST00000520746 CYP4F30PQ9H0H9 118 aa1.27□□□□□ -2.21
HDAC2-208ENST00000520746 MACF1Q9UPN3 7388 aaKnown RBP1.27□□□□□ -2.21
HDAC2-208ENST00000520746 SYNE2Q8WXH0 6885 aaKnown RBP1.27□□□□□ -2.21
HDAC2-208ENST00000520746 ACYP2P14621 99 aa1.26□□□□□ -2.21
HDAC2-208ENST00000520746 H1FX-AS1Q4G0G2 97 aa1.26□□□□□ -2.21
HDAC2-208ENST00000520746 COA5Q86WW8 74 aa1.26□□□□□ -2.21
HDAC2-208ENST00000520746 A8MUN3 132 aa1.25□□□□□ -2.21
HDAC2-208ENST00000520746 KRTAP2-3P0C7H8 128 aa1.25□□□□□ -2.21
HDAC2-208ENST00000520746 KRTAP2-4Q9BYR9 128 aa1.25□□□□□ -2.21
HDAC2-208ENST00000520746 LINC00472Q9H8W2 130 aa1.25□□□□□ -2.21
HDAC2-208ENST00000520746 FLGP20930 4061 aaPredicted RBP1.25□□□□□ -2.21
HDAC2-208ENST00000520746 MMP24-AS1A0A0U1RRL7 71 aa1.24□□□□□ -2.21
HDAC2-208ENST00000520746 A0A1B0GU69 56 aa1.24□□□□□ -2.21
HDAC2-208ENST00000520746 Q5VV11 94 aa1.24□□□□□ -2.21
HDAC2-208ENST00000520746 PRO2289Q9P1D8 64 aa1.24□□□□□ -2.21
HDAC2-208ENST00000520746 C7orf65Q6ZTY9 151 aa1.23□□□□□ -2.21
HDAC2-208ENST00000520746 SPRR2EP22531 72 aa1.22□□□□□ -2.21
HDAC2-208ENST00000520746 SPRR2BP35325 72 aa1.22□□□□□ -2.21
HDAC2-208ENST00000520746 SPRR2AP35326 72 aa1.22□□□□□ -2.21
HDAC2-208ENST00000520746 CDC42SE1Q9NRR8 79 aa1.22□□□□□ -2.21
HDAC2-208ENST00000520746 UQCR11O14957 56 aa1.21□□□□□ -2.22
HDAC2-208ENST00000520746 CSAG1Q6PB30 78 aa1.21□□□□□ -2.22
HDAC2-208ENST00000520746 KTN1-AS1Q86SY8 53 aa1.21□□□□□ -2.22
HDAC2-208ENST00000520746 SPRR2FQ96RM1 72 aa1.21□□□□□ -2.22
HDAC2-208ENST00000520746 LINC01558Q9Y6Z2 57 aa1.21□□□□□ -2.22
HDAC2-208ENST00000520746 MIR22HGQ0VDD5 57 aa1.2□□□□□ -2.22
HDAC2-208ENST00000520746 KRTAP2-1Q9BYU5 128 aa1.2□□□□□ -2.22
HDAC2-208ENST00000520746 SPRR2DP22532 72 aa1.19□□□□□ -2.22
HDAC2-208ENST00000520746 LCA10Q71F78 164 aa1.19□□□□□ -2.22
HDAC2-208ENST00000520746 DMAC1Q96GE9 116 aa1.19□□□□□ -2.22
HDAC2-208ENST00000520746 S4R3F8 94 aa1.19□□□□□ -2.22
HDAC2-208ENST00000520746 NEBP20929 6669 aa1.18□□□□□ -2.22
HDAC2-208ENST00000520746 MT1BP07438 61 aa1.18□□□□□ -2.22
HDAC2-208ENST00000520746 KRTAP8-1Q8IUC2 63 aa1.18□□□□□ -2.22
HDAC2-208ENST00000520746 KMT2DO14686 5537 aa1.18□□□□□ -2.22
HDAC2-208ENST00000520746 KRTAP19-8Q3LI54 63 aa1.17□□□□□ -2.22
HDAC2-208ENST00000520746 PLAC4Q8WY50 150 aa1.17□□□□□ -2.22
HDAC2-208ENST00000520746 SPRR2GQ9BYE4 73 aa1.16□□□□□ -2.22
