RNA–Protein interactions for RNA: ENST00000519298.1

SNTB1-204, Transcript of syntrophin beta 1, humanhuman

TSL 3

Gene SNTB1, Length 414 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNTB1-204ENST00000519298 SPRR2GQ9BYE4 73 aa1.93□□□□□ -2.1
SNTB1-204ENST00000519298 LCE3CQ5T5A8 94 aa1.92□□□□□ -2.1
SNTB1-204ENST00000519298 KRTAP5-3Q6L8H2 238 aa1.92□□□□□ -2.1
SNTB1-204ENST00000519298 M0QZ58 72 aa1.91□□□□□ -2.1
SNTB1-204ENST00000519298 KRTAP19-8Q3LI54 63 aa1.9□□□□□ -2.11
SNTB1-204ENST00000519298 KRTAP12-4P60329 112 aa1.89□□□□□ -2.11
SNTB1-204ENST00000519298 FCGBPQ9Y6R7 5405 aaPredicted RBP1.89□□□□□ -2.11
SNTB1-204ENST00000519298 MT1BP07438 61 aa1.88□□□□□ -2.11
SNTB1-204ENST00000519298 KRTAP10-12P60413 245 aa1.87□□□□□ -2.11
SNTB1-204ENST00000519298 KRTAP10-7P60409 375 aaPredicted RBP1.85□□□□□ -2.11
SNTB1-204ENST00000519298 FSIP2Q5CZC0 6907 aa1.85□□□□□ -2.11
SNTB1-204ENST00000519298 KRTAP19-6Q3LI70 58 aa1.81□□□□□ -2.12
SNTB1-204ENST00000519298 MT1XP80297 61 aa1.8□□□□□ -2.12
SNTB1-204ENST00000519298 KMT2DO14686 5537 aa1.79□□□□□ -2.12
SNTB1-204ENST00000519298 KRTAP10-5P60370 271 aa1.79□□□□□ -2.12
SNTB1-204ENST00000519298 CRCT1Q9UGL9 99 aa1.77□□□□□ -2.13
SNTB1-204ENST00000519298 LCE3EQ5T5B0 92 aa1.76□□□□□ -2.13
SNTB1-204ENST00000519298 MUC12Q9UKN1 5478 aa1.7□□□□□ -2.14
SNTB1-204ENST00000519298 MDN1Q9NU22 5596 aa1.7□□□□□ -2.14
SNTB1-204ENST00000519298 SYNE2Q8WXH0 6885 aaKnown RBP1.7□□□□□ -2.14
SNTB1-204ENST00000519298 MACF1Q9UPN3 7388 aaKnown RBP1.69□□□□□ -2.14
SNTB1-204ENST00000519298 TNP1P09430 55 aa1.69□□□□□ -2.14
SNTB1-204ENST00000519298 LCE3DQ9BYE3 92 aa1.66□□□□□ -2.14
SNTB1-204ENST00000519298 KRTAP12-3P60328 96 aa1.64□□□□□ -2.15
SNTB1-204ENST00000519298 LCE3AQ5TA76 89 aa1.64□□□□□ -2.15
SNTB1-204ENST00000519298 KRTAP2-3P0C7H8 128 aa1.63□□□□□ -2.15
SNTB1-204ENST00000519298 KRTAP2-4Q9BYR9 128 aa1.63□□□□□ -2.15
SNTB1-204ENST00000519298 KRTAP2-1Q9BYU5 128 aa1.63□□□□□ -2.15
SNTB1-204ENST00000519298 KRTAP19-7Q3SYF9 63 aa1.62□□□□□ -2.15
SNTB1-204ENST00000519298 NEBP20929 6669 aa1.61□□□□□ -2.15
SNTB1-204ENST00000519298 KRTAP5-9P26371 169 aa1.61□□□□□ -2.15
SNTB1-204ENST00000519298 KRTAP8-1Q8IUC2 63 aa1.61□□□□□ -2.15
SNTB1-204ENST00000519298 KRTAP19-5Q3LI72 72 aa1.59□□□□□ -2.15
SNTB1-204ENST00000519298 MT1EP04732 61 aa1.58□□□□□ -2.16
SNTB1-204ENST00000519298 SPRR2FQ96RM1 72 aa1.56□□□□□ -2.16
SNTB1-204ENST00000519298 MT1LQ93083 61 aa1.54□□□□□ -2.16
SNTB1-204ENST00000519298 KRTAP19-3Q7Z4W3 81 aa1.52□□□□□ -2.17
SNTB1-204ENST00000519298 MT1GP13640 62 aa1.49□□□□□ -2.17
