RNA–Protein interactions for RNA: ENST00000520140.5

VPS37A-206, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS37A, Length 2,102 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-206ENST00000520140 LCE3AQ5TA76 89 aa5.4□□□□□ -1.54
VPS37A-206ENST00000520140 A0A0A0MQY5 61 aa5.36□□□□□ -1.55
VPS37A-206ENST00000520140 KRTAP19-7Q3SYF9 63 aa5.32□□□□□ -1.56
VPS37A-206ENST00000520140 KRTAP19-5Q3LI72 72 aa5.31□□□□□ -1.56
VPS37A-206ENST00000520140 NEBP20929 6669 aa5.26□□□□□ -1.57
VPS37A-206ENST00000520140 SPRR2EP22531 72 aa5.25□□□□□ -1.57
VPS37A-206ENST00000520140 SPRR2BP35325 72 aa5.25□□□□□ -1.57
VPS37A-206ENST00000520140 SPRR2AP35326 72 aa5.25□□□□□ -1.57
VPS37A-206ENST00000520140 KRTAP23-1A1A580 65 aa5.23□□□□□ -1.57
VPS37A-206ENST00000520140 MT1EP04732 61 aa5.23□□□□□ -1.57
VPS37A-206ENST00000520140 LCE1AQ5T7P2 110 aa5.21□□□□□ -1.57
VPS37A-206ENST00000520140 SPRR5A0A1B0GTR4 108 aa5.2□□□□□ -1.58
VPS37A-206ENST00000520140 KRTAP12-3P60328 96 aa5.17□□□□□ -1.58
VPS37A-206ENST00000520140 KRTAP19-3Q7Z4W3 81 aa5.11□□□□□ -1.59
VPS37A-206ENST00000520140 MT1LQ93083 61 aa5.08□□□□□ -1.6
VPS37A-206ENST00000520140 SPRR2DP22532 72 aa5.06□□□□□ -1.6
VPS37A-206ENST00000520140 DSTQ03001 7570 aaKnown RBP5.06□□□□□ -1.6
VPS37A-206ENST00000520140 LCE5AQ5TCM9 118 aa5.05□□□□□ -1.6
VPS37A-206ENST00000520140 MT1GP13640 62 aa5.01□□□□□ -1.61
VPS37A-206ENST00000520140 MT1MQ8N339 61 aa4.96□□□□□ -1.62
VPS37A-206ENST00000520140 KRTAP20-1Q3LI63 56 aa4.95□□□□□ -1.62
VPS37A-206ENST00000520140 KRTAP4-7Q9BYR0 210 aa4.94□□□□□ -1.62
VPS37A-206ENST00000520140 KRTAP2-3P0C7H8 128 aa4.91□□□□□ -1.62
VPS37A-206ENST00000520140 KRTAP4-3Q9BYR4 195 aa4.91□□□□□ -1.62
VPS37A-206ENST00000520140 KRTAP2-4Q9BYR9 128 aa4.91□□□□□ -1.62
VPS37A-206ENST00000520140 LCE3BQ5TA77 95 aa4.89□□□□□ -1.63
VPS37A-206ENST00000520140 INE1O15225 51 aa4.8□□□□□ -1.64
VPS37A-206ENST00000520140 LCE3CQ5T5A8 94 aa4.8□□□□□ -1.64
VPS37A-206ENST00000520140 KRTAP2-2Q9BYT5 123 aa4.78□□□□□ -1.64
VPS37A-206ENST00000520140 KRTAP2-1Q9BYU5 128 aa4.78□□□□□ -1.64
VPS37A-206ENST00000520140 KRTAP19-4Q3LI73 84 aa4.75□□□□□ -1.65
VPS37A-206ENST00000520140 KRTAP5-3Q6L8H2 238 aa4.7□□□□□ -1.66
VPS37A-206ENST00000520140 KRTAP9-6A8MVA2 160 aa4.56□□□□□ -1.68
VPS37A-206ENST00000520140 KRTAP4-9Q9BYQ8 210 aa4.51□□□□□ -1.69
VPS37A-206ENST00000520140 KRTAP5-5Q701N2 237 aaPredicted RBP4.48□□□□□ -1.69
VPS37A-206ENST00000520140 KRTAP9-9Q9BYP9 154 aa4.46□□□□□ -1.7
VPS37A-206ENST00000520140 KRTAP9-4Q9BYQ2 154 aa4.46□□□□□ -1.7
VPS37A-206ENST00000520140 MT4P47944 62 aa4.45□□□□□ -1.7
