RNA–Protein interactions for RNA: ENST00000519132.5

CLK4-202, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-202ENST00000519132 MT1HP80294 61 aa3.08□□□□□ -1.92
CLK4-202ENST00000519132 FAT4Q6V0I7 4981 aa3.08□□□□□ -1.92
CLK4-202ENST00000519132 KRTAP9-6A8MVA2 160 aa3.05□□□□□ -1.92
CLK4-202ENST00000519132 M0R2T5 61 aa3.01□□□□□ -1.93
CLK4-202ENST00000519132 MT2AP02795 61 aa2.94□□□□□ -1.94
CLK4-202ENST00000519132 M0QZ58 72 aa2.92□□□□□ -1.94
CLK4-202ENST00000519132 MT1FP04733 61 aa2.92□□□□□ -1.94
CLK4-202ENST00000519132 KRTAP5-11Q6L8G4 156 aa2.88□□□□□ -1.95
CLK4-202ENST00000519132 SPRR2GQ9BYE4 73 aa2.88□□□□□ -1.95
CLK4-202ENST00000519132 FSIP2Q5CZC0 6907 aa2.84□□□□□ -1.96
CLK4-202ENST00000519132 KRTAP19-8Q3LI54 63 aa2.82□□□□□ -1.96
CLK4-202ENST00000519132 CRCT1Q9UGL9 99 aa2.82□□□□□ -1.96
CLK4-202ENST00000519132 KRTAP12-3P60328 96 aa2.81□□□□□ -1.96
CLK4-202ENST00000519132 MT1BP07438 61 aa2.76□□□□□ -1.97
CLK4-202ENST00000519132 USH2AO75445 5202 aa2.7□□□□□ -1.98
CLK4-202ENST00000519132 LCE3AQ5TA76 89 aa2.69□□□□□ -1.98
CLK4-202ENST00000519132 MT1XP80297 61 aa2.66□□□□□ -1.98
CLK4-202ENST00000519132 KRTAP19-6Q3LI70 58 aa2.65□□□□□ -1.98
CLK4-202ENST00000519132 SSPOA2VEC9 5147 aa2.63□□□□□ -1.99
CLK4-202ENST00000519132 TNP1P09430 55 aa2.57□□□□□ -2
CLK4-202ENST00000519132 KRTAP12-4P60329 112 aa2.57□□□□□ -2
CLK4-202ENST00000519132 HMCN1Q96RW7 5635 aa2.56□□□□□ -2
CLK4-202ENST00000519132 FCGBPQ9Y6R7 5405 aaPredicted RBP2.52□□□□□ -2.01
CLK4-202ENST00000519132 KRTAP5-1Q6L8H4 278 aa2.46□□□□□ -2.02
CLK4-202ENST00000519132 KRTAP5-5Q701N2 237 aaPredicted RBP2.44□□□□□ -2.02
CLK4-202ENST00000519132 KRTAP8-1Q8IUC2 63 aa2.44□□□□□ -2.02
CLK4-202ENST00000519132 MACF1Q9UPN3 7388 aaKnown RBP2.44□□□□□ -2.02
CLK4-202ENST00000519132 OBSCNQ5VST9 7968 aa2.43□□□□□ -2.02
CLK4-202ENST00000519132 GPR98Q8WXG9 6306 aa2.43□□□□□ -2.02
CLK4-202ENST00000519132 SYNE2Q8WXH0 6885 aaKnown RBP2.43□□□□□ -2.02
CLK4-202ENST00000519132 KMT2DO14686 5537 aa2.4□□□□□ -2.02
CLK4-202ENST00000519132 KRTAP19-7Q3SYF9 63 aa2.38□□□□□ -2.03
CLK4-202ENST00000519132 KRTAP19-5Q3LI72 72 aa2.37□□□□□ -2.03
CLK4-202ENST00000519132 NEBP20929 6669 aa2.37□□□□□ -2.03
CLK4-202ENST00000519132 KRTAP20-1Q3LI63 56 aa2.36□□□□□ -2.03
CLK4-202ENST00000519132 KRTAP5-9P26371 169 aa2.36□□□□□ -2.03
CLK4-202ENST00000519132 KRTAP2-3P0C7H8 128 aa2.35□□□□□ -2.03
CLK4-202ENST00000519132 KRTAP2-4Q9BYR9 128 aa2.35□□□□□ -2.03
CLK4-202ENST00000519132 KRTAP2-1Q9BYU5 128 aa2.35□□□□□ -2.03
