RNA–Protein interactions for RNA: ENST00000520700.1

TRAM1-203, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-203ENST00000520700 KRTAP19-3Q7Z4W3 81 aa6.3□□□□□ -1.4
TRAM1-203ENST00000520700 KRTAP12-3P60328 96 aa6.29□□□□□ -1.4
TRAM1-203ENST00000520700 LCE5AQ5TCM9 118 aa6.28□□□□□ -1.4
TRAM1-203ENST00000520700 PP632Q6XCG6 107 aa6.25□□□□□ -1.41
TRAM1-203ENST00000520700 SPRR2DP22532 72 aa6.24□□□□□ -1.41
TRAM1-203ENST00000520700 MT1GP13640 62 aa6.23□□□□□ -1.41
TRAM1-203ENST00000520700 MT1LQ93083 61 aa6.23□□□□□ -1.41
TRAM1-203ENST00000520700 KRTAP2-3P0C7H8 128 aa6.2□□□□□ -1.42
TRAM1-203ENST00000520700 KRTAP2-4Q9BYR9 128 aa6.2□□□□□ -1.42
TRAM1-203ENST00000520700 KRTAP20-1Q3LI63 56 aa6.19□□□□□ -1.42
TRAM1-203ENST00000520700 LCE3BQ5TA77 95 aa6.16□□□□□ -1.42
TRAM1-203ENST00000520700 KRTAP4-12Q9BQ66 201 aa6.16□□□□□ -1.42
TRAM1-203ENST00000520700 KRTAP9-9Q9BYP9 154 aa6.11□□□□□ -1.43
TRAM1-203ENST00000520700 KRTAP9-4Q9BYQ2 154 aa6.11□□□□□ -1.43
TRAM1-203ENST00000520700 PMAIP1Q13794 54 aa6.1□□□□□ -1.43
TRAM1-203ENST00000520700 KRTAP19-4Q3LI73 84 aa6.1□□□□□ -1.43
TRAM1-203ENST00000520700 MT1MQ8N339 61 aa6.09□□□□□ -1.43
TRAM1-203ENST00000520700 PRO0628Q9UI54 55 aa6.06□□□□□ -1.44
TRAM1-203ENST00000520700 KRTAP15-1Q3LI76 137 aa6.04□□□□□ -1.44
TRAM1-203ENST00000520700 KRTAP2-2Q9BYT5 123 aa6.03□□□□□ -1.44
TRAM1-203ENST00000520700 KRTAP2-1Q9BYU5 128 aa6.03□□□□□ -1.44
TRAM1-203ENST00000520700 DSTQ03001 7570 aaKnown RBP5.98□□□□□ -1.45
TRAM1-203ENST00000520700 KRTAP4-7Q9BYR0 210 aa5.89□□□□□ -1.47
TRAM1-203ENST00000520700 KRTAP4-3Q9BYR4 195 aa5.88□□□□□ -1.47
TRAM1-203ENST00000520700 LCE3CQ5T5A8 94 aa5.85□□□□□ -1.47
TRAM1-203ENST00000520700 LCE1DQ5T752 114 aa5.77□□□□□ -1.49
TRAM1-203ENST00000520700 H3BS24 57 aa5.71□□□□□ -1.5
TRAM1-203ENST00000520700 PRAC1Q96KF2 57 aa5.71□□□□□ -1.5
TRAM1-203ENST00000520700 KTN1-AS1Q86SY8 53 aa5.67□□□□□ -1.5
TRAM1-203ENST00000520700 KRTAP4-9Q9BYQ8 210 aa5.65□□□□□ -1.5
TRAM1-203ENST00000520700 KRTAP4-2Q9BYR5 136 aa5.62□□□□□ -1.51
TRAM1-203ENST00000520700 LCE4AQ5TA78 99 aa5.61□□□□□ -1.51
TRAM1-203ENST00000520700 KRTAP5-4Q6L8H1 288 aa5.6□□□□□ -1.51
TRAM1-203ENST00000520700 KRTAP5-5Q701N2 237 aaPredicted RBP5.58□□□□□ -1.52
TRAM1-203ENST00000520700 KRTAP9-6A8MVA2 160 aa5.49□□□□□ -1.53
TRAM1-203ENST00000520700 KRTAP4-11Q9BYQ6 195 aa5.42□□□□□ -1.54
TRAM1-203ENST00000520700 HMCN1Q96RW7 5635 aa5.4□□□□□ -1.55
TRAM1-203ENST00000520700 MT4P47944 62 aa5.39□□□□□ -1.55
TRAM1-203ENST00000520700 SPRR5A0A1B0GTR4 108 aa5.32□□□□□ -1.56