VPS37A-206ENST00000520140 KRTAP5-4Q6L8H1 288 aa4.44□□□□□ -1.7
VPS37A-206ENST00000520140 LCE4AQ5TA78 99 aa4.43□□□□□ -1.7
VPS37A-206ENST00000520140 LCE1DQ5T752 114 aa4.4□□□□□ -1.7
VPS37A-206ENST00000520140 HMCN1Q96RW7 5635 aa4.38□□□□□ -1.71
VPS37A-206ENST00000520140 SYNE1Q8NF91 8797 aaKnown RBP4.38□□□□□ -1.71
VPS37A-206ENST00000520140 KRTAP4-2Q9BYR5 136 aa4.37□□□□□ -1.71
VPS37A-206ENST00000520140 KRTAP6-1Q3LI64 71 aa4.31□□□□□ -1.72
VPS37A-206ENST00000520140 MT1AP04731 61 aa4.3□□□□□ -1.72
VPS37A-206ENST00000520140 KRTAP12-4P60329 112 aa4.27□□□□□ -1.73
VPS37A-206ENST00000520140 KRTAP20-2Q3LI61 65 aa4.2□□□□□ -1.74
VPS37A-206ENST00000520140 KRTAP4-12Q9BQ66 201 aa4.15□□□□□ -1.74
VPS37A-206ENST00000520140 AHNAK2Q8IVF2 5795 aa4.04□□□□□ -1.76
VPS37A-206ENST00000520140 KRTAP6-2Q3LI66 62 aa4.04□□□□□ -1.76
VPS37A-206ENST00000520140 GPR98Q8WXG9 6306 aa4.01□□□□□ -1.77
VPS37A-206ENST00000520140 OBSCNQ5VST9 7968 aa3.97□□□□□ -1.77
VPS37A-206ENST00000520140 KRTAP5-2Q701N4 177 aa3.96□□□□□ -1.78
VPS37A-206ENST00000520140 MT3P25713 68 aa3.91□□□□□ -1.78
VPS37A-206ENST00000520140 KRTAP4-11Q9BYQ6 195 aa3.89□□□□□ -1.79
VPS37A-206ENST00000520140 KRTAP5-10Q6L8G5 202 aa3.88□□□□□ -1.79
VPS37A-206ENST00000520140 KRTAP5-7Q6L8G8 165 aa3.67□□□□□ -1.82
VPS37A-206ENST00000520140 KRTAP5-8O75690 187 aa3.59□□□□□ -1.83
VPS37A-206ENST00000520140 LCE3DQ9BYE3 92 aa3.55□□□□□ -1.84
VPS37A-206ENST00000520140 KRTAP5-1Q6L8H4 278 aa3.5□□□□□ -1.85
VPS37A-206ENST00000520140 LCE1EQ5T753 118 aa3.45□□□□□ -1.86
VPS37A-206ENST00000520140 MUC5ACP98088 5654 aa3.43□□□□□ -1.86
VPS37A-206ENST00000520140 LCE3EQ5T5B0 92 aa3.42□□□□□ -1.86
VPS37A-206ENST00000520140 PRM1P04553 51 aa3.38□□□□□ -1.87
VPS37A-206ENST00000520140 MUC5BQ9HC84 5762 aaPredicted RBP3.34□□□□□ -1.88
VPS37A-206ENST00000520140 LCE1BQ5T7P3 118 aa3.34□□□□□ -1.88
VPS37A-206ENST00000520140 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.31□□□□□ -1.88
VPS37A-206ENST00000520140 LCE1CQ5T751 118 aa3.23□□□□□ -1.89
VPS37A-206ENST00000520140 AHNAKQ09666 5890 aaKnown RBP3.21□□□□□ -1.9
VPS37A-206ENST00000520140 KRTAP5-11Q6L8G4 156 aa2.87□□□□□ -1.95
VPS37A-206ENST00000520140 KRTAP21-2Q3LI59 83 aa2.81□□□□□ -1.96
VPS37A-206ENST00000520140 KRTAP4-4Q9BYR3 166 aa2.69□□□□□ -1.98
VPS37A-206ENST00000520140 LCE1FQ5T754 118 aa2.66□□□□□ -1.98
VPS37A-206ENST00000520140 PHGR1C9JFL3 82 aa2.49□□□□□ -2.01
VPS37A-206ENST00000520140 MUC19Q7Z5P9 8384 aa2.4□□□□□ -2.03
VPS37A-206ENST00000520140 KRTAP21-1Q3LI58 79 aa2.17□□□□□ -2.06
VPS37A-206ENST00000520140 MUC16Q8WXI7 14507 aa1.57□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 162.7 ms