CLK4-202ENST00000519132 MT1EP04732 61 aa2.34□□□□□ -2.04
CLK4-202ENST00000519132 SPRR2FQ96RM1 72 aa2.31□□□□□ -2.04
CLK4-202ENST00000519132 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.28□□□□□ -2.04
CLK4-202ENST00000519132 MT1LQ93083 61 aa2.28□□□□□ -2.04
CLK4-202ENST00000519132 KRTAP19-3Q7Z4W3 81 aa2.26□□□□□ -2.05
CLK4-202ENST00000519132 MT1GP13640 62 aa2.25□□□□□ -2.05
CLK4-202ENST00000519132 MUC12Q9UKN1 5478 aa2.24□□□□□ -2.05
CLK4-202ENST00000519132 SPRR2EP22531 72 aa2.21□□□□□ -2.06
CLK4-202ENST00000519132 SPRR2BP35325 72 aa2.21□□□□□ -2.06
CLK4-202ENST00000519132 SPRR2AP35326 72 aa2.21□□□□□ -2.06
CLK4-202ENST00000519132 MT1MQ8N339 61 aa2.2□□□□□ -2.06
CLK4-202ENST00000519132 MUC5BQ9HC84 5762 aaPredicted RBP2.19□□□□□ -2.06
CLK4-202ENST00000519132 MDN1Q9NU22 5596 aa2.18□□□□□ -2.06
CLK4-202ENST00000519132 MUC19Q7Z5P9 8384 aa2.14□□□□□ -2.07
CLK4-202ENST00000519132 SPRR2DP22532 72 aa2.13□□□□□ -2.07
CLK4-202ENST00000519132 KRTAP4-3Q9BYR4 195 aa2.11□□□□□ -2.07
CLK4-202ENST00000519132 LCE1CQ5T751 118 aa2.1□□□□□ -2.07
CLK4-202ENST00000519132 LCE1BQ5T7P3 118 aa2.1□□□□□ -2.07
CLK4-202ENST00000519132 DSTQ03001 7570 aaKnown RBP2.07□□□□□ -2.08
CLK4-202ENST00000519132 PRM1P04553 51 aa2.06□□□□□ -2.08
CLK4-202ENST00000519132 KRTAP5-4Q6L8H1 288 aa2.05□□□□□ -2.08
CLK4-202ENST00000519132 KRTAP4-4Q9BYR3 166 aa2.02□□□□□ -2.09
CLK4-202ENST00000519132 KRTAP5-7Q6L8G8 165 aa1.97□□□□□ -2.09
CLK4-202ENST00000519132 MT1AP04731 61 aa1.95□□□□□ -2.1
CLK4-202ENST00000519132 SYNE1Q8NF91 8797 aaKnown RBP1.94□□□□□ -2.1
CLK4-202ENST00000519132 KRTAP6-1Q3LI64 71 aa1.91□□□□□ -2.1
CLK4-202ENST00000519132 AHNAK2Q8IVF2 5795 aa1.88□□□□□ -2.11
CLK4-202ENST00000519132 AHNAKQ09666 5890 aaKnown RBP1.87□□□□□ -2.11
CLK4-202ENST00000519132 KRTAP5-10Q6L8G5 202 aa1.85□□□□□ -2.11
CLK4-202ENST00000519132 MT4P47944 62 aa1.83□□□□□ -2.12
CLK4-202ENST00000519132 KRTAP20-2Q3LI61 65 aa1.81□□□□□ -2.12
CLK4-202ENST00000519132 KRTAP5-2Q701N4 177 aa1.77□□□□□ -2.13
CLK4-202ENST00000519132 KRTAP6-2Q3LI66 62 aa1.76□□□□□ -2.13
CLK4-202ENST00000519132 MUC5ACP98088 5654 aa1.59□□□□□ -2.15
CLK4-202ENST00000519132 KRTAP21-2Q3LI59 83 aa1.54□□□□□ -2.16
CLK4-202ENST00000519132 KRTAP5-8O75690 187 aa1.53□□□□□ -2.16
CLK4-202ENST00000519132 KRTAP21-1Q3LI58 79 aa1.44□□□□□ -2.18
CLK4-202ENST00000519132 PHGR1C9JFL3 82 aa1.12□□□□□ -2.23
CLK4-202ENST00000519132 MUC16Q8WXI7 14507 aa0.75□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 61.9 ms