TRAM1-203ENST00000520700 MT1AP04731 61 aa5.32□□□□□ -1.56
TRAM1-203ENST00000520700 SYNE1Q8NF91 8797 aaKnown RBP5.31□□□□□ -1.56
TRAM1-203ENST00000520700 KRTAP12-4P60329 112 aa5.31□□□□□ -1.56
TRAM1-203ENST00000520700 SVIPQ8NHG7 77 aa5.28□□□□□ -1.56
TRAM1-203ENST00000520700 KRTAP6-1Q3LI64 71 aa5.23□□□□□ -1.57
TRAM1-203ENST00000520700 KRTAP20-2Q3LI61 65 aa5.21□□□□□ -1.58
TRAM1-203ENST00000520700 KRTAP5-3Q6L8H2 238 aa5.17□□□□□ -1.58
TRAM1-203ENST00000520700 AHNAK2Q8IVF2 5795 aa5.05□□□□□ -1.6
TRAM1-203ENST00000520700 GPR98Q8WXG9 6306 aa5.03□□□□□ -1.6
TRAM1-203ENST00000520700 KRTAP5-2Q701N4 177 aa4.98□□□□□ -1.61
TRAM1-203ENST00000520700 KRTAP6-2Q3LI66 62 aa4.9□□□□□ -1.63
TRAM1-203ENST00000520700 MT3P25713 68 aa4.86□□□□□ -1.63
TRAM1-203ENST00000520700 KRTAP5-10Q6L8G5 202 aa4.85□□□□□ -1.63
TRAM1-203ENST00000520700 LUZP6Q538Z0 58 aa4.8□□□□□ -1.64
TRAM1-203ENST00000520700 KRTAP5-7Q6L8G8 165 aa4.62□□□□□ -1.67
TRAM1-203ENST00000520700 OBSCNQ5VST9 7968 aa4.57□□□□□ -1.68
TRAM1-203ENST00000520700 KRTAP5-8O75690 187 aa4.5□□□□□ -1.69
TRAM1-203ENST00000520700 LCE1EQ5T753 118 aa4.4□□□□□ -1.71
TRAM1-203ENST00000520700 KRTAP5-1Q6L8H4 278 aa4.38□□□□□ -1.71
TRAM1-203ENST00000520700 LCE3DQ9BYE3 92 aa4.31□□□□□ -1.72
TRAM1-203ENST00000520700 MUC5ACP98088 5654 aa4.31□□□□□ -1.72
TRAM1-203ENST00000520700 NDUFAF8A1L188 74 aa4.24□□□□□ -1.73
TRAM1-203ENST00000520700 LCE3EQ5T5B0 92 aa4.13□□□□□ -1.75
TRAM1-203ENST00000520700 MUC5BQ9HC84 5762 aaPredicted RBP4.1□□□□□ -1.75
TRAM1-203ENST00000520700 AHNAKQ09666 5890 aaKnown RBP4.08□□□□□ -1.76
TRAM1-203ENST00000520700 LCE1CQ5T751 118 aa4.06□□□□□ -1.76
TRAM1-203ENST00000520700 LCE1BQ5T7P3 118 aa4.06□□□□□ -1.76
TRAM1-203ENST00000520700 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.84□□□□□ -1.79
TRAM1-203ENST00000520700 KRTAP5-11Q6L8G4 156 aa3.68□□□□□ -1.82
TRAM1-203ENST00000520700 A0A0A0MQY5 61 aa3.62□□□□□ -1.83
TRAM1-203ENST00000520700 INE1O15225 51 aa3.57□□□□□ -1.84
TRAM1-203ENST00000520700 KRTAP21-2Q3LI59 83 aa3.47□□□□□ -1.85
TRAM1-203ENST00000520700 LCE1FQ5T754 118 aa3.46□□□□□ -1.86
TRAM1-203ENST00000520700 PRM1P04553 51 aa3.3□□□□□ -1.88
TRAM1-203ENST00000520700 KRTAP4-4Q9BYR3 166 aa3.2□□□□□ -1.9
TRAM1-203ENST00000520700 PHGR1C9JFL3 82 aa3.12□□□□□ -1.91
TRAM1-203ENST00000520700 MUC19Q7Z5P9 8384 aa2.78□□□□□ -1.96
TRAM1-203ENST00000520700 KRTAP21-1Q3LI58 79 aa2.13□□□□□ -2.07
TRAM1-203ENST00000520700 MUC16Q8WXI7 14507 aa1.99□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 491 ms