RNA–Protein interactions for RNA: ENST00000520133.5

COL13A1-212, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL13A1, Length 1,833 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-212ENST00000520133 MUC12Q9UKN1 5478 aa9.23□□□□□ -0.93
COL13A1-212ENST00000520133 MT1GP13640 62 aa9.21□□□□□ -0.93
COL13A1-212ENST00000520133 H3BS24 57 aa9.14□□□□□ -0.95
COL13A1-212ENST00000520133 SYNE2Q8WXH0 6885 aaKnown RBP9.12□□□□□ -0.95
COL13A1-212ENST00000520133 MT1MQ8N339 61 aa9.1□□□□□ -0.95
COL13A1-212ENST00000520133 KRTAP9-6A8MVA2 160 aa9.08□□□□□ -0.96
COL13A1-212ENST00000520133 KRTAP5-9P26371 169 aa9.06□□□□□ -0.96
COL13A1-212ENST00000520133 LCE5AQ5TCM9 118 aa9.05□□□□□ -0.96
COL13A1-212ENST00000520133 KRTAP9-6A0A140TA67 174 aa8.96□□□□□ -0.97
COL13A1-212ENST00000520133 KRTAP4-3Q9BYR4 195 aa8.94□□□□□ -0.98
COL13A1-212ENST00000520133 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.85□□□□□ -0.99
COL13A1-212ENST00000520133 LCE1AQ5T7P2 110 aa8.82□□□□□ -1
COL13A1-212ENST00000520133 KRTAP6-3Q3LI67 103 aa8.77□□□□□ -1.01
COL13A1-212ENST00000520133 A0A0A0MQY5 61 aa8.74□□□□□ -1.01
COL13A1-212ENST00000520133 SPRR2EP22531 72 aa8.74□□□□□ -1.01
COL13A1-212ENST00000520133 SPRR2BP35325 72 aa8.74□□□□□ -1.01
COL13A1-212ENST00000520133 SPRR2AP35326 72 aa8.74□□□□□ -1.01
COL13A1-212ENST00000520133 MDN1Q9NU22 5596 aa8.74□□□□□ -1.01
COL13A1-212ENST00000520133 LOC100996750A0A140TA64 210 aa8.7□□□□□ -1.02
COL13A1-212ENST00000520133 DSTQ03001 7570 aaKnown RBP8.57□□□□□ -1.04
COL13A1-212ENST00000520133 KRTAP2-3P0C7H8 128 aa8.54□□□□□ -1.04
COL13A1-212ENST00000520133 KRTAP2-4Q9BYR9 128 aa8.54□□□□□ -1.04
COL13A1-212ENST00000520133 KRTAP2-1Q9BYU5 128 aa8.54□□□□□ -1.04
COL13A1-212ENST00000520133 SPRR2DP22532 72 aa8.41□□□□□ -1.06
COL13A1-212ENST00000520133 KRTAP9-7A8MTY7 169 aa8.26□□□□□ -1.09
COL13A1-212ENST00000520133 KRTAP5-5Q701N2 237 aaPredicted RBP8.15□□□□□ -1.1
COL13A1-212ENST00000520133 NEBP20929 6669 aa8.14□□□□□ -1.11
COL13A1-212ENST00000520133 INE1O15225 51 aa8.11□□□□□ -1.11
COL13A1-212ENST00000520133 MT1AP04731 61 aa8.11□□□□□ -1.11
COL13A1-212ENST00000520133 LCE3BQ5TA77 95 aa8.05□□□□□ -1.12
COL13A1-212ENST00000520133 KRTAP6-1Q3LI64 71 aa8.03□□□□□ -1.12
COL13A1-212ENST00000520133 SYNE1Q8NF91 8797 aaKnown RBP7.77□□□□□ -1.17
COL13A1-212ENST00000520133 KRTAP9-4Q9BYQ2 154 aa7.68□□□□□ -1.18
COL13A1-212ENST00000520133 KRTAP5-4Q6L8H1 288 aa7.64□□□□□ -1.19
COL13A1-212ENST00000520133 KRTAP12-4P60329 112 aa7.55□□□□□ -1.2
COL13A1-212ENST00000520133 KRTAP4-9Q9BYQ8 210 aa7.48□□□□□ -1.21
COL13A1-212ENST00000520133 KRTAP2-2Q9BYT5 123 aa7.48□□□□□ -1.21
