RNA–Protein interactions for RNA: ENST00000518855.5

CLINT1-202, Transcript of clathrin interactor 1, humanhuman

TSL 2

Gene CLINT1, Length 3,394 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-202ENST00000518855 KRTAP10-12P60413 245 aa2.16□□□□□ -2.06
CLINT1-202ENST00000518855 KRTAP4-4Q9BYR3 166 aa2.14□□□□□ -2.07
CLINT1-202ENST00000518855 KRTAP8-1Q8IUC2 63 aa2.13□□□□□ -2.07
CLINT1-202ENST00000518855 KRTAP19-8Q3LI54 63 aa2.12□□□□□ -2.07
CLINT1-202ENST00000518855 LCE3CQ5T5A8 94 aa2.12□□□□□ -2.07
CLINT1-202ENST00000518855 GPR98Q8WXG9 6306 aa2.11□□□□□ -2.07
CLINT1-202ENST00000518855 HMCN2Q8NDA2 5059 aa2.06□□□□□ -2.08
CLINT1-202ENST00000518855 LCE3AQ5TA76 89 aa2.06□□□□□ -2.08
CLINT1-202ENST00000518855 OBSCNQ5VST9 7968 aa2.06□□□□□ -2.08
CLINT1-202ENST00000518855 SSPOA2VEC9 5147 aa2.04□□□□□ -2.08
CLINT1-202ENST00000518855 MT1HP80294 61 aa2.03□□□□□ -2.08
CLINT1-202ENST00000518855 MT2AP02795 61 aa2.02□□□□□ -2.09
CLINT1-202ENST00000518855 MT1XP80297 61 aa2.02□□□□□ -2.09
CLINT1-202ENST00000518855 MT1BP07438 61 aa2.01□□□□□ -2.09
CLINT1-202ENST00000518855 MT1FP04733 61 aa2.01□□□□□ -2.09
CLINT1-202ENST00000518855 MUC2Q02817 5179 aa1.99□□□□□ -2.09
CLINT1-202ENST00000518855 KRTAP5-2Q701N4 177 aa1.98□□□□□ -2.09
CLINT1-202ENST00000518855 UBR4Q5T4S7 5183 aa1.98□□□□□ -2.09
CLINT1-202ENST00000518855 FAT4Q6V0I7 4981 aa1.98□□□□□ -2.09
CLINT1-202ENST00000518855 KRTAP12-3P60328 96 aa1.98□□□□□ -2.09
CLINT1-202ENST00000518855 MUC5BQ9HC84 5762 aaPredicted RBP1.97□□□□□ -2.09
CLINT1-202ENST00000518855 RNF213Q63HN8 5207 aa1.96□□□□□ -2.1
CLINT1-202ENST00000518855 LCE3EQ5T5B0 92 aa1.94□□□□□ -2.1
CLINT1-202ENST00000518855 FSIP2Q5CZC0 6907 aa1.93□□□□□ -2.1
CLINT1-202ENST00000518855 KRTAP10-10P60014 251 aa1.91□□□□□ -2.1
CLINT1-202ENST00000518855 KRTAP2-3P0C7H8 128 aa1.9□□□□□ -2.11
CLINT1-202ENST00000518855 KRTAP2-4Q9BYR9 128 aa1.9□□□□□ -2.11
CLINT1-202ENST00000518855 KRTAP2-1Q9BYU5 128 aa1.9□□□□□ -2.11
CLINT1-202ENST00000518855 CRCT1Q9UGL9 99 aa1.9□□□□□ -2.11
CLINT1-202ENST00000518855 KRTAP4-3Q9BYR4 195 aa1.89□□□□□ -2.11
CLINT1-202ENST00000518855 M0R2T5 61 aa1.85□□□□□ -2.11
CLINT1-202ENST00000518855 KRTAP19-5Q3LI72 72 aa1.85□□□□□ -2.11
CLINT1-202ENST00000518855 KRTAP19-7Q3SYF9 63 aa1.81□□□□□ -2.12
CLINT1-202ENST00000518855 KRTAP6-3Q3LI67 103 aa1.77□□□□□ -2.13
CLINT1-202ENST00000518855 USH2AO75445 5202 aa1.76□□□□□ -2.13
CLINT1-202ENST00000518855 MT1EP04732 61 aa1.76□□□□□ -2.13
CLINT1-202ENST00000518855 MT1LQ93083 61 aa1.76□□□□□ -2.13
CLINT1-202ENST00000518855 AHNAKQ09666 5890 aaKnown RBP1.73□□□□□ -2.13