HDAC2-208ENST00000520746 SPATA8Q6RVD6 105 aa1.15□□□□□ -2.23
HDAC2-208ENST00000520746 CRIPTQ9P021 101 aa1.15□□□□□ -2.23
HDAC2-208ENST00000520746 MDN1Q9NU22 5596 aa1.14□□□□□ -2.23
HDAC2-208ENST00000520746 MUC12Q9UKN1 5478 aa1.13□□□□□ -2.23
HDAC2-208ENST00000520746 LINC01554Q52M75 96 aa1.12□□□□□ -2.23
HDAC2-208ENST00000520746 A0A0D9SG42 100 aa1.09□□□□□ -2.23
HDAC2-208ENST00000520746 M0QZ58 72 aa1.09□□□□□ -2.23
HDAC2-208ENST00000520746 ROMO1P60602 79 aa1.09□□□□□ -2.23
HDAC2-208ENST00000520746 MT1XP80297 61 aa1.09□□□□□ -2.23
HDAC2-208ENST00000520746 H0YAA0 97 aa1.07□□□□□ -2.24
HDAC2-208ENST00000520746 GPR98Q8WXG9 6306 aa1.06□□□□□ -2.24
HDAC2-208ENST00000520746 MT4P47944 62 aa1.05□□□□□ -2.24
HDAC2-208ENST00000520746 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
HDAC2-208ENST00000520746 DSTQ03001 7570 aaKnown RBP1.01□□□□□ -2.25
HDAC2-208ENST00000520746 KRTAP5-10Q6L8G5 202 aa1□□□□□ -2.25
HDAC2-208ENST00000520746 KRTAP19-3Q7Z4W3 81 aa0.99□□□□□ -2.25
HDAC2-208ENST00000520746 MT1GP13640 62 aa0.98□□□□□ -2.25
HDAC2-208ENST00000520746 C10orf95Q9H7T3 257 aa0.98□□□□□ -2.25
HDAC2-208ENST00000520746 MT1EP04732 61 aa0.97□□□□□ -2.25
HDAC2-208ENST00000520746 TNP1P09430 55 aa0.97□□□□□ -2.25
HDAC2-208ENST00000520746 KRTAP19-5Q3LI72 72 aa0.96□□□□□ -2.26
HDAC2-208ENST00000520746 KRTAP19-7Q3SYF9 63 aa0.96□□□□□ -2.26
HDAC2-208ENST00000520746 AHNAK2Q8IVF2 5795 aa0.95□□□□□ -2.26
HDAC2-208ENST00000520746 MT1MQ8N339 61 aa0.94□□□□□ -2.26
HDAC2-208ENST00000520746 INE1O15225 51 aa0.92□□□□□ -2.26
HDAC2-208ENST00000520746 KRTAP20-2Q3LI61 65 aa0.91□□□□□ -2.26
HDAC2-208ENST00000520746 MT1LQ93083 61 aa0.91□□□□□ -2.26
HDAC2-208ENST00000520746 AHNAKQ09666 5890 aaKnown RBP0.84□□□□□ -2.27
HDAC2-208ENST00000520746 MUC5ACP98088 5654 aa0.83□□□□□ -2.28
HDAC2-208ENST00000520746 SYNE1Q8NF91 8797 aaKnown RBP0.8□□□□□ -2.28
HDAC2-208ENST00000520746 KRTAP6-1Q3LI64 71 aa0.79□□□□□ -2.28
HDAC2-208ENST00000520746 KRTAP6-2Q3LI66 62 aa0.79□□□□□ -2.28
HDAC2-208ENST00000520746 MUC5BQ9HC84 5762 aaPredicted RBP0.79□□□□□ -2.28
HDAC2-208ENST00000520746 MT1AP04731 61 aa0.78□□□□□ -2.28
HDAC2-208ENST00000520746 PHGR1C9JFL3 82 aa0.62□□□□□ -2.31
HDAC2-208ENST00000520746 PRM1P04553 51 aa0.56□□□□□ -2.32
HDAC2-208ENST00000520746 KRTAP21-1Q3LI58 79 aa0.47□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 10.6 ms