SNTB1-204ENST00000519298 SPRR2EP22531 72 aa1.49□□□□□ -2.17
SNTB1-204ENST00000519298 SPRR2BP35325 72 aa1.49□□□□□ -2.17
SNTB1-204ENST00000519298 SPRR2AP35326 72 aa1.49□□□□□ -2.17
SNTB1-204ENST00000519298 MT1MQ8N339 61 aa1.49□□□□□ -2.17
SNTB1-204ENST00000519298 DSTQ03001 7570 aaKnown RBP1.47□□□□□ -2.17
SNTB1-204ENST00000519298 KRTAP4-3Q9BYR4 195 aa1.47□□□□□ -2.17
SNTB1-204ENST00000519298 SPRR2DP22532 72 aa1.44□□□□□ -2.18
SNTB1-204ENST00000519298 KRTAP9-6A8MVA2 160 aa1.43□□□□□ -2.18
SNTB1-204ENST00000519298 KRTAP20-1Q3LI63 56 aa1.43□□□□□ -2.18
SNTB1-204ENST00000519298 GPR98Q8WXG9 6306 aa1.42□□□□□ -2.18
SNTB1-204ENST00000519298 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.41□□□□□ -2.18
SNTB1-204ENST00000519298 PRM1P04553 51 aa1.4□□□□□ -2.19
SNTB1-204ENST00000519298 KRTAP5-11Q6L8G4 156 aa1.4□□□□□ -2.19
SNTB1-204ENST00000519298 KRTAP5-5Q701N2 237 aaPredicted RBP1.38□□□□□ -2.19
SNTB1-204ENST00000519298 HMCN1Q96RW7 5635 aa1.37□□□□□ -2.19
SNTB1-204ENST00000519298 KRTAP5-4Q6L8H1 288 aa1.34□□□□□ -2.19
SNTB1-204ENST00000519298 AHNAK2Q8IVF2 5795 aa1.31□□□□□ -2.2
SNTB1-204ENST00000519298 SYNE1Q8NF91 8797 aaKnown RBP1.31□□□□□ -2.2
SNTB1-204ENST00000519298 MT1AP04731 61 aa1.3□□□□□ -2.2
SNTB1-204ENST00000519298 KRTAP6-1Q3LI64 71 aa1.3□□□□□ -2.2
SNTB1-204ENST00000519298 LCE1CQ5T751 118 aa1.28□□□□□ -2.2
SNTB1-204ENST00000519298 LCE1BQ5T7P3 118 aa1.28□□□□□ -2.2
SNTB1-204ENST00000519298 MT4P47944 62 aa1.25□□□□□ -2.21
SNTB1-204ENST00000519298 KRTAP20-2Q3LI61 65 aa1.24□□□□□ -2.21
SNTB1-204ENST00000519298 KRTAP5-1Q6L8H4 278 aa1.23□□□□□ -2.21
SNTB1-204ENST00000519298 KRTAP5-2Q701N4 177 aa1.21□□□□□ -2.22
SNTB1-204ENST00000519298 KRTAP6-2Q3LI66 62 aa1.2□□□□□ -2.22
SNTB1-204ENST00000519298 KRTAP4-4Q9BYR3 166 aa1.19□□□□□ -2.22
SNTB1-204ENST00000519298 MUC5ACP98088 5654 aa1.17□□□□□ -2.22
SNTB1-204ENST00000519298 KRTAP5-10Q6L8G5 202 aa1.16□□□□□ -2.22
SNTB1-204ENST00000519298 KRTAP5-7Q6L8G8 165 aa1.14□□□□□ -2.23
SNTB1-204ENST00000519298 OBSCNQ5VST9 7968 aa1.13□□□□□ -2.23
SNTB1-204ENST00000519298 KRTAP21-1Q3LI58 79 aa1.07□□□□□ -2.24
SNTB1-204ENST00000519298 MUC5BQ9HC84 5762 aaPredicted RBP1.07□□□□□ -2.24
SNTB1-204ENST00000519298 AHNAKQ09666 5890 aaKnown RBP1.06□□□□□ -2.24
SNTB1-204ENST00000519298 KRTAP5-8O75690 187 aa1.05□□□□□ -2.24
SNTB1-204ENST00000519298 MUC19Q7Z5P9 8384 aa0.93□□□□□ -2.26
SNTB1-204ENST00000519298 KRTAP21-2Q3LI59 83 aa0.86□□□□□ -2.27
SNTB1-204ENST00000519298 PHGR1C9JFL3 82 aa0.75□□□□□ -2.29
SNTB1-204ENST00000519298 MUC16Q8WXI7 14507 aa0.52□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 5.9 ms