CLINT1-202ENST00000518855 KRTAP5-8O75690 187 aa1.72□□□□□ -2.13
CLINT1-202ENST00000518855 KRTAP5-5Q701N2 237 aaPredicted RBP1.71□□□□□ -2.14
CLINT1-202ENST00000518855 KRTAP5-7Q6L8G8 165 aa1.7□□□□□ -2.14
CLINT1-202ENST00000518855 KRTAP20-1Q3LI63 56 aa1.68□□□□□ -2.14
CLINT1-202ENST00000518855 KMT2DO14686 5537 aa1.68□□□□□ -2.14
CLINT1-202ENST00000518855 KRTAP19-6Q3LI70 58 aa1.67□□□□□ -2.14
CLINT1-202ENST00000518855 NEBP20929 6669 aa1.65□□□□□ -2.14
CLINT1-202ENST00000518855 DSTQ03001 7570 aaKnown RBP1.64□□□□□ -2.15
CLINT1-202ENST00000518855 MT1AP04731 61 aa1.62□□□□□ -2.15
CLINT1-202ENST00000518855 MT1GP13640 62 aa1.62□□□□□ -2.15
CLINT1-202ENST00000518855 SYNE1Q8NF91 8797 aaKnown RBP1.61□□□□□ -2.15
CLINT1-202ENST00000518855 MT1MQ8N339 61 aa1.61□□□□□ -2.15
CLINT1-202ENST00000518855 KRTAP19-3Q7Z4W3 81 aa1.6□□□□□ -2.15
CLINT1-202ENST00000518855 LCE1CQ5T751 118 aa1.57□□□□□ -2.16
CLINT1-202ENST00000518855 LCE1BQ5T7P3 118 aa1.57□□□□□ -2.16
CLINT1-202ENST00000518855 KRTAP12-4P60329 112 aa1.55□□□□□ -2.16
CLINT1-202ENST00000518855 FCGBPQ9Y6R7 5405 aaPredicted RBP1.55□□□□□ -2.16
CLINT1-202ENST00000518855 KRTAP5-10Q6L8G5 202 aa1.53□□□□□ -2.16
CLINT1-202ENST00000518855 LCE3DQ9BYE3 92 aa1.53□□□□□ -2.16
CLINT1-202ENST00000518855 SYNE2Q8WXH0 6885 aaKnown RBP1.5□□□□□ -2.17
CLINT1-202ENST00000518855 MUC12Q9UKN1 5478 aa1.49□□□□□ -2.17
CLINT1-202ENST00000518855 KRTAP6-1Q3LI64 71 aa1.45□□□□□ -2.18
CLINT1-202ENST00000518855 MACF1Q9UPN3 7388 aaKnown RBP1.44□□□□□ -2.18
CLINT1-202ENST00000518855 AHNAK2Q8IVF2 5795 aa1.44□□□□□ -2.18
CLINT1-202ENST00000518855 SPRR2FQ96RM1 72 aa1.44□□□□□ -2.18
CLINT1-202ENST00000518855 MUC19Q7Z5P9 8384 aa1.41□□□□□ -2.18
CLINT1-202ENST00000518855 PRM1P04553 51 aa1.4□□□□□ -2.19
CLINT1-202ENST00000518855 SPRR2AP35326 72 aa1.35□□□□□ -2.19
CLINT1-202ENST00000518855 MDN1Q9NU22 5596 aa1.35□□□□□ -2.19
CLINT1-202ENST00000518855 KRTAP6-2Q3LI66 62 aa1.34□□□□□ -2.19
CLINT1-202ENST00000518855 SPRR2EP22531 72 aa1.32□□□□□ -2.2
CLINT1-202ENST00000518855 SPRR2BP35325 72 aa1.32□□□□□ -2.2
CLINT1-202ENST00000518855 SPRR2DP22532 72 aa1.27□□□□□ -2.21
CLINT1-202ENST00000518855 MUC5ACP98088 5654 aa1.24□□□□□ -2.21
CLINT1-202ENST00000518855 KRTAP21-2Q3LI59 83 aa1.17□□□□□ -2.22
CLINT1-202ENST00000518855 MT4P47944 62 aa1.13□□□□□ -2.23
CLINT1-202ENST00000518855 KRTAP20-2Q3LI61 65 aa1.13□□□□□ -2.23
CLINT1-202ENST00000518855 KRTAP21-1Q3LI58 79 aa1□□□□□ -2.25
CLINT1-202ENST00000518855 PHGR1C9JFL3 82 aa0.77□□□□□ -2.29
CLINT1-202ENST00000518855 MUC16Q8WXI7 14507 aa0.68□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 30.6 ms