COL13A1-212ENST00000520133 LCE4AQ5TA78 99 aa7.45□□□□□ -1.22
COL13A1-212ENST00000520133 KRTAP20-1Q3LI63 56 aa7.37□□□□□ -1.23
COL13A1-212ENST00000520133 KRTAP6-2Q3LI66 62 aa7.36□□□□□ -1.23
COL13A1-212ENST00000520133 MT3P25713 68 aa7.35□□□□□ -1.23
COL13A1-212ENST00000520133 MT4P47944 62 aa7.3□□□□□ -1.24
COL13A1-212ENST00000520133 LCE3DQ9BYE3 92 aa7.3□□□□□ -1.24
COL13A1-212ENST00000520133 KRTAP4-6Q9BYQ5 205 aa7.26□□□□□ -1.25
COL13A1-212ENST00000520133 KRTAP20-2Q3LI61 65 aa7.15□□□□□ -1.27
COL13A1-212ENST00000520133 LCE3EQ5T5B0 92 aa7.13□□□□□ -1.27
COL13A1-212ENST00000520133 LCE1DQ5T752 114 aa7.1□□□□□ -1.27
COL13A1-212ENST00000520133 HMCN1Q96RW7 5635 aa7.03□□□□□ -1.28
COL13A1-212ENST00000520133 KRTAP5-2Q701N4 177 aa6.98□□□□□ -1.29
COL13A1-212ENST00000520133 KRTAP5-3Q6L8H2 238 aa6.85□□□□□ -1.31
COL13A1-212ENST00000520133 OBSCNQ5VST9 7968 aa6.78□□□□□ -1.32
COL13A1-212ENST00000520133 PRM1P04553 51 aa6.36□□□□□ -1.39
COL13A1-212ENST00000520133 LCE1EQ5T753 118 aa6.29□□□□□ -1.4
COL13A1-212ENST00000520133 KRTAP4-11Q9BYQ6 195 aa6.13□□□□□ -1.43
COL13A1-212ENST00000520133 AHNAK2Q8IVF2 5795 aa6.05□□□□□ -1.44
COL13A1-212ENST00000520133 KRTAP5-1Q6L8H4 278 aa5.99□□□□□ -1.45
COL13A1-212ENST00000520133 LCE1BQ5T7P3 118 aa5.94□□□□□ -1.46
COL13A1-212ENST00000520133 MUC5ACP98088 5654 aa5.94□□□□□ -1.46
COL13A1-212ENST00000520133 KRTAP5-10Q6L8G5 202 aa5.92□□□□□ -1.46
COL13A1-212ENST00000520133 KRTAP5-8O75690 187 aa5.87□□□□□ -1.47
COL13A1-212ENST00000520133 LCE1CQ5T751 118 aa5.87□□□□□ -1.47
COL13A1-212ENST00000520133 KRTAP4-2Q9BYR5 136 aa5.83□□□□□ -1.48
COL13A1-212ENST00000520133 KRTAP5-7Q6L8G8 165 aa5.74□□□□□ -1.49
COL13A1-212ENST00000520133 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.51□□□□□ -1.53
COL13A1-212ENST00000520133 GPR98Q8WXG9 6306 aa5.29□□□□□ -1.56
COL13A1-212ENST00000520133 KRTAP9-9Q9BYP9 154 aa5.25□□□□□ -1.57
COL13A1-212ENST00000520133 KRTAP21-2Q3LI59 83 aa5.24□□□□□ -1.57
COL13A1-212ENST00000520133 KRTAP5-11Q6L8G4 156 aa5.14□□□□□ -1.59
COL13A1-212ENST00000520133 MUC5BQ9HC84 5762 aaPredicted RBP5□□□□□ -1.61
COL13A1-212ENST00000520133 KRTAP4-12Q9BQ66 201 aa4.79□□□□□ -1.64
COL13A1-212ENST00000520133 KRTAP4-4Q9BYR3 166 aa4.66□□□□□ -1.66
COL13A1-212ENST00000520133 LCE1FQ5T754 118 aa4.56□□□□□ -1.68
COL13A1-212ENST00000520133 AHNAKQ09666 5890 aaKnown RBP4.43□□□□□ -1.7
COL13A1-212ENST00000520133 PHGR1C9JFL3 82 aa4.41□□□□□ -1.7
COL13A1-212ENST00000520133 MUC19Q7Z5P9 8384 aa4□□□□□ -1.77
COL13A1-212ENST00000520133 KRTAP21-1Q3LI58 79 aa3.93□□□□□ -1.78
COL13A1-212ENST00000520133 MUC16Q8WXI7 14507 aa2.85□□□□□ -1.95
Retrieved 77 of 20,778 RNA–protein pairs in 5